Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021118
(724 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 152 2e-37
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 152 2e-37
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 152 2e-37
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 152 2e-37
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 152 2e-37
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 152 2e-37
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 151 4e-37
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 151 4e-37
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 151 4e-37
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 151 4e-37
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 145 3e-35
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 90 2e-18
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 83 1e-16
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 82 3e-16
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 64 1e-10
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 55 6e-08
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 55 6e-08
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 55 6e-08
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 36 0.039
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.63
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.63
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.63
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 29 4.4
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 4.4
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 4.4
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 5.9
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 5.9
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 5.9
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 7.8
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 28 7.8
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 28 7.8
AC084159-2|AAK39359.1| 659|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 152 bits (369), Expect = 2e-37
Identities = 67/72 (93%), Positives = 71/72 (98%)
Frame = -1
Query: 724 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 545
KSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANT
Sbjct: 239 KSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANT 298
Query: 544 VLSGGTTMYPGI 509
VLSGGTTMYPGI
Sbjct: 299 VLSGGTTMYPGI 310
Score = 138 bits (334), Expect = 4e-33
Identities = 65/69 (94%), Positives = 65/69 (94%)
Frame = -3
Query: 518 PWNPDRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIXASLSTFQQMWISKQEYDESG 339
P DRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSI ASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367
Query: 338 PSIVHRKCF 312
PSIVHRKCF
Sbjct: 368 PSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 152 bits (369), Expect = 2e-37
Identities = 67/72 (93%), Positives = 71/72 (98%)
Frame = -1
Query: 724 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 545
KSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANT
Sbjct: 239 KSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANT 298
Query: 544 VLSGGTTMYPGI 509
VLSGGTTMYPGI
Sbjct: 299 VLSGGTTMYPGI 310
Score = 138 bits (334), Expect = 4e-33
Identities = 65/69 (94%), Positives = 65/69 (94%)
Frame = -3
Query: 518 PWNPDRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIXASLSTFQQMWISKQEYDESG 339
P DRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSI ASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367
Query: 338 PSIVHRKCF 312
PSIVHRKCF
Sbjct: 368 PSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 152 bits (369), Expect = 2e-37
Identities = 67/72 (93%), Positives = 71/72 (98%)
Frame = -1
Query: 724 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 545
KSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANT
Sbjct: 239 KSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANT 298
Query: 544 VLSGGTTMYPGI 509
VLSGGTTMYPGI
Sbjct: 299 VLSGGTTMYPGI 310
Score = 138 bits (334), Expect = 4e-33
Identities = 65/69 (94%), Positives = 65/69 (94%)
Frame = -3
Query: 518 PWNPDRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIXASLSTFQQMWISKQEYDESG 339
P DRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSI ASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367
Query: 338 PSIVHRKCF 312
PSIVHRKCF
Sbjct: 368 PSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 152 bits (369), Expect = 2e-37
Identities = 67/72 (93%), Positives = 71/72 (98%)
Frame = -1
Query: 724 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 545
KSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANT
Sbjct: 195 KSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANT 254
Query: 544 VLSGGTTMYPGI 509
VLSGGTTMYPGI
Sbjct: 255 VLSGGTTMYPGI 266
Score = 138 bits (334), Expect = 4e-33
Identities = 65/69 (94%), Positives = 65/69 (94%)
Frame = -3
Query: 518 PWNPDRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIXASLSTFQQMWISKQEYDESG 339
P DRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSI ASLSTFQQMWISKQEYDESG
Sbjct: 264 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 323
Query: 338 PSIVHRKCF 312
PSIVHRKCF
Sbjct: 324 PSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 152 bits (369), Expect = 2e-37
Identities = 67/72 (93%), Positives = 71/72 (98%)
Frame = -1
Query: 724 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 545
KSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANT
Sbjct: 225 KSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANT 284
Query: 544 VLSGGTTMYPGI 509
VLSGGTTMYPGI
Sbjct: 285 VLSGGTTMYPGI 296
Score = 138 bits (334), Expect = 4e-33
Identities = 65/69 (94%), Positives = 65/69 (94%)
Frame = -3
Query: 518 PWNPDRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIXASLSTFQQMWISKQEYDESG 339
P DRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSI ASLSTFQQMWISKQEYDESG
Sbjct: 294 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 353
Query: 338 PSIVHRKCF 312
PSIVHRKCF
Sbjct: 354 PSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 152 bits (369), Expect = 2e-37
Identities = 67/72 (93%), Positives = 71/72 (98%)
Frame = -1
Query: 724 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 545
KSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANT
Sbjct: 239 KSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANT 298
Query: 544 VLSGGTTMYPGI 509
VLSGGTTMYPGI
Sbjct: 299 VLSGGTTMYPGI 310
Score = 138 bits (334), Expect = 4e-33
Identities = 65/69 (94%), Positives = 65/69 (94%)
Frame = -3
Query: 518 PWNPDRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIXASLSTFQQMWISKQEYDESG 339
P DRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSI ASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367
Query: 338 PSIVHRKCF 312
PSIVHRKCF
Sbjct: 368 PSIVHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 151 bits (367), Expect = 4e-37
Identities = 66/72 (91%), Positives = 71/72 (98%)
Frame = -1
Query: 724 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 545
KSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANT
Sbjct: 239 KSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANT 298
Query: 544 VLSGGTTMYPGI 509
VLSGGTTMYPGI
Sbjct: 299 VLSGGTTMYPGI 310
Score = 138 bits (334), Expect = 4e-33
Identities = 65/69 (94%), Positives = 65/69 (94%)
Frame = -3
Query: 518 PWNPDRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIXASLSTFQQMWISKQEYDESG 339
P DRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSI ASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367
Query: 338 PSIVHRKCF 312
PSIVHRKCF
Sbjct: 368 PSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 151 bits (367), Expect = 4e-37
Identities = 66/72 (91%), Positives = 71/72 (98%)
Frame = -1
Query: 724 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 545
KSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANT
Sbjct: 239 KSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANT 298
Query: 544 VLSGGTTMYPGI 509
VLSGGTTMYPGI
Sbjct: 299 VLSGGTTMYPGI 310
Score = 138 bits (334), Expect = 4e-33
Identities = 65/69 (94%), Positives = 65/69 (94%)
Frame = -3
Query: 518 PWNPDRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIXASLSTFQQMWISKQEYDESG 339
P DRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSI ASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367
Query: 338 PSIVHRKCF 312
PSIVHRKCF
Sbjct: 368 PSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 151 bits (367), Expect = 4e-37
Identities = 66/72 (91%), Positives = 71/72 (98%)
Frame = -1
Query: 724 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 545
KSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANT
Sbjct: 239 KSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANT 298
Query: 544 VLSGGTTMYPGI 509
VLSGGTTMYPGI
Sbjct: 299 VLSGGTTMYPGI 310
Score = 132 bits (319), Expect = 2e-31
Identities = 64/69 (92%), Positives = 64/69 (92%)
Frame = -3
Query: 518 PWNPDRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIXASLSTFQQMWISKQEYDESG 339
P DRMQKEITALAP TMKIKIIAPPERKYSVWIGGSI ASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 366
Query: 338 PSIVHRKCF 312
PSIVHRKCF
Sbjct: 367 PSIVHRKCF 375
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 151 bits (367), Expect = 4e-37
Identities = 66/72 (91%), Positives = 71/72 (98%)
Frame = -1
Query: 724 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 545
KSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANT
Sbjct: 239 KSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANT 298
Query: 544 VLSGGTTMYPGI 509
VLSGGTTMYPGI
Sbjct: 299 VLSGGTTMYPGI 310
Score = 138 bits (334), Expect = 4e-33
Identities = 65/69 (94%), Positives = 65/69 (94%)
Frame = -3
Query: 518 PWNPDRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIXASLSTFQQMWISKQEYDESG 339
P DRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSI ASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367
Query: 338 PSIVHRKCF 312
PSIVHRKCF
Sbjct: 368 PSIVHRKCF 376
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 145 bits (351), Expect = 3e-35
Identities = 64/72 (88%), Positives = 68/72 (94%)
Frame = -1
Query: 724 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 545
KSYELPDGQVITIGNERFRCPE LFQP+F+GME GIHETTY SIMKCDVDIRKDLYANT
Sbjct: 238 KSYELPDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANT 297
Query: 544 VLSGGTTMYPGI 509
VLSGGT+M+PGI
Sbjct: 298 VLSGGTSMFPGI 309
Score = 133 bits (322), Expect = 1e-31
Identities = 63/69 (91%), Positives = 63/69 (91%)
Frame = -3
Query: 518 PWNPDRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIXASLSTFQQMWISKQEYDESG 339
P DRMQKEI LAPSTMKIKIIAPPERKYSVWIGGSI ASLSTFQQMWISKQEYDESG
Sbjct: 307 PGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 366
Query: 338 PSIVHRKCF 312
PSIVHRKCF
Sbjct: 367 PSIVHRKCF 375
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 89.8 bits (213), Expect = 2e-18
Identities = 38/74 (51%), Positives = 49/74 (66%)
Frame = -1
Query: 724 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 545
+ Y LPDG+VI +G ERF PE LFQP + +E G+ E + I D+D R D Y +
Sbjct: 242 QQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHI 301
Query: 544 VLSGGTTMYPGIPT 503
VLSGGTTMYPG+P+
Sbjct: 302 VLSGGTTMYPGLPS 315
Score = 48.0 bits (109), Expect = 7e-06
Identities = 21/43 (48%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Frame = -3
Query: 461 KIKIIAPPERKYSVWIGGSIXASL--STFQQMWISKQEYDESG 339
KI+I APP RK+ V++GG++ A+L Q W+SK+EY+E G
Sbjct: 341 KIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 83.4 bits (197), Expect = 1e-16
Identities = 37/67 (55%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
Frame = -3
Query: 506 DRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSIXASLSTFQQMWISKQEYDESGP 336
+R+ + P T+K+++ A P ERKY WIGGSI SL TFQQMW+SK EYDESG
Sbjct: 369 ERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGTFQQMWVSKAEYDESGK 428
Query: 335 SIVHRKC 315
SIV +KC
Sbjct: 429 SIVEKKC 435
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Frame = -1
Query: 718 YELPDGQVITIGNERFRCPEALFQPSFLGMEA-----CGIHETTYNSIMKCDVDIRKDLY 554
Y P+G G ER + PE LF +L E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 553 ANTVLSGGTTMYPG 512
+N ++GG ++ G
Sbjct: 353 SNVTVTGGNSLILG 366
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 82.2 bits (194), Expect = 3e-16
Identities = 38/70 (54%), Positives = 46/70 (65%)
Frame = -1
Query: 721 SYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTV 542
SY LPD I I N FR PE LF+P +G E G+ SIMKCDVD+R+ LY+N V
Sbjct: 238 SYALPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIV 297
Query: 541 LSGGTTMYPG 512
LSGGTT++ G
Sbjct: 298 LSGGTTLFKG 307
Score = 71.3 bits (167), Expect = 6e-13
Identities = 31/65 (47%), Positives = 45/65 (69%)
Frame = -3
Query: 506 DRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIXASLSTFQQMWISKQEYDESGPSIV 327
DR+ E+ +AP+ KI+I A ER WIGGSI ASL TF++MW+ K+EY++ G S +
Sbjct: 310 DRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAM 369
Query: 326 HRKCF 312
H++ F
Sbjct: 370 HKRFF 374
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 63.7 bits (148), Expect = 1e-10
Identities = 25/60 (41%), Positives = 39/60 (65%)
Frame = -1
Query: 688 IGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGI 509
I N RF C E LF+P G++ G+H+ + +I++C +D R+ LY N L+GG ++ PGI
Sbjct: 428 IDNSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGI 487
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/56 (28%), Positives = 34/56 (60%)
Frame = -3
Query: 521 VPWNPDRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIXASLSTFQQMWISKQE 354
+P +++++E++ + P+T+ ++ P R + ++G I AS STF+ IS Q+
Sbjct: 484 MPGIAEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 54.8 bits (126), Expect = 6e-08
Identities = 24/61 (39%), Positives = 36/61 (59%)
Frame = -1
Query: 694 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 515
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 514 G 512
G
Sbjct: 323 G 323
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 54.8 bits (126), Expect = 6e-08
Identities = 24/61 (39%), Positives = 36/61 (59%)
Frame = -1
Query: 694 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 515
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 514 G 512
G
Sbjct: 323 G 323
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 54.8 bits (126), Expect = 6e-08
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = -1
Query: 694 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 518
+ +G ERF PE F P F E I +T I +C +D+R+ LY N VLSGG+TM+
Sbjct: 276 VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMF 335
Score = 49.2 bits (112), Expect = 3e-06
Identities = 22/50 (44%), Positives = 33/50 (66%)
Frame = -3
Query: 479 LAPSTMKIKIIAPPERKYSVWIGGSIXASLSTFQQMWISKQEYDESGPSI 330
L P + +++I+ ++Y+VW GGS+ AS S F Q+ +K EY E GPSI
Sbjct: 365 LKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 35.5 bits (78), Expect = 0.039
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -1
Query: 592 IMKCDVDIRKDLYANTVLSGGTTMYPGI 509
+ KC +D+RK L+ N +L+GG + PG+
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGL 225
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.63
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 417 PYGVLPLWRSNDLNLHCRWGESCD 488
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.63
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 417 PYGVLPLWRSNDLNLHCRWGESCD 488
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.63
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 417 PYGVLPLWRSNDLNLHCRWGESCD 488
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -3
Query: 686 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 573
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 994 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1031
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -3
Query: 686 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 573
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -3
Query: 686 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 573
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 994 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1031
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -3
Query: 686 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 573
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -3
Query: 686 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 573
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 253 QPELSSRPRAAGGSDARCV*KHFLCTMEGPD 345
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 253 QPELSSRPRAAGGSDARCV*KHFLCTMEGPD 345
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -3
Query: 437 ERKYSVWIGGSIXASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 276
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 356 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 255
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -3
Query: 719 LRTSGRSGHHYRKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRGHP 567
L SG G R P+G+L LV G G ++ +D L HE+ HP
Sbjct: 22 LNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHP 72
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -3
Query: 719 LRTSGRSGHHYRKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRGHP 567
L SG G R P+G+L LV G G ++ +D L HE+ HP
Sbjct: 22 LNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHP 72
>AC084159-2|AAK39359.1| 659|Caenorhabditis elegans Hypothetical
protein Y73B3A.1 protein.
Length = 659
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +1
Query: 85 IRFSTYNHHS*DYKKSFGECSTGPAVEAR 171
I F YN S K+ GECST PAV R
Sbjct: 516 IAFVEYNSRS-SRKRKAGECSTPPAVTRR 543
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,623,358
Number of Sequences: 27780
Number of extensions: 332480
Number of successful extensions: 897
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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