Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021116
         (799 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    25   0.81 
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    25   1.1  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    24   1.9  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   3.3  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   5.7  

>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 25.0 bits (52), Expect = 0.81
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 511 TTSSWYVSGNITERCQARCQC 573
           TTS+  VSG + ERC  +  C
Sbjct: 129 TTSTTIVSGAMAERCNFKAYC 149


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = -2

Query: 711 EMKSSSYTHPALIMEEVK--KKPYSNIFLTRSDAKHNDASNISCDNIAT 571
           E ++   ++  L  EE K  KK   ++ + R+D   +  SN+ CD  +T
Sbjct: 107 ECENKEKSNVCLKFEEQKRRKKSLDDVKILRNDRIDSYKSNLKCDKCST 155


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +2

Query: 710 SKSILLVKGSFEYFVNSLHQKDQN 781
           +K ++LVK S  +FV  +++K +N
Sbjct: 46  TKDLILVKKSTAHFVKDIYEKYKN 69


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = +1

Query: 217 HRGSCVGNLEEIRYCKRNILREFMNMRYRRTECLIQDI 330
           HR       E +R  +  ++    ++R RRTEC+   +
Sbjct: 229 HRNLEATESENVRPRRNVLIERAKSIRARRTECVTNSV 266


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +2

Query: 2   RCSEANVTASGSAPAKVSRPISDSQNLLRAPRISS 106
           RCS      S    +++S  IS ++ LLR   ISS
Sbjct: 20  RCSRDWFRISAGCVSRISNRISRNRVLLRGQCISS 54


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 241,443
Number of Sequences: 438
Number of extensions: 5889
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25246416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)