Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021118
(724 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 154 8e-38
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 152 2e-37
SB_56| Best HMM Match : Actin (HMM E-Value=0) 152 2e-37
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 152 2e-37
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 151 7e-37
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 150 1e-36
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 136 1e-32
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 6e-19
SB_54| Best HMM Match : Actin (HMM E-Value=0) 85 7e-17
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 52 6e-07
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 38 0.006
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 38 0.008
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.058
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 34 0.10
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.54
SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0) 32 0.54
SB_1624| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.54
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 30 2.2
SB_59350| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19) 29 5.0
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 154 bits (373), Expect = 8e-38
Identities = 69/72 (95%), Positives = 71/72 (98%)
Frame = -1
Query: 724 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 545
KSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANT
Sbjct: 201 KSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANT 260
Query: 544 VLSGGTTMYPGI 509
VLSGGTTMYPGI
Sbjct: 261 VLSGGTTMYPGI 272
Score = 133 bits (322), Expect = 1e-31
Identities = 62/69 (89%), Positives = 64/69 (92%)
Frame = -3
Query: 518 PWNPDRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIXASLSTFQQMWISKQEYDESG 339
P DRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSI ASLSTFQQMWISKQEYDESG
Sbjct: 270 PGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 329
Query: 338 PSIVHRKCF 312
P+IVHRKCF
Sbjct: 330 PAIVHRKCF 338
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 152 bits (369), Expect = 2e-37
Identities = 68/72 (94%), Positives = 71/72 (98%)
Frame = -1
Query: 724 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 545
KSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANT
Sbjct: 239 KSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANT 298
Query: 544 VLSGGTTMYPGI 509
VLSGG+TMYPGI
Sbjct: 299 VLSGGSTMYPGI 310
Score = 135 bits (326), Expect = 4e-32
Identities = 63/69 (91%), Positives = 64/69 (92%)
Frame = -3
Query: 518 PWNPDRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIXASLSTFQQMWISKQEYDESG 339
P DRMQKEIT+LAP TMKIKIIAPPERKYSVWIGGSI ASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367
Query: 338 PSIVHRKCF 312
PSIVHRKCF
Sbjct: 368 PSIVHRKCF 376
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 152 bits (369), Expect = 2e-37
Identities = 68/72 (94%), Positives = 71/72 (98%)
Frame = -1
Query: 724 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 545
KSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANT
Sbjct: 238 KSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANT 297
Query: 544 VLSGGTTMYPGI 509
VLSGG+TMYPGI
Sbjct: 298 VLSGGSTMYPGI 309
Score = 135 bits (326), Expect = 4e-32
Identities = 63/69 (91%), Positives = 64/69 (92%)
Frame = -3
Query: 518 PWNPDRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIXASLSTFQQMWISKQEYDESG 339
P DRMQKEIT+LAP TMKIKIIAPPERKYSVWIGGSI ASLSTFQQMWISKQEYDESG
Sbjct: 307 PGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 366
Query: 338 PSIVHRKCF 312
PSIVHRKCF
Sbjct: 367 PSIVHRKCF 375
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 152 bits (369), Expect = 2e-37
Identities = 68/72 (94%), Positives = 71/72 (98%)
Frame = -1
Query: 724 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 545
KSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANT
Sbjct: 239 KSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANT 298
Query: 544 VLSGGTTMYPGI 509
VLSGG+TMYPGI
Sbjct: 299 VLSGGSTMYPGI 310
Score = 134 bits (325), Expect = 5e-32
Identities = 63/69 (91%), Positives = 64/69 (92%)
Frame = -3
Query: 518 PWNPDRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIXASLSTFQQMWISKQEYDESG 339
P DRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSI ASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367
Query: 338 PSIVHRKCF 312
PSIVHRKCF
Sbjct: 368 PSIVHRKCF 376
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 151 bits (365), Expect = 7e-37
Identities = 67/72 (93%), Positives = 71/72 (98%)
Frame = -1
Query: 724 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 545
KSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANT
Sbjct: 238 KSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANT 297
Query: 544 VLSGGTTMYPGI 509
VLSGG+TM+PGI
Sbjct: 298 VLSGGSTMFPGI 309
Score = 134 bits (325), Expect = 5e-32
Identities = 63/69 (91%), Positives = 64/69 (92%)
Frame = -3
Query: 518 PWNPDRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIXASLSTFQQMWISKQEYDESG 339
P DRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSI ASLSTFQQMWISKQEYDESG
Sbjct: 307 PGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 366
Query: 338 PSIVHRKCF 312
PSIVHRKCF
Sbjct: 367 PSIVHRKCF 375
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 150 bits (364), Expect = 1e-36
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = -1
Query: 724 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 545
KSYELPDGQVITIGNERFRCPEAL QPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANT
Sbjct: 212 KSYELPDGQVITIGNERFRCPEALLQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANT 271
Query: 544 VLSGGTTMYPGI 509
V+SGGTTMYPG+
Sbjct: 272 VMSGGTTMYPGL 283
Score = 135 bits (327), Expect = 3e-32
Identities = 63/69 (91%), Positives = 65/69 (94%)
Frame = -3
Query: 518 PWNPDRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIXASLSTFQQMWISKQEYDESG 339
P DRMQKEI+ALAPSTMKIKIIAPPERKYSVWIGGSI ASLSTFQQMWISKQEYDESG
Sbjct: 281 PGLADRMQKEISALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 340
Query: 338 PSIVHRKCF 312
P+IVHRKCF
Sbjct: 341 PAIVHRKCF 349
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 136 bits (330), Expect = 1e-32
Identities = 60/72 (83%), Positives = 67/72 (93%)
Frame = -1
Query: 724 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 545
K+YELPDGQVI+IGNERFRCPEA+FQP+FLGMEA GIHE YN IMKCDVDIRKDLY+N
Sbjct: 12 KTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIRKDLYSNC 71
Query: 544 VLSGGTTMYPGI 509
VLSGG+TM+PGI
Sbjct: 72 VLSGGSTMFPGI 83
Score = 117 bits (282), Expect = 8e-27
Identities = 53/69 (76%), Positives = 59/69 (85%)
Frame = -3
Query: 518 PWNPDRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIXASLSTFQQMWISKQEYDESG 339
P DRMQKEI LA ++MK+K+IAPPERKYSVWIGGSI ASLSTFQQMWI+K+EY E G
Sbjct: 81 PGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSILASLSTFQQMWIAKEEYHEYG 140
Query: 338 PSIVHRKCF 312
P IVHRKCF
Sbjct: 141 PPIVHRKCF 149
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 91.5 bits (217), Expect = 6e-19
Identities = 37/79 (46%), Positives = 54/79 (68%)
Frame = -1
Query: 724 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 545
+ Y LPDG+V+ + ERF PEALFQP + +E G+ E +N+I D+D R + Y +
Sbjct: 242 EQYTLPDGRVVKLSGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHI 301
Query: 544 VLSGGTTMYPGIPTVCKRK 488
VLSGG+TMYPG+P+ +R+
Sbjct: 302 VLSGGSTMYPGLPSRLERE 320
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/42 (38%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = -3
Query: 461 KIKIIAPPERKYSVWIGGSIXAS-LSTFQQMWISKQEYDESG 339
KI+I PP RK+ V++GG++ A + W++++EY+E G
Sbjct: 358 KIRIEDPPRRKHMVFMGGAVLADIMKDKDSFWMTRKEYEEKG 399
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 84.6 bits (200), Expect = 7e-17
Identities = 38/62 (61%), Positives = 46/62 (74%)
Frame = -1
Query: 718 YELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 539
Y LPDGQ I IG+ERFR E LFQPS LG + GIHE+ + SI KCD+D+R +L+ N VL
Sbjct: 2285 YMLPDGQSIRIGSERFRAAEPLFQPSLLGRDIDGIHESIFKSIKKCDIDLRAELFHNIVL 2344
Query: 538 SG 533
SG
Sbjct: 2345 SG 2346
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 51.6 bits (118), Expect = 6e-07
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = -1
Query: 694 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 518
+ + ERF PE F P F + + E N I C +D+R+ LY N VLSGG+TM+
Sbjct: 196 VDVAYERFLGPEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRRPLYKNIVLSGGSTMF 255
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/60 (36%), Positives = 35/60 (58%)
Frame = -3
Query: 479 LAPSTMKIKIIAPPERKYSVWIGGSIXASLSTFQQMWISKQEYDESGPSIVHRKCF*THR 300
+ P ++ ++I+ ++Y+VW GGS+ AS F + +K +YDE GPSI F HR
Sbjct: 285 IKPKPIETQVISHHMQRYAVWFGGSMLASTPEFYSVCHTKADYDEHGPSICRHNPF-LHR 343
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = -1
Query: 595 SIMKCDVDIRKDLYANTVLSGGTTMYPG 512
+I K D+D+R+ LY+N VLSGG+T++ G
Sbjct: 264 AIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/42 (38%), Positives = 30/42 (71%), Gaps = 3/42 (7%)
Frame = -3
Query: 506 DRMQKEITALAPSTMKIKIIA---PPERKYSVWIGGSIXASL 390
+R+ +E+ + P +M++K+I+ E++++ WIGGSI ASL
Sbjct: 189 ERLNRELVSKTPPSMRLKLISNNSSVEKRFNPWIGGSILASL 230
Score = 33.1 bits (72), Expect = 0.23
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -1
Query: 634 GMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPG 512
G A G+ + S+ D+DIR L+ + +++GG T+ G
Sbjct: 146 GSTAMGVTQVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQG 186
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 35.1 bits (77), Expect = 0.058
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -1
Query: 598 NSIMKCDVDIRKDLYANTVLSGGTTMYPG 512
+S++ C +D RK L N VL GGT M PG
Sbjct: 64 DSLLLCPIDTRKTLAENIVLIGGTAMTPG 92
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 34.3 bits (75), Expect = 0.10
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = -1
Query: 724 KSYELPDGQVITIGNERFRCPEALFQPSFL 635
K Y LPDGQ+I+IG E E LF+P L
Sbjct: 869 KFYTLPDGQMISIGYECISSMEPLFRPDLL 898
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 31.9 bits (69), Expect = 0.54
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 664 PEALFQPSFLGMEACGIHET 605
PE +FQPS LG+E GI ET
Sbjct: 3 PEIIFQPSMLGLEQAGITET 22
>SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0)
Length = 1066
Score = 31.9 bits (69), Expect = 0.54
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = -1
Query: 385 PSNRCGSRNRSTTSLAPPLYTGSASK--RTARRCLQQPAAGCSIQAVISV 242
P N+ G++ R +L P++TGS + RT + P+A C ++++V
Sbjct: 879 PGNQAGNKTRPLRALRSPIHTGSTLEVDRTRQGTRPDPSARCDPLSILAV 928
>SB_1624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 427
Score = 31.9 bits (69), Expect = 0.54
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +1
Query: 175 RPALRPAVTITLITIISYVQLN*RRLQP 258
RP + PA T TLIT+I YV+++ L+P
Sbjct: 125 RPLMTPAKTGTLITVIDYVEIDKTLLEP 152
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 403 IDPPIHTEYFLSGGAMILIFIVDGARAVISFCIRSGF 513
+DPP+ +Y L+GG ++ + FCI GF
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCIFQGF 794
>SB_59350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 987
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Frame = +1
Query: 394 EAXIDPPIHTEYFLSGGAMILIFIVDGARAVISF------CIRSGFQGTWWYHRTIRCWR 555
E +D P+H YF + ++L I + ++ +F I W+H+ CW
Sbjct: 645 EKELDLPVHNTYFWTDSTIVLQSIENKSKRFKTFFANRLSTIHDISSPDQWFHKQEECWP 704
Query: 556 TSP 564
+ P
Sbjct: 705 SQP 707
>SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19)
Length = 158
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -2
Query: 696 SSLSETKDSVAQRLSSNPRSWVWK 625
S+ SETK SV +R + + W+W+
Sbjct: 96 STKSETKASVVERFNRTSKEWMWR 119
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,688,247
Number of Sequences: 59808
Number of extensions: 485285
Number of successful extensions: 1317
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1314
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1925890720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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