Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021121
         (726 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72510-2|CAA96652.1|  267|Caenorhabditis elegans Hypothetical pr...   100   2e-21
U97191-3|AAB52430.2|  133|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z84574-8|CAE54891.1|  921|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z81061-1|CAB02934.3|  436|Caenorhabditis elegans Hypothetical pr...    28   5.9  
AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical...    28   5.9  
AL022593-4|CAE54889.1|  921|Caenorhabditis elegans Hypothetical ...    28   5.9  

>Z72510-2|CAA96652.1|  267|Caenorhabditis elegans Hypothetical
           protein F53B7.3 protein.
          Length = 267

 Score = 99.5 bits (237), Expect = 2e-21
 Identities = 43/72 (59%), Positives = 56/72 (77%)
 Frame = +2

Query: 509 EFRIRDLNDEINKLMREKRHWEVQIKSLGGPDHARVGPKMLDQDGKEVPGNRGYKYFGAA 688
           EF++RDLNDE+N+L++ K  WE +I+ LGG D+ +   K LD  G+E   +RGYKYFGAA
Sbjct: 68  EFKLRDLNDEVNRLIKLKHAWEQRIRELGGTDYRKYAQKELDAIGRETGNSRGYKYFGAA 127

Query: 689 KDLPGVRELFEQ 724
           KDLPGVRELFE+
Sbjct: 128 KDLPGVRELFEK 139



 Score = 77.8 bits (183), Expect = 7e-15
 Identities = 36/67 (53%), Positives = 47/67 (70%)
 Frame = +3

Query: 309 MARNAEKAMTTLARWRAAQVQEAGGQRERRPYLASECNDLPQAEKWRLQIVREIAKKVAQ 488
           MARNAEKAMT LARWR  + +E  G   RRP+   +C +L  AE++R +IVR+ +KK+  
Sbjct: 1   MARNAEKAMTALARWRRMKEEEERGPIARRPHDVKDCRNLSDAERFRREIVRDASKKITA 60

Query: 489 IQNAGLG 509
           IQN GLG
Sbjct: 61  IQNPGLG 67


>U97191-3|AAB52430.2|  133|Caenorhabditis elegans Hypothetical
           protein F53F10.3 protein.
          Length = 133

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -1

Query: 687 AAPKYLYPRLPGTSFPSWSNILGP 616
           A  K++YP LP  + P+W++  GP
Sbjct: 14  AGDKFVYPVLPAFAKPAWNHAAGP 37


>Z84574-8|CAE54891.1|  921|Caenorhabditis elegans Hypothetical
           protein F33E2.2b protein.
          Length = 921

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -2

Query: 719 RIALARRVNPLQLQSICIPGCPALLSRPGPTF*DRLEHDRGRPKI 585
           RIA  RRV+    +S  +PG P   +R  P+   R+ H R   K+
Sbjct: 639 RIASRRRVSTSVNKSTAVPGQPVFFTRDSPS---RVPHARSSSKL 680


>Z81061-1|CAB02934.3|  436|Caenorhabditis elegans Hypothetical
           protein F14H8.1 protein.
          Length = 436

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -2

Query: 293 YSFGFWDQDHSNFIKLYFKVE 231
           Y  G+WD+D+SN ++L+  +E
Sbjct: 401 YKGGYWDRDYSNCLELFESLE 421


>AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical
           protein Y111B2A.14 protein.
          Length = 1481

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +2

Query: 311 GQKRRESNDNTSTLACGTSSGSGRPARTTSVPCIRM 418
           G+K  +S+D++S+ +  +   +G P  T + P IRM
Sbjct: 168 GEKSSKSSDSSSSSSSDSEDAAGPPRMTGAPPSIRM 203


>AL022593-4|CAE54889.1|  921|Caenorhabditis elegans Hypothetical
           protein F33E2.2b protein.
          Length = 921

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -2

Query: 719 RIALARRVNPLQLQSICIPGCPALLSRPGPTF*DRLEHDRGRPKI 585
           RIA  RRV+    +S  +PG P   +R  P+   R+ H R   K+
Sbjct: 639 RIASRRRVSTSVNKSTAVPGQPVFFTRDSPS---RVPHARSSSKL 680


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,242,651
Number of Sequences: 27780
Number of extensions: 380799
Number of successful extensions: 1402
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1400
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)