Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021120
         (825 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...   108   2e-25
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    99   2e-22

>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
            protein.
          Length = 849

 Score =  108 bits (259), Expect = 2e-25
 Identities = 48/76 (63%), Positives = 57/76 (75%)
 Frame = +3

Query: 255  GLMSNDYQGGIFLYVVFAGWAAISVSILVLMEGLSAFLHTLRLHWVEFQSKFYGGEGYLF 434
            GL    Y+G I LY VF  W+  +++ILV+MEGLSAFLHTLRLHWVEF SKFY G GY F
Sbjct: 774  GLKQTSYKGAIMLYFVFGAWSLFTLAILVMMEGLSAFLHTLRLHWVEFMSKFYEGLGYGF 833

Query: 435  QPFSFEIILDSAGQAE 482
            QPFSF++I+DS    E
Sbjct: 834  QPFSFKLIIDSDDDLE 849



 Score = 98.7 bits (235), Expect = 2e-22
 Identities = 43/59 (72%), Positives = 50/59 (84%)
 Frame = +1

Query: 73  PVPASGHHDEEITEVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHAQLAEVAWNMLL 249
           P P   H DE + E+FIHQAIHTIE+VL +VSHTASYLRLWALSLAHA+L+EV WNM+L
Sbjct: 713 PKPHDSHDDEPMAEIFIHQAIHTIEYVLSTVSHTASYLRLWALSLAHAELSEVLWNMVL 771


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 98.7 bits (235), Expect = 2e-22
 Identities = 43/70 (61%), Positives = 55/70 (78%)
 Frame = +3

Query: 255 GLMSNDYQGGIFLYVVFAGWAAISVSILVLMEGLSAFLHTLRLHWVEFQSKFYGGEGYLF 434
           GL ++ Y G I +++VF  W+ +++ ILV MEGLSAFLHTLRLHWVEF SKFY G GY F
Sbjct: 734 GLRNDSYVGAIMIWLVFWPWSVLTIGILVGMEGLSAFLHTLRLHWVEFMSKFYEGLGYAF 793

Query: 435 QPFSFEIILD 464
           +PFSF+ IL+
Sbjct: 794 KPFSFKAILE 803



 Score = 91.5 bits (217), Expect = 3e-20
 Identities = 39/56 (69%), Positives = 52/56 (92%), Gaps = 1/56 (1%)
 Frame = +1

Query: 82  ASGHHDEE-ITEVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHAQLAEVAWNML 246
           +S HHD+E ++E+FIHQAIHTIE++L ++SHTASYLRLWALSLAHA+L+EV +NM+
Sbjct: 675 SSNHHDDEPMSEIFIHQAIHTIEYILSTISHTASYLRLWALSLAHAELSEVLYNMV 730


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 679,970
Number of Sequences: 2352
Number of extensions: 12981
Number of successful extensions: 59
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87734433
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)