Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021117
(817 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003143-2|AAK68267.2| 554|Caenorhabditis elegans Hypothetical ... 96 3e-20
AF003143-4|AAO61427.1| 247|Caenorhabditis elegans Hypothetical ... 83 2e-16
AF003143-3|AAL65781.1| 385|Caenorhabditis elegans Hypothetical ... 83 2e-16
AL021571-4|CAI79270.1| 610|Caenorhabditis elegans Hypothetical ... 49 3e-06
AL021571-2|CAA16514.2| 592|Caenorhabditis elegans Hypothetical ... 49 3e-06
AL021571-1|CAA16512.2| 651|Caenorhabditis elegans Hypothetical ... 49 3e-06
Z49068-9|CAA88860.1| 556|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 32 0.56
U40412-3|AAV28343.2| 381|Caenorhabditis elegans Hypothetical pr... 30 1.7
U64836-4|AAG24059.1| 417|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF078157-5|AAN84817.1| 379|Caenorhabditis elegans Hypothetical ... 29 4.0
Z79639-2|CAB01915.1| 367|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 28 7.0
AC025726-9|AAK73924.1| 594|Caenorhabditis elegans Hypothetical ... 28 7.0
AC025726-8|AAT81183.1| 537|Caenorhabditis elegans Hypothetical ... 28 7.0
U49956-4|AAK77620.1| 1117|Caenorhabditis elegans Variable abnorm... 28 9.2
U49956-3|AAK77621.1| 1122|Caenorhabditis elegans Variable abnorm... 28 9.2
AY152852-1|AAN62580.1| 770|Caenorhabditis elegans suppressor of... 28 9.2
AL032636-3|CAA21604.1| 770|Caenorhabditis elegans Hypothetical ... 28 9.2
AF040269-1|AAC38970.1| 1122|Caenorhabditis elegans Eph receptor ... 28 9.2
>AF003143-2|AAK68267.2| 554|Caenorhabditis elegans Hypothetical
protein C53H9.2a protein.
Length = 554
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/83 (50%), Positives = 61/83 (73%), Gaps = 2/83 (2%)
Frame = +2
Query: 512 VTPYERNLELWKQLWRTLEKSDIVLILLDARDPLLFRCVDLEKYAKE--QKCQSILLLNK 685
+TP+ERN ++W++LWR +EKSDI++ ++DAR+PLLFR DL+ Y KE Q +LL+NK
Sbjct: 161 LTPFERNPDMWRELWRVVEKSDIIVQIVDARNPLLFRSKDLDDYVKEVDPAKQILLLVNK 220
Query: 686 ADLTSEYERKCWAEYFNKGNIRI 754
ADL ++ W EYF K NI++
Sbjct: 221 ADLLKPEQQASWREYFEKENIKV 243
Score = 52.4 bits (120), Expect = 4e-07
Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Frame = +3
Query: 255 QEFLSTAELAQREFTAEKLNLKYVKS-----VPSEV---AIVTSQPDFDEPLTVPRRPQW 410
+EFL+ AELA EFTAEK K ++ VP+ + A + Q + + L +PRRP
Sbjct: 67 EEFLAKAELAGTEFTAEKEQFKIIEKNSAIVVPTRLDYRANLDLQKENEHRLRIPRRPAK 126
Query: 411 NPGVTAEEQLNRERETFLDWRRHLNELQ 494
E+ E E FL WR L+ELQ
Sbjct: 127 ELWENMEDLTKLENEAFLQWRSDLSELQ 154
>AF003143-4|AAO61427.1| 247|Caenorhabditis elegans Hypothetical
protein C53H9.2c protein.
Length = 247
Score = 83.4 bits (197), Expect = 2e-16
Identities = 37/74 (50%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
Frame = +2
Query: 539 LWKQLWRTLEKSDIVLILLDARDPLLFRCVDLEKYAKE--QKCQSILLLNKADLTSEYER 712
+W++LWR +EKSDI++ ++DAR+PLLFR DL+ Y KE Q +LL+NKADL ++
Sbjct: 1 MWRELWRVVEKSDIIVQIVDARNPLLFRSKDLDDYVKEVDPAKQILLLVNKADLLKPEQQ 60
Query: 713 KCWAEYFNKGNIRI 754
W EYF K NI++
Sbjct: 61 ASWREYFEKENIKV 74
>AF003143-3|AAL65781.1| 385|Caenorhabditis elegans Hypothetical
protein C53H9.2b protein.
Length = 385
Score = 83.4 bits (197), Expect = 2e-16
Identities = 37/74 (50%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
Frame = +2
Query: 539 LWKQLWRTLEKSDIVLILLDARDPLLFRCVDLEKYAKE--QKCQSILLLNKADLTSEYER 712
+W++LWR +EKSDI++ ++DAR+PLLFR DL+ Y KE Q +LL+NKADL ++
Sbjct: 1 MWRELWRVVEKSDIIVQIVDARNPLLFRSKDLDDYVKEVDPAKQILLLVNKADLLKPEQQ 60
Query: 713 KCWAEYFNKGNIRI 754
W EYF K NI++
Sbjct: 61 ASWREYFEKENIKV 74
>AL021571-4|CAI79270.1| 610|Caenorhabditis elegans Hypothetical
protein T19A6.2c protein.
Length = 610
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/69 (28%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Frame = +2
Query: 539 LWKQLWRTLEKSDIVLILLDARDPLLFRCVDLEKYAKEQKCQS--ILLLNKADLTSEYER 712
+W +L++ ++ SD+V+ ++DARDP+ RC +E++ +++K + ++NK DL +
Sbjct: 221 VWGELYKVIDSSDVVVQVVDARDPMGTRCRHVEEFLRKEKPHKHLVTVINKVDLVPTWVT 280
Query: 713 KCWAEYFNK 739
+ W +K
Sbjct: 281 RKWIGELSK 289
>AL021571-2|CAA16514.2| 592|Caenorhabditis elegans Hypothetical
protein T19A6.2b protein.
Length = 592
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/69 (28%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Frame = +2
Query: 539 LWKQLWRTLEKSDIVLILLDARDPLLFRCVDLEKYAKEQKCQS--ILLLNKADLTSEYER 712
+W +L++ ++ SD+V+ ++DARDP+ RC +E++ +++K + ++NK DL +
Sbjct: 162 VWGELYKVIDSSDVVVQVVDARDPMGTRCRHVEEFLRKEKPHKHLVTVINKVDLVPTWVT 221
Query: 713 KCWAEYFNK 739
+ W +K
Sbjct: 222 RKWIGELSK 230
>AL021571-1|CAA16512.2| 651|Caenorhabditis elegans Hypothetical
protein T19A6.2a protein.
Length = 651
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/69 (28%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Frame = +2
Query: 539 LWKQLWRTLEKSDIVLILLDARDPLLFRCVDLEKYAKEQKCQS--ILLLNKADLTSEYER 712
+W +L++ ++ SD+V+ ++DARDP+ RC +E++ +++K + ++NK DL +
Sbjct: 221 VWGELYKVIDSSDVVVQVVDARDPMGTRCRHVEEFLRKEKPHKHLVTVINKVDLVPTWVT 280
Query: 713 KCWAEYFNK 739
+ W +K
Sbjct: 281 RKWIGELSK 289
>Z49068-9|CAA88860.1| 556|Caenorhabditis elegans Hypothetical
protein K01C8.9 protein.
Length = 556
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +2
Query: 557 RTLEKSDIVLILLDARDPLLFRCVDLEKYAKEQKCQSILLLNKADLTSEYERKCWAEY 730
+T+E +D+++ +LDARDPL R +E + + +LLLNK DL + W EY
Sbjct: 143 KTVEIADVIIQVLDARDPLGSRSKSVEDQVLKGGKRLVLLLNKIDLVPRENVQKWLEY 200
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 31.9 bits (69), Expect = 0.56
Identities = 27/85 (31%), Positives = 39/85 (45%)
Frame = -1
Query: 466 SKNVSLSRLSCSSAVTPGFHWGLRGTVRGSSKSGCDVTMATSLGTDFTYFRLSFSAVNSL 287
S +S S S +PG TVRGS+ SG VT ++ G+ + S+ SL
Sbjct: 1197 SPAISTSTQQSVSTNSPGSTVTQPSTVRGSTSSGSTVTTGSTEGSSTS----GSSSATSL 1252
Query: 286 CASSAVERNS*VKTPQSLTGDSNVP 212
+SS V S ++P T S+ P
Sbjct: 1253 SSSSPVPSTS--QSPNPSTSGSSTP 1275
>U40412-3|AAV28343.2| 381|Caenorhabditis elegans Hypothetical
protein F46G11.2 protein.
Length = 381
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 336 PSEVAIVTSQPDFDEPL-TVPRRPQWNPGVTAEEQLNRER 452
PS VTS PDFDEP P++P + ++ NR+R
Sbjct: 175 PSTEPPVTSIPDFDEPTDDEPQKPMMDDPAQLQDDDNRKR 214
>U64836-4|AAG24059.1| 417|Caenorhabditis elegans Hypothetical
protein F10G2.3 protein.
Length = 417
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -3
Query: 602 LHLTISIQYQIFLKSSITASKVPSFSHKVSLRTKLSLKFIQMP 474
+HL I + + F S+T+SKVP +++ +L LK P
Sbjct: 1 MHLLIFVLFYFFNSYSVTSSKVPVCTNEFTLINNKCLKLFTTP 43
>AF078157-5|AAN84817.1| 379|Caenorhabditis elegans Hypothetical
protein F25E5.7 protein.
Length = 379
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -2
Query: 762 KRLIRMFPLLKYSAQHFLSYSLVRS 688
KRL+ +FP S H L+Y+LVRS
Sbjct: 72 KRLVMVFPGTVISPYHILTYNLVRS 96
>Z79639-2|CAB01915.1| 367|Caenorhabditis elegans Hypothetical
protein F54E4.2 protein.
Length = 367
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/64 (23%), Positives = 33/64 (51%)
Frame = -3
Query: 215 PQSYPSFTSVVWSMVLSSTCFLLRFLENLSLMRALPRDSLFFLPIILTYTTKQGEIQLPL 36
P Y + W MV+ CF++ + N+ L+ A+ +++ + II Y+T + + +
Sbjct: 128 PIHYTTLWRSPWHMVIP--CFIVAIISNMYLLVAVKQENFQCILIIDEYSTLYNSVDVFI 185
Query: 35 TFLI 24
+ L+
Sbjct: 186 STLL 189
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical protein
ZK945.9 protein.
Length = 3178
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 142 NRNKKHVEDNTMLHTTEVNDGYDWGRLNLQSVTAES 249
N N+K+ DNT + +D +DW R +L + S
Sbjct: 2607 NINQKNYGDNTFMSIQHADDFWDWARESLATALLAS 2642
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 142 NRNKKHVEDNTMLHTTEVNDGYDWGRLNLQSVTAES 249
N N+K+ DNT + +D +DW R +L + S
Sbjct: 2607 NINQKNYGDNTFMSIQHADDFWDWARESLATALLAS 2642
>AC025726-9|AAK73924.1| 594|Caenorhabditis elegans Hypothetical
protein Y71G12B.23a protein.
Length = 594
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = -2
Query: 720 QHFLS--YSLVRSALFSNNILWHFCSLAYFSRSTH 622
QH L Y + + LF+++ ++HFC L + ++ H
Sbjct: 410 QHILMIIYGIFTTLLFTSSTVYHFCELLFRQQNKH 444
>AC025726-8|AAT81183.1| 537|Caenorhabditis elegans Hypothetical
protein Y71G12B.23b protein.
Length = 537
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = -2
Query: 720 QHFLS--YSLVRSALFSNNILWHFCSLAYFSRSTH 622
QH L Y + + LF+++ ++HFC L + ++ H
Sbjct: 410 QHILMIIYGIFTTLLFTSSTVYHFCELLFRQQNKH 444
>U49956-4|AAK77620.1| 1117|Caenorhabditis elegans Variable abnormal
morphology protein1, isoform a protein.
Length = 1117
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -2
Query: 651 SLAYFSRSTHLNNK-GSLASNNINTISDFSKVLH 553
SL F R LN+ G L SNNI+++SD + H
Sbjct: 1029 SLDDFLRQIGLNHVYGQLVSNNIHSVSDLANTSH 1062
>U49956-3|AAK77621.1| 1122|Caenorhabditis elegans Variable abnormal
morphology protein1, isoform b protein.
Length = 1122
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -2
Query: 651 SLAYFSRSTHLNNK-GSLASNNINTISDFSKVLH 553
SL F R LN+ G L SNNI+++SD + H
Sbjct: 1034 SLDDFLRQIGLNHVYGQLVSNNIHSVSDLANTSH 1067
>AY152852-1|AAN62580.1| 770|Caenorhabditis elegans suppressor of
presenilin 5 protein.
Length = 770
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = -2
Query: 228 EIQTSPIISIIHLCSVEHGIVFDMFFVAIFRESIFDEGSP---KRLFILLAHYLNLH 67
+I+ SP+ +++H + E VFD S+F EG P +++ + L HY + H
Sbjct: 193 KIEDSPMATLLHQVNFEEHGVFDF-------TSVFVEGRPLNEEKIHLFLDHYKSAH 242
>AL032636-3|CAA21604.1| 770|Caenorhabditis elegans Hypothetical
protein Y40B1B.6 protein.
Length = 770
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = -2
Query: 228 EIQTSPIISIIHLCSVEHGIVFDMFFVAIFRESIFDEGSP---KRLFILLAHYLNLH 67
+I+ SP+ +++H + E VFD S+F EG P +++ + L HY + H
Sbjct: 193 KIEDSPMATLLHQVNFEEHGVFDF-------TSVFVEGRPLNEEKIHLFLDHYKSAH 242
>AF040269-1|AAC38970.1| 1122|Caenorhabditis elegans Eph receptor
tyrosine kinase protein.
Length = 1122
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -2
Query: 651 SLAYFSRSTHLNNK-GSLASNNINTISDFSKVLH 553
SL F R LN+ G L SNNI+++SD + H
Sbjct: 1034 SLDDFLRQIGLNHVYGQLVSNNIHSVSDLANTSH 1067
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,358,516
Number of Sequences: 27780
Number of extensions: 388290
Number of successful extensions: 1091
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1087
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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