Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021121
         (726 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY084151-1|AAL89889.1|  272|Drosophila melanogaster RE31520p pro...   137   1e-32
AE014297-698|AAF54193.2|  272|Drosophila melanogaster CG9667-PA ...   137   1e-32
AE014297-4284|ABI31213.1|  649|Drosophila melanogaster CG33553-P...    34   0.23 

>AY084151-1|AAL89889.1|  272|Drosophila melanogaster RE31520p
           protein.
          Length = 272

 Score =  137 bits (332), Expect = 1e-32
 Identities = 61/72 (84%), Positives = 65/72 (90%)
 Frame = +2

Query: 509 EFRIRDLNDEINKLMREKRHWEVQIKSLGGPDHARVGPKMLDQDGKEVPGNRGYKYFGAA 688
           EFRIRDLNDEINKL+REKRHWE QI SLGGP + R GPKM D +G+EVPGNRGYKYFGAA
Sbjct: 67  EFRIRDLNDEINKLLREKRHWENQISSLGGPHYRRYGPKMFDAEGREVPGNRGYKYFGAA 126

Query: 689 KDLPGVRELFEQ 724
           KDLPGVRELFEQ
Sbjct: 127 KDLPGVRELFEQ 138



 Score =  110 bits (265), Expect = 2e-24
 Identities = 52/67 (77%), Positives = 63/67 (94%)
 Frame = +3

Query: 309 MARNAEKAMTTLARWRAAQVQEAGGQRERRPYLASECNDLPQAEKWRLQIVREIAKKVAQ 488
           MARNAEKAMTTLARWRAA+  E+G ++ERRPYLASEC+DLP+ EK+RL+I+R+I+KKVAQ
Sbjct: 1   MARNAEKAMTTLARWRAAKEVESG-EKERRPYLASECHDLPRCEKFRLEIIRDISKKVAQ 59

Query: 489 IQNAGLG 509
           IQNAGLG
Sbjct: 60  IQNAGLG 66


>AE014297-698|AAF54193.2|  272|Drosophila melanogaster CG9667-PA
           protein.
          Length = 272

 Score =  137 bits (332), Expect = 1e-32
 Identities = 61/72 (84%), Positives = 65/72 (90%)
 Frame = +2

Query: 509 EFRIRDLNDEINKLMREKRHWEVQIKSLGGPDHARVGPKMLDQDGKEVPGNRGYKYFGAA 688
           EFRIRDLNDEINKL+REKRHWE QI SLGGP + R GPKM D +G+EVPGNRGYKYFGAA
Sbjct: 67  EFRIRDLNDEINKLLREKRHWENQISSLGGPHYRRYGPKMFDAEGREVPGNRGYKYFGAA 126

Query: 689 KDLPGVRELFEQ 724
           KDLPGVRELFEQ
Sbjct: 127 KDLPGVRELFEQ 138



 Score =  110 bits (265), Expect = 2e-24
 Identities = 52/67 (77%), Positives = 63/67 (94%)
 Frame = +3

Query: 309 MARNAEKAMTTLARWRAAQVQEAGGQRERRPYLASECNDLPQAEKWRLQIVREIAKKVAQ 488
           MARNAEKAMTTLARWRAA+  E+G ++ERRPYLASEC+DLP+ EK+RL+I+R+I+KKVAQ
Sbjct: 1   MARNAEKAMTTLARWRAAKEVESG-EKERRPYLASECHDLPRCEKFRLEIIRDISKKVAQ 59

Query: 489 IQNAGLG 509
           IQNAGLG
Sbjct: 60  IQNAGLG 66


>AE014297-4284|ABI31213.1|  649|Drosophila melanogaster CG33553-PG,
           isoform G protein.
          Length = 649

 Score = 33.9 bits (74), Expect = 0.23
 Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = -1

Query: 441 SQLVANHYILMQ-GTDVVLAGLPLPELVPHANVLVLSLLSLRFWPW 307
           SQ VA+H+   Q    + +  LP P +V H   L+LS  SLRF P+
Sbjct: 213 SQQVADHFESSQIPCYIKMRDLPAPPVVDHCRDLILSSCSLRFMPY 258


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,180,027
Number of Sequences: 53049
Number of extensions: 707260
Number of successful extensions: 2414
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2411
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)