Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021118
         (724 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         159   6e-41
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         159   6e-41
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         159   6e-41
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          146   8e-37
DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.        28   0.25 
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    25   3.1  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    23   7.2  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    23   9.6  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  159 bits (387), Expect = 6e-41
 Identities = 72/72 (100%), Positives = 72/72 (100%)
 Frame = -1

Query: 724 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 545
           KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT
Sbjct: 239 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 298

Query: 544 VLSGGTTMYPGI 509
           VLSGGTTMYPGI
Sbjct: 299 VLSGGTTMYPGI 310



 Score =  138 bits (334), Expect = 2e-34
 Identities = 65/69 (94%), Positives = 65/69 (94%)
 Frame = -3

Query: 518 PWNPDRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIXASLSTFQQMWISKQEYDESG 339
           P   DRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSI ASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367

Query: 338 PSIVHRKCF 312
           PSIVHRKCF
Sbjct: 368 PSIVHRKCF 376


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  159 bits (387), Expect = 6e-41
 Identities = 72/72 (100%), Positives = 72/72 (100%)
 Frame = -1

Query: 724 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 545
           KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT
Sbjct: 239 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 298

Query: 544 VLSGGTTMYPGI 509
           VLSGGTTMYPGI
Sbjct: 299 VLSGGTTMYPGI 310



 Score =  138 bits (334), Expect = 2e-34
 Identities = 65/69 (94%), Positives = 65/69 (94%)
 Frame = -3

Query: 518 PWNPDRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIXASLSTFQQMWISKQEYDESG 339
           P   DRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSI ASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367

Query: 338 PSIVHRKCF 312
           PSIVHRKCF
Sbjct: 368 PSIVHRKCF 376


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  159 bits (387), Expect = 6e-41
 Identities = 72/72 (100%), Positives = 72/72 (100%)
 Frame = -1

Query: 724 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 545
           KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT
Sbjct: 239 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 298

Query: 544 VLSGGTTMYPGI 509
           VLSGGTTMYPGI
Sbjct: 299 VLSGGTTMYPGI 310



 Score =  138 bits (334), Expect = 2e-34
 Identities = 65/69 (94%), Positives = 65/69 (94%)
 Frame = -3

Query: 518 PWNPDRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIXASLSTFQQMWISKQEYDESG 339
           P   DRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSI ASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367

Query: 338 PSIVHRKCF 312
           PSIVHRKCF
Sbjct: 368 PSIVHRKCF 376


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  146 bits (353), Expect = 8e-37
 Identities = 66/72 (91%), Positives = 69/72 (95%)
 Frame = -1

Query: 724 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 545
           KSYELPDGQVITIGNERFR PEALFQPSFLGME+ GIHET YNSIM+CDVDIRKDLYAN+
Sbjct: 239 KSYELPDGQVITIGNERFRAPEALFQPSFLGMESTGIHETVYNSIMRCDVDIRKDLYANS 298

Query: 544 VLSGGTTMYPGI 509
           VLSGGTTMYPGI
Sbjct: 299 VLSGGTTMYPGI 310



 Score =  128 bits (308), Expect = 2e-31
 Identities = 59/69 (85%), Positives = 61/69 (88%)
 Frame = -3

Query: 518 PWNPDRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIXASLSTFQQMWISKQEYDESG 339
           P   DRMQKEIT+LAPST+KIKIIAPPERKYSVWIGGSI ASLSTFQ MWISK EYDE G
Sbjct: 308 PGIADRMQKEITSLAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQTMWISKHEYDEGG 367

Query: 338 PSIVHRKCF 312
           P IVHRKCF
Sbjct: 368 PGIVHRKCF 376


>DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.
          Length = 418

 Score = 28.3 bits (60), Expect = 0.25
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = -1

Query: 355 STTSLAPPLYTGSASKRTARRCLQQPAAGCSIQAV 251
           S  +L   LY GSAS+    R LQQ  +G + QAV
Sbjct: 70  SVKALLALLYEGSASRSETERELQQALSGGNSQAV 104


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 228 VRYYCN*RNSDGRTERGPRARLD 160
           +RYY +   S+G+TE G   +LD
Sbjct: 867 LRYYIDRSLSEGKTEEGALVKLD 889


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -3

Query: 197 TAGRSAGRGRASTAGPVLH 141
           T GRSAG G  S  G  LH
Sbjct: 411 TIGRSAGLGTISAGGGRLH 429


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 12/45 (26%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +3

Query: 483 CDFLLHTVGIPGYMVVPPDNTVLAYKSL-RMSTSHFMMELYVVSW 614
           CD L + + + GY      + VL Y    R   ++F   + +VS+
Sbjct: 75  CDVLFNVISLAGYFCDVVFDVVLGYALYERQKFAYFAAVIVIVSF 119


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 725,861
Number of Sequences: 2352
Number of extensions: 15856
Number of successful extensions: 41
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)