Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021121
(726 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 25 0.73
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 25 0.73
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 25 0.73
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 25 0.73
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 25 0.73
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 25 0.73
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 25 0.73
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 25 0.73
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 22 6.8
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 21 9.0
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 21 9.0
AY343324-1|AAQ21381.1| 156|Apis mellifera vacuolar H+ ATP synth... 21 9.0
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 21 9.0
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 9.0
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.0 bits (52), Expect = 0.73
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +2
Query: 461 QRNCEKSGTNTECRSREFRIRDLNDEINKLMREKRHWEVQIKSLGGPDHARVGPKMLDQD 640
Q E S T R++E R+R + + + RE+ H ++ K + + R K L +
Sbjct: 17 QSRSEDSETGLRSRTQEERLRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKR 76
Query: 641 GK-EVPGNRG 667
K P +RG
Sbjct: 77 SKSRSPESRG 86
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.0 bits (52), Expect = 0.73
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +2
Query: 461 QRNCEKSGTNTECRSREFRIRDLNDEINKLMREKRHWEVQIKSLGGPDHARVGPKMLDQD 640
Q E S T R++E R+R + + + RE+ H ++ K + + R K L +
Sbjct: 17 QSRSEDSETGLRSRTQEERLRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKR 76
Query: 641 GK-EVPGNRG 667
K P +RG
Sbjct: 77 SKSRSPESRG 86
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.0 bits (52), Expect = 0.73
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +2
Query: 461 QRNCEKSGTNTECRSREFRIRDLNDEINKLMREKRHWEVQIKSLGGPDHARVGPKMLDQD 640
Q E S T R++E R+R + + + RE+ H ++ K + + R K L +
Sbjct: 17 QSRSEDSETGLRSRTQEERLRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKR 76
Query: 641 GK-EVPGNRG 667
K P +RG
Sbjct: 77 SKSRSPESRG 86
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.0 bits (52), Expect = 0.73
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +2
Query: 461 QRNCEKSGTNTECRSREFRIRDLNDEINKLMREKRHWEVQIKSLGGPDHARVGPKMLDQD 640
Q E S T R++E R+R + + + RE+ H ++ K + + R K L +
Sbjct: 17 QSRSEDSETGLRSRTQEERLRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKR 76
Query: 641 GK-EVPGNRG 667
K P +RG
Sbjct: 77 SKSRSPESRG 86
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.0 bits (52), Expect = 0.73
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +2
Query: 461 QRNCEKSGTNTECRSREFRIRDLNDEINKLMREKRHWEVQIKSLGGPDHARVGPKMLDQD 640
Q E S T R++E R+R + + + RE+ H ++ K + + R K L +
Sbjct: 17 QSRSEDSETGLRSRTQEERLRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKR 76
Query: 641 GK-EVPGNRG 667
K P +RG
Sbjct: 77 SKSRSPESRG 86
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.0 bits (52), Expect = 0.73
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +2
Query: 461 QRNCEKSGTNTECRSREFRIRDLNDEINKLMREKRHWEVQIKSLGGPDHARVGPKMLDQD 640
Q E S T R++E R+R + + + RE+ H ++ K + + R K L +
Sbjct: 17 QSRSEDSETGLRSRTQEERLRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKR 76
Query: 641 GK-EVPGNRG 667
K P +RG
Sbjct: 77 SKSRSPESRG 86
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 25.0 bits (52), Expect = 0.73
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +2
Query: 461 QRNCEKSGTNTECRSREFRIRDLNDEINKLMREKRHWEVQIKSLGGPDHARVGPKMLDQD 640
Q E S T R++E R+R + + + RE+ H ++ K + + R K L +
Sbjct: 17 QSRSEDSETGLRSRTQEERLRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKR 76
Query: 641 GK-EVPGNRG 667
K P +RG
Sbjct: 77 SKSRSPESRG 86
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 25.0 bits (52), Expect = 0.73
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +2
Query: 461 QRNCEKSGTNTECRSREFRIRDLNDEINKLMREKRHWEVQIKSLGGPDHARVGPKMLDQD 640
Q E S T R++E R+R + + + RE+ H ++ K + + R K L +
Sbjct: 17 QSRSEDSETGLRSRTQEERLRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKR 76
Query: 641 GK-EVPGNRG 667
K P +RG
Sbjct: 77 SKSRSPESRG 86
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 21.8 bits (44), Expect = 6.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 456 SVTSTSQLVANHYILMQGTDVVLAGL 379
+V+S + Y L TD+VLAGL
Sbjct: 18 TVSSGERDTRTEYYLPNWTDLVLAGL 43
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 21 SLVQNCLNIWFYRT 62
SLV NC IW + T
Sbjct: 71 SLVGNCCVIWIFST 84
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 178 KYVTTEIDEIQLYL 137
KYV ID +QLY+
Sbjct: 472 KYVAMVIDRLQLYI 485
>AY343324-1|AAQ21381.1| 156|Apis mellifera vacuolar H+ ATP synthase
16 kDa proteolipidsubunit protein.
Length = 156
Score = 21.4 bits (43), Expect = 9.0
Identities = 12/46 (26%), Positives = 18/46 (39%)
Frame = -1
Query: 498 HSVFVPLFSQFL*QSVTSTSQLVANHYILMQGTDVVLAGLPLPELV 361
H ++ P F S S L A + GT + + PEL+
Sbjct: 6 HPIYAPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELI 51
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 21 SLVQNCLNIWFYRT 62
SLV NC IW + T
Sbjct: 71 SLVGNCCVIWIFST 84
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.4 bits (43), Expect = 9.0
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = -3
Query: 508 PRPAFCICATFFAISLTICNLHFSAC--GKSL 419
PR +CA+ I C LH +AC G SL
Sbjct: 111 PRRHRPVCASNGKIYANHCELHRAACHSGSSL 142
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,278
Number of Sequences: 438
Number of extensions: 4821
Number of successful extensions: 26
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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