Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021119X
         (561 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   2.2  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   6.8  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   6.8  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   6.8  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = -3

Query: 355  DTEYSFEPRQSINTVSLSSERNFARSHSFDTRSHRILNP 239
            DT++S    +S++   +  E+  A+    D +SH+ILNP
Sbjct: 2051 DTQFSQLLSESLDFFGID-EKKHAQHVLVDYKSHQILNP 2088


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +3

Query: 228 QDAYGFRMRCDLVSKEWLLAKLRSDERDTVLIDCRGS 338
           + +YG +   D  S++W +    S +   +L+D  GS
Sbjct: 243 ETSYGSKEINDFRSEDWFIQAASSPKDVIILLDSSGS 279


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 8/33 (24%), Positives = 19/33 (57%)
 Frame = -2

Query: 266 HQVASHSESIGILIVHCFLLFTRTFYHFEYPVA 168
           HQ  +   ++G+L++  F L+ R F + +  ++
Sbjct: 449 HQKPNACSNLGVLLIEFFELYGRKFNYMKIGIS 481


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 11/59 (18%), Positives = 26/59 (44%)
 Frame = +3

Query: 261 LVSKEWLLAKLRSDERDTVLIDCRGSNEYSVSHIRSAVNFSIPTIMLRRIAAGKIELSS 437
           L  ++W+  K+   ++   + + +  N Y++      V   I  ++  R+    I+L S
Sbjct: 415 LTKEDWIKIKVEKADQTIEITNIKRRNPYTIQFSVPEVCMEISMMIKIRLEKNSIDLGS 473


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 601,023
Number of Sequences: 2352
Number of extensions: 12181
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)