Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021120
(825 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC109305-1|AAI09306.1| 840|Homo sapiens ATPase, H+ transporting... 96 1e-19
BC109304-1|AAI09305.1| 840|Homo sapiens ATPase, H+ transporting... 96 1e-19
AK055789-1|BAB71014.1| 513|Homo sapiens protein ( Homo sapiens ... 96 1e-19
AF245517-1|AAG11415.1| 840|Homo sapiens vacuolar proton pump 11... 96 1e-19
Z71460-1|CAA96077.1| 831|Homo sapiens vacuolar-type H(+)-ATPase... 91 6e-18
L78933-1|AAL77442.1| 831|Homo sapiens vacuolar-type H(+)-ATPase... 91 6e-18
BC032398-1|AAH32398.1| 837|Homo sapiens ATP6V0A1 protein protein. 91 6e-18
AL137683-1|CAB70874.1| 163|Homo sapiens hypothetical protein pr... 91 6e-18
AK223554-1|BAD97274.1| 831|Homo sapiens ATPase, H+ transporting... 91 6e-18
U45285-1|AAA97878.1| 829|Homo sapiens specific 116-kDa vacuolar... 82 3e-15
BC032465-1|AAH32465.1| 830|Homo sapiens T-cell, immune regulato... 82 3e-15
BC018133-1|AAH18133.1| 830|Homo sapiens T-cell, immune regulato... 82 3e-15
AF033033-1|AAD31081.2| 614|Homo sapiens TIRC7 protein protein. 82 3e-15
AF025374-1|AAC35742.1| 614|Homo sapiens TIRC7 protein. 82 3e-15
BC068531-1|AAH68531.1| 856|Homo sapiens ATPase, H+ transporting... 78 3e-14
AF112972-1|AAD04632.1| 856|Homo sapiens TJ6 protein. 78 3e-14
AF497545-1|AAM18704.1| 61|Homo sapiens T-cell immune regulator... 66 1e-10
AY548971-1|AAS59838.1| 44|Homo sapiens T-cell immune regulator... 33 0.95
>BC109305-1|AAI09306.1| 840|Homo sapiens ATPase, H+ transporting,
lysosomal V0 subunit a4 protein.
Length = 840
Score = 96.3 bits (229), Expect = 1e-19
Identities = 41/74 (55%), Positives = 58/74 (78%)
Frame = +3
Query: 255 GLMSNDYQGGIFLYVVFAGWAAISVSILVLMEGLSAFLHTLRLHWVEFQSKFYGGEGYLF 434
GL + + G + ++++FA +A ++V+IL++MEGLSAFLH LRLHWVEFQ+KFY G+GY F
Sbjct: 766 GLQTRGWGGIVGVFIIFAVFAVLTVAILLIMEGLSAFLHALRLHWVEFQNKFYVGDGYKF 825
Query: 435 QPFSFEIILDSAGQ 476
PFSF+ ILD +
Sbjct: 826 SPFSFKHILDGTAE 839
Score = 82.2 bits (194), Expect = 2e-15
Identities = 37/54 (68%), Positives = 45/54 (83%), Gaps = 2/54 (3%)
Frame = +1
Query: 94 HDEEIT--EVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHAQLAEVAWNMLL 249
H EE +VF+HQAIHTIE+ LG +S+TASYLRLWALSLAHAQL+EV W M++
Sbjct: 710 HGEEFNFGDVFVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWTMVM 763
>BC109304-1|AAI09305.1| 840|Homo sapiens ATPase, H+ transporting,
lysosomal V0 subunit a4 protein.
Length = 840
Score = 96.3 bits (229), Expect = 1e-19
Identities = 41/74 (55%), Positives = 58/74 (78%)
Frame = +3
Query: 255 GLMSNDYQGGIFLYVVFAGWAAISVSILVLMEGLSAFLHTLRLHWVEFQSKFYGGEGYLF 434
GL + + G + ++++FA +A ++V+IL++MEGLSAFLH LRLHWVEFQ+KFY G+GY F
Sbjct: 766 GLQTRGWGGIVGVFIIFAVFAVLTVAILLIMEGLSAFLHALRLHWVEFQNKFYVGDGYKF 825
Query: 435 QPFSFEIILDSAGQ 476
PFSF+ ILD +
Sbjct: 826 SPFSFKHILDGTAE 839
Score = 82.2 bits (194), Expect = 2e-15
Identities = 37/54 (68%), Positives = 45/54 (83%), Gaps = 2/54 (3%)
Frame = +1
Query: 94 HDEEIT--EVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHAQLAEVAWNMLL 249
H EE +VF+HQAIHTIE+ LG +S+TASYLRLWALSLAHAQL+EV W M++
Sbjct: 710 HGEEFNFGDVFVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWTMVM 763
>AK055789-1|BAB71014.1| 513|Homo sapiens protein ( Homo sapiens
cDNA FLJ31227 fis, clone KIDNE2004411, highly similar to
Homo sapiens vacuolar proton pump 116 kDa accessory
subunit ).
Length = 513
Score = 96.3 bits (229), Expect = 1e-19
Identities = 41/74 (55%), Positives = 58/74 (78%)
Frame = +3
Query: 255 GLMSNDYQGGIFLYVVFAGWAAISVSILVLMEGLSAFLHTLRLHWVEFQSKFYGGEGYLF 434
GL + + G + ++++FA +A ++V+IL++MEGLSAFLH LRLHWVEFQ+KFY G+GY F
Sbjct: 439 GLQTRGWGGIVGVFIIFAVFAVLTVAILLIMEGLSAFLHALRLHWVEFQNKFYVGDGYKF 498
Query: 435 QPFSFEIILDSAGQ 476
PFSF+ ILD +
Sbjct: 499 SPFSFKHILDGTAE 512
Score = 82.2 bits (194), Expect = 2e-15
Identities = 37/54 (68%), Positives = 45/54 (83%), Gaps = 2/54 (3%)
Frame = +1
Query: 94 HDEEIT--EVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHAQLAEVAWNMLL 249
H EE +VF+HQAIHTIE+ LG +S+TASYLRLWALSLAHAQL+EV W M++
Sbjct: 383 HGEEFNFGDVFVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWTMVM 436
>AF245517-1|AAG11415.1| 840|Homo sapiens vacuolar proton pump 116
kDa accessory subunit protein.
Length = 840
Score = 96.3 bits (229), Expect = 1e-19
Identities = 41/74 (55%), Positives = 58/74 (78%)
Frame = +3
Query: 255 GLMSNDYQGGIFLYVVFAGWAAISVSILVLMEGLSAFLHTLRLHWVEFQSKFYGGEGYLF 434
GL + + G + ++++FA +A ++V+IL++MEGLSAFLH LRLHWVEFQ+KFY G+GY F
Sbjct: 766 GLQTRGWGGIVGVFIIFAVFAVLTVAILLIMEGLSAFLHALRLHWVEFQNKFYVGDGYKF 825
Query: 435 QPFSFEIILDSAGQ 476
PFSF+ ILD +
Sbjct: 826 SPFSFKHILDGTAE 839
Score = 82.2 bits (194), Expect = 2e-15
Identities = 37/54 (68%), Positives = 45/54 (83%), Gaps = 2/54 (3%)
Frame = +1
Query: 94 HDEEIT--EVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHAQLAEVAWNMLL 249
H EE +VF+HQAIHTIE+ LG +S+TASYLRLWALSLAHAQL+EV W M++
Sbjct: 710 HGEEFNFGDVFVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWTMVM 763
>Z71460-1|CAA96077.1| 831|Homo sapiens vacuolar-type H(+)-ATPase
115 kDa subunit protein.
Length = 831
Score = 90.6 bits (215), Expect = 6e-18
Identities = 40/68 (58%), Positives = 50/68 (73%)
Frame = +3
Query: 255 GLMSNDYQGGIFLYVVFAGWAAISVSILVLMEGLSAFLHTLRLHWVEFQSKFYGGEGYLF 434
GL GG+ L+ F +A ++V+IL++MEGLSAFLH LRLHWVEFQ+KFY G G+ F
Sbjct: 757 GLSVKSLAGGLVLFFFFTAFATLTVAILLIMEGLSAFLHALRLHWVEFQNKFYSGTGFKF 816
Query: 435 QPFSFEII 458
PFSFE I
Sbjct: 817 LPFSFEHI 824
Score = 73.3 bits (172), Expect = 1e-12
Identities = 30/46 (65%), Positives = 39/46 (84%)
Frame = +1
Query: 112 EVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHAQLAEVAWNMLL 249
+ +HQAIHTIE+ LG +S+TASYLRLWALSLAHA ++EV W M++
Sbjct: 709 DTMVHQAIHTIEYCLGCISNTASYLRLWALSLAHAHVSEVLWTMVI 754
>L78933-1|AAL77442.1| 831|Homo sapiens vacuolar-type H(+)-ATPase
protein.
Length = 831
Score = 90.6 bits (215), Expect = 6e-18
Identities = 40/68 (58%), Positives = 50/68 (73%)
Frame = +3
Query: 255 GLMSNDYQGGIFLYVVFAGWAAISVSILVLMEGLSAFLHTLRLHWVEFQSKFYGGEGYLF 434
GL GG+ L+ F +A ++V+IL++MEGLSAFLH LRLHWVEFQ+KFY G G+ F
Sbjct: 757 GLSVKSLAGGLVLFFFFTAFATLTVAILLIMEGLSAFLHALRLHWVEFQNKFYSGTGFKF 816
Query: 435 QPFSFEII 458
PFSFE I
Sbjct: 817 LPFSFEHI 824
Score = 73.3 bits (172), Expect = 1e-12
Identities = 30/46 (65%), Positives = 39/46 (84%)
Frame = +1
Query: 112 EVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHAQLAEVAWNMLL 249
+ +HQAIHTIE+ LG +S+TASYLRLWALSLAHA ++EV W M++
Sbjct: 709 DTMVHQAIHTIEYCLGCISNTASYLRLWALSLAHAHVSEVLWTMVI 754
>BC032398-1|AAH32398.1| 837|Homo sapiens ATP6V0A1 protein protein.
Length = 837
Score = 90.6 bits (215), Expect = 6e-18
Identities = 40/68 (58%), Positives = 50/68 (73%)
Frame = +3
Query: 255 GLMSNDYQGGIFLYVVFAGWAAISVSILVLMEGLSAFLHTLRLHWVEFQSKFYGGEGYLF 434
GL GG+ L+ F +A ++V+IL++MEGLSAFLH LRLHWVEFQ+KFY G G+ F
Sbjct: 763 GLSVKSLAGGLVLFFFFTAFATLTVAILLIMEGLSAFLHALRLHWVEFQNKFYSGTGFKF 822
Query: 435 QPFSFEII 458
PFSFE I
Sbjct: 823 LPFSFEHI 830
Score = 76.6 bits (180), Expect = 1e-13
Identities = 32/46 (69%), Positives = 40/46 (86%)
Frame = +1
Query: 112 EVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHAQLAEVAWNMLL 249
+ +HQAIHTIE+ LG +S+TASYLRLWALSLAHAQL+EV W M++
Sbjct: 715 DTMVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWTMVI 760
>AL137683-1|CAB70874.1| 163|Homo sapiens hypothetical protein
protein.
Length = 163
Score = 90.6 bits (215), Expect = 6e-18
Identities = 40/68 (58%), Positives = 50/68 (73%)
Frame = +3
Query: 255 GLMSNDYQGGIFLYVVFAGWAAISVSILVLMEGLSAFLHTLRLHWVEFQSKFYGGEGYLF 434
GL GG+ L+ F +A ++V+IL++MEGLSAFLH LRLHWVEFQ+KFY G G+ F
Sbjct: 89 GLSVKSLAGGLVLFFFFTAFATLTVAILLIMEGLSAFLHALRLHWVEFQNKFYSGTGFKF 148
Query: 435 QPFSFEII 458
PFSFE I
Sbjct: 149 LPFSFEHI 156
Score = 76.6 bits (180), Expect = 1e-13
Identities = 32/46 (69%), Positives = 40/46 (86%)
Frame = +1
Query: 112 EVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHAQLAEVAWNMLL 249
+ +HQAIHTIE+ LG +S+TASYLRLWALSLAHAQL+EV W M++
Sbjct: 41 DTMVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWTMVI 86
>AK223554-1|BAD97274.1| 831|Homo sapiens ATPase, H+ transporting,
lysosomal V0 subunit a isoform 1 variant protein.
Length = 831
Score = 90.6 bits (215), Expect = 6e-18
Identities = 40/68 (58%), Positives = 50/68 (73%)
Frame = +3
Query: 255 GLMSNDYQGGIFLYVVFAGWAAISVSILVLMEGLSAFLHTLRLHWVEFQSKFYGGEGYLF 434
GL GG+ L+ F +A ++V+IL++MEGLSAFLH LRLHWVEFQ+KFY G G+ F
Sbjct: 757 GLSVKSLAGGLVLFFFFTAFATLTVAILLIMEGLSAFLHALRLHWVEFQNKFYSGTGFKF 816
Query: 435 QPFSFEII 458
PFSFE I
Sbjct: 817 LPFSFEHI 824
Score = 76.6 bits (180), Expect = 1e-13
Identities = 32/46 (69%), Positives = 40/46 (86%)
Frame = +1
Query: 112 EVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHAQLAEVAWNMLL 249
+ +HQAIHTIE+ LG +S+TASYLRLWALSLAHAQL+EV W M++
Sbjct: 709 DTMVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWTMVI 754
>U45285-1|AAA97878.1| 829|Homo sapiens specific 116-kDa vacuolar
proton pump subunit protein.
Length = 829
Score = 81.8 bits (193), Expect = 3e-15
Identities = 37/48 (77%), Positives = 43/48 (89%)
Frame = +1
Query: 109 TEVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHAQLAEVAWNMLLR 252
+EV +HQAIHTIEF LG VS+TASYLRLWALSLAHAQL+EV W M++R
Sbjct: 709 SEVLMHQAIHTIEFCLGCVSNTASYLRLWALSLAHAQLSEVLWAMVMR 756
Score = 81.0 bits (191), Expect = 5e-15
Identities = 34/55 (61%), Positives = 44/55 (80%)
Frame = +3
Query: 285 IFLYVVFAGWAAISVSILVLMEGLSAFLHTLRLHWVEFQSKFYGGEGYLFQPFSF 449
+ L +FA +A ++V+IL++MEGLSAFLH LRLHWVEFQ+KFY G GY PF+F
Sbjct: 770 VVLVPIFAAFAVMTVAILLVMEGLSAFLHALRLHWVEFQNKFYSGTGYKLSPFTF 824
>BC032465-1|AAH32465.1| 830|Homo sapiens T-cell, immune regulator
1, ATPase, H+ transporting, lysosomal V0 subunit A3
protein.
Length = 830
Score = 81.8 bits (193), Expect = 3e-15
Identities = 37/48 (77%), Positives = 43/48 (89%)
Frame = +1
Query: 109 TEVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHAQLAEVAWNMLLR 252
+EV +HQAIHTIEF LG VS+TASYLRLWALSLAHAQL+EV W M++R
Sbjct: 710 SEVLMHQAIHTIEFCLGCVSNTASYLRLWALSLAHAQLSEVLWAMVMR 757
Score = 81.0 bits (191), Expect = 5e-15
Identities = 34/55 (61%), Positives = 44/55 (80%)
Frame = +3
Query: 285 IFLYVVFAGWAAISVSILVLMEGLSAFLHTLRLHWVEFQSKFYGGEGYLFQPFSF 449
+ L +FA +A ++V+IL++MEGLSAFLH LRLHWVEFQ+KFY G GY PF+F
Sbjct: 771 VVLVPIFAAFAVMTVAILLVMEGLSAFLHALRLHWVEFQNKFYSGTGYKLSPFTF 825
>BC018133-1|AAH18133.1| 830|Homo sapiens T-cell, immune regulator
1, ATPase, H+ transporting, lysosomal V0 subunit A3
protein.
Length = 830
Score = 81.8 bits (193), Expect = 3e-15
Identities = 37/48 (77%), Positives = 43/48 (89%)
Frame = +1
Query: 109 TEVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHAQLAEVAWNMLLR 252
+EV +HQAIHTIEF LG VS+TASYLRLWALSLAHAQL+EV W M++R
Sbjct: 710 SEVLMHQAIHTIEFCLGCVSNTASYLRLWALSLAHAQLSEVLWAMVMR 757
Score = 81.0 bits (191), Expect = 5e-15
Identities = 34/55 (61%), Positives = 44/55 (80%)
Frame = +3
Query: 285 IFLYVVFAGWAAISVSILVLMEGLSAFLHTLRLHWVEFQSKFYGGEGYLFQPFSF 449
+ L +FA +A ++V+IL++MEGLSAFLH LRLHWVEFQ+KFY G GY PF+F
Sbjct: 771 VVLVPIFAAFAVMTVAILLVMEGLSAFLHALRLHWVEFQNKFYSGTGYKLSPFTF 825
>AF033033-1|AAD31081.2| 614|Homo sapiens TIRC7 protein protein.
Length = 614
Score = 81.8 bits (193), Expect = 3e-15
Identities = 37/48 (77%), Positives = 43/48 (89%)
Frame = +1
Query: 109 TEVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHAQLAEVAWNMLLR 252
+EV +HQAIHTIEF LG VS+TASYLRLWALSLAHAQL+EV W M++R
Sbjct: 494 SEVLMHQAIHTIEFCLGCVSNTASYLRLWALSLAHAQLSEVLWAMVMR 541
Score = 81.0 bits (191), Expect = 5e-15
Identities = 34/55 (61%), Positives = 44/55 (80%)
Frame = +3
Query: 285 IFLYVVFAGWAAISVSILVLMEGLSAFLHTLRLHWVEFQSKFYGGEGYLFQPFSF 449
+ L +FA +A ++V+IL++MEGLSAFLH LRLHWVEFQ+KFY G GY PF+F
Sbjct: 555 VVLVPIFAAFAVMTVAILLVMEGLSAFLHALRLHWVEFQNKFYSGTGYKLSPFTF 609
>AF025374-1|AAC35742.1| 614|Homo sapiens TIRC7 protein.
Length = 614
Score = 81.8 bits (193), Expect = 3e-15
Identities = 37/48 (77%), Positives = 43/48 (89%)
Frame = +1
Query: 109 TEVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHAQLAEVAWNMLLR 252
+EV +HQAIHTIEF LG VS+TASYLRLWALSLAHAQL+EV W M++R
Sbjct: 494 SEVLMHQAIHTIEFCLGCVSNTASYLRLWALSLAHAQLSEVLWAMVMR 541
Score = 81.0 bits (191), Expect = 5e-15
Identities = 34/55 (61%), Positives = 44/55 (80%)
Frame = +3
Query: 285 IFLYVVFAGWAAISVSILVLMEGLSAFLHTLRLHWVEFQSKFYGGEGYLFQPFSF 449
+ L +FA +A ++V+IL++MEGLSAFLH LRLHWVEFQ+KFY G GY PF+F
Sbjct: 555 VVLVPIFAAFAVMTVAILLVMEGLSAFLHALRLHWVEFQNKFYSGTGYKLSPFTF 609
>BC068531-1|AAH68531.1| 856|Homo sapiens ATPase, H+ transporting,
lysosomal V0 subunit a2 protein.
Length = 856
Score = 78.2 bits (184), Expect = 3e-14
Identities = 36/68 (52%), Positives = 48/68 (70%)
Frame = +3
Query: 255 GLMSNDYQGGIFLYVVFAGWAAISVSILVLMEGLSAFLHTLRLHWVEFQSKFYGGEGYLF 434
GL + G + L V A +A +++ IL++MEGLSAFLH +RLHWVEFQ+KFY G G F
Sbjct: 778 GLRVDTTYGVLLLLPVIALFAVLTIFILLIMEGLSAFLHAIRLHWVEFQNKFYVGAGTKF 837
Query: 435 QPFSFEII 458
PFSF ++
Sbjct: 838 VPFSFSLL 845
Score = 72.1 bits (169), Expect = 2e-12
Identities = 31/47 (65%), Positives = 40/47 (85%)
Frame = +1
Query: 112 EVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHAQLAEVAWNMLLR 252
E+ + Q IH+IE+ LG +S+TASYLRLWALSLAHAQL++V W ML+R
Sbjct: 730 EILMTQVIHSIEYCLGCISNTASYLRLWALSLAHAQLSDVLWAMLMR 776
>AF112972-1|AAD04632.1| 856|Homo sapiens TJ6 protein.
Length = 856
Score = 78.2 bits (184), Expect = 3e-14
Identities = 36/68 (52%), Positives = 48/68 (70%)
Frame = +3
Query: 255 GLMSNDYQGGIFLYVVFAGWAAISVSILVLMEGLSAFLHTLRLHWVEFQSKFYGGEGYLF 434
GL + G + L V A +A +++ IL++MEGLSAFLH +RLHWVEFQ+KFY G G F
Sbjct: 778 GLRVDTTYGVLLLLPVIALFAVLTIFILLIMEGLSAFLHAIRLHWVEFQNKFYVGAGTKF 837
Query: 435 QPFSFEII 458
PFSF ++
Sbjct: 838 VPFSFSLL 845
Score = 72.1 bits (169), Expect = 2e-12
Identities = 31/47 (65%), Positives = 40/47 (85%)
Frame = +1
Query: 112 EVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHAQLAEVAWNMLLR 252
E+ + Q IH+IE+ LG +S+TASYLRLWALSLAHAQL++V W ML+R
Sbjct: 730 EILMTQVIHSIEYCLGCISNTASYLRLWALSLAHAQLSDVLWAMLMR 776
>AF497545-1|AAM18704.1| 61|Homo sapiens T-cell immune regulator 1
transcript variant 3 protein.
Length = 61
Score = 66.1 bits (154), Expect = 1e-10
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +1
Query: 109 TEVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHAQ 219
+EV +HQAIHTIEF LG VS+TASYLRLWALSLAHA+
Sbjct: 11 SEVLMHQAIHTIEFCLGCVSNTASYLRLWALSLAHAR 47
>AY548971-1|AAS59838.1| 44|Homo sapiens T-cell immune regulator 1
transcript variant 8 protein.
Length = 44
Score = 33.5 bits (73), Expect = 0.95
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 96 RRRDHRGLHSPGHPYHRVRVG 158
R R RG H+PGHP+HRV G
Sbjct: 4 RARPLRGAHAPGHPHHRVLPG 24
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,751,695
Number of Sequences: 237096
Number of extensions: 1722586
Number of successful extensions: 7657
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 7527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7657
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10315140830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -