Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021114
(695 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31134| Best HMM Match : Kinesin (HMM E-Value=0) 127 7e-30
SB_9532| Best HMM Match : No HMM Matches (HMM E-Value=.) 96 2e-20
SB_51895| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 7e-14
SB_4417| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_21941| Best HMM Match : Kinesin (HMM E-Value=0) 62 3e-10
SB_3185| Best HMM Match : Sec63 (HMM E-Value=0) 61 7e-10
SB_24730| Best HMM Match : Kinesin (HMM E-Value=2.3e-17) 60 1e-09
SB_12412| Best HMM Match : Kinesin (HMM E-Value=6.3e-15) 60 2e-09
SB_12462| Best HMM Match : Kinesin (HMM E-Value=0) 60 2e-09
SB_40388| Best HMM Match : Kinesin (HMM E-Value=0) 58 5e-09
SB_51040| Best HMM Match : Kinesin (HMM E-Value=5.89947e-43) 58 7e-09
SB_11767| Best HMM Match : Kinesin (HMM E-Value=0) 55 6e-08
SB_51400| Best HMM Match : Kinesin (HMM E-Value=0) 54 8e-08
SB_39336| Best HMM Match : Kinesin (HMM E-Value=0) 54 8e-08
SB_44099| Best HMM Match : Kinesin (HMM E-Value=0.002) 53 2e-07
SB_32366| Best HMM Match : Kinesin (HMM E-Value=0) 53 2e-07
SB_1618| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_42855| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_23774| Best HMM Match : Kinesin (HMM E-Value=0) 47 1e-05
SB_37851| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_24029| Best HMM Match : Kinesin (HMM E-Value=2.10195e-44) 46 4e-05
SB_49862| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_31911| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_46434| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_8798| Best HMM Match : SOUL (HMM E-Value=1e-22) 44 2e-04
SB_11638| Best HMM Match : Kinesin (HMM E-Value=5.5e-10) 43 2e-04
SB_24652| Best HMM Match : Kinesin (HMM E-Value=3) 40 0.001
SB_54210| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_20166| Best HMM Match : Kinesin (HMM E-Value=0) 38 0.006
SB_53527| Best HMM Match : zf-C3HC4 (HMM E-Value=3.3e-12) 38 0.008
SB_25538| Best HMM Match : Kinesin (HMM E-Value=0) 37 0.014
SB_19548| Best HMM Match : Kinesin (HMM E-Value=0.00038) 36 0.024
SB_45045| Best HMM Match : Kinesin (HMM E-Value=0) 36 0.031
SB_11212| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.041
SB_59108| Best HMM Match : Kinesin (HMM E-Value=1.4e-07) 35 0.072
SB_29744| Best HMM Match : Kinesin (HMM E-Value=6.3e-30) 33 0.17
SB_19503| Best HMM Match : Kinesin (HMM E-Value=9.5e-14) 33 0.17
SB_39633| Best HMM Match : CX (HMM E-Value=2.6) 33 0.29
SB_57118| Best HMM Match : TMS_TDE (HMM E-Value=0) 33 0.29
SB_23139| Best HMM Match : Flotillin (HMM E-Value=0.11) 31 0.67
SB_36042| Best HMM Match : Kinesin (HMM E-Value=0) 31 0.89
SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_7301| Best HMM Match : S-antigen (HMM E-Value=2.1) 31 0.89
SB_39634| Best HMM Match : Kinesin (HMM E-Value=9.9e-39) 31 1.2
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_4337| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_2606| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_12394| Best HMM Match : Kinesin (HMM E-Value=1.3e-38) 28 6.3
SB_9137| Best HMM Match : SCP (HMM E-Value=3.6e-18) 28 6.3
SB_48138| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_24754| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36) 28 6.3
SB_47821| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_47077| Best HMM Match : Kinesin (HMM E-Value=1.7e-27) 28 8.3
SB_37975| Best HMM Match : UBA (HMM E-Value=4.6e-10) 28 8.3
SB_4632| Best HMM Match : DUF548 (HMM E-Value=4.4) 28 8.3
SB_48078| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_44477| Best HMM Match : IBR (HMM E-Value=0.00086) 28 8.3
SB_29823| Best HMM Match : Metallothio (HMM E-Value=2.6) 28 8.3
>SB_31134| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 727
Score = 127 bits (307), Expect = 7e-30
Identities = 62/80 (77%), Positives = 69/80 (86%)
Frame = +1
Query: 253 QSLLALKECIRALGMKGNNHLPFRVSKLTQVLRDSFIGDKSRTCMIAMISPAMASCEHSL 432
+SLLALKECIRALG KG HLPFR SKLTQVLRDSFIG+ S+TCMIAMISP M+ CEH+L
Sbjct: 497 KSLLALKECIRALGRKGA-HLPFRASKLTQVLRDSFIGENSKTCMIAMISPGMSCCEHTL 555
Query: 433 NTLRYADRVKELGTMDPSRR 492
NTLRYADRVKELG +R+
Sbjct: 556 NTLRYADRVKELGPEKRNRK 575
Score = 96.7 bits (230), Expect = 2e-20
Identities = 50/69 (72%), Positives = 57/69 (82%), Gaps = 6/69 (8%)
Frame = +2
Query: 65 TSGQTSANSNSSRSHAVFQIVVRSPGMHR------VHGKFSLIDLAGNERGADTSSANRQ 226
TSGQTSAN NSSRSHAVFQIV+R G + ++GKFSLIDLAGNERGADTS+A+RQ
Sbjct: 428 TSGQTSANQNSSRSHAVFQIVLRKRGYAKDGSGGHLYGKFSLIDLAGNERGADTSTADRQ 487
Query: 227 TRMESAEIN 253
TR+E AEIN
Sbjct: 488 TRLEGAEIN 496
Score = 38.3 bits (85), Expect = 0.006
Identities = 13/28 (46%), Positives = 22/28 (78%)
Frame = +3
Query: 570 DMSAEMYTFHEAIDELQRAEEEVLDNHK 653
D S ++YTFHEA+ +L E++++D+HK
Sbjct: 624 DNSQDLYTFHEAVSQLNDIEDKIIDDHK 651
>SB_9532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1339
Score = 96.3 bits (229), Expect = 2e-20
Identities = 47/68 (69%), Positives = 59/68 (86%)
Frame = +1
Query: 253 QSLLALKECIRALGMKGNNHLPFRVSKLTQVLRDSFIGDKSRTCMIAMISPAMASCEHSL 432
QSLLALKECIR+L + + H PFR SKLTQVL+DSF+G+ + TCMIA ISP+++SCE++L
Sbjct: 397 QSLLALKECIRSLDQE-SRHTPFRQSKLTQVLKDSFVGN-TMTCMIANISPSLSSCENTL 454
Query: 433 NTLRYADR 456
NTLRYADR
Sbjct: 455 NTLRYADR 462
Score = 67.7 bits (158), Expect = 8e-12
Identities = 30/63 (47%), Positives = 44/63 (69%)
Frame = +2
Query: 65 TSGQTSANSNSSRSHAVFQIVVRSPGMHRVHGKFSLIDLAGNERGADTSSANRQTRMESA 244
++G T N++SSRSHA+ Q+ +++ G+FS IDLAG+ER D + ++QTRME A
Sbjct: 334 STGATGVNADSSRSHAILQLELKADSSGEGIGRFSFIDLAGSERAVDVTDTDKQTRMEGA 393
Query: 245 EIN 253
EIN
Sbjct: 394 EIN 396
>SB_51895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1368
Score = 74.5 bits (175), Expect = 7e-14
Identities = 39/74 (52%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Frame = +1
Query: 253 QSLLALKECIRALGMKGNN--HLPFRVSKLTQVLRDSFIGDKSRTCMIAMISPAMASCEH 426
+SLLAL CI AL K N H+P+R SKLT++L+DS +G +T MIA +SP+M S E
Sbjct: 620 KSLLALGNCINALADKENKSGHIPYRNSKLTRLLKDS-LGGNCKTVMIAAVSPSMLSYED 678
Query: 427 SLNTLRYADRVKEL 468
+ NTL+YADR K +
Sbjct: 679 TYNTLKYADRAKSI 692
Score = 47.2 bits (107), Expect = 1e-05
Identities = 33/69 (47%), Positives = 41/69 (59%), Gaps = 6/69 (8%)
Frame = +2
Query: 65 TSGQTSANSNSSRSHAVFQIVV----RSPGMH-RVH-GKFSLIDLAGNERGADTSSANRQ 226
T T AN+ SSRSHAVFQ+ V R+ G+ V K SLIDLAG+ER T++ +
Sbjct: 552 TQHPTDANAQSSRSHAVFQVFVRQKDRTAGLKANVRLAKMSLIDLAGSERATVTTNRGAR 611
Query: 227 TRMESAEIN 253
R E A IN
Sbjct: 612 FR-EGANIN 619
>SB_4417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 64.1 bits (149), Expect = 1e-10
Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Frame = +1
Query: 253 QSLLALKECIRALGMKGNN---HLPFRVSKLTQVLRDSFIGDKSRTCMIAMISPAMASCE 423
+ LL L I AL + N H+P+R SKLT++L+DS +G S T M+A +SPA ++ E
Sbjct: 169 KGLLCLGNVISALSDEQRNPSTHVPYRDSKLTRLLQDS-LGGNSNTLMLACVSPADSNYE 227
Query: 424 HSLNTLRYADRVKEL 468
+LNTLRYADR + +
Sbjct: 228 ETLNTLRYADRARHI 242
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Frame = +2
Query: 68 SGQTSANSNSSRSHAVFQIVV--RSPGMHR--VHGKFSLIDLAGNERGADTSSANRQTRM 235
+G T+ NS SSRSHA++ I++ R G+ KF L+DLAG+ER T++ + +
Sbjct: 104 TGATAMNSRSSRSHAIYTIIMEQRGKGIDSDVRKAKFHLVDLAGSERVKKTNAQGERFK- 162
Query: 236 ESAEIN 253
E IN
Sbjct: 163 EGVNIN 168
>SB_21941| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 791
Score = 62.5 bits (145), Expect = 3e-10
Identities = 34/71 (47%), Positives = 47/71 (66%)
Frame = +1
Query: 256 SLLALKECIRALGMKGNNHLPFRVSKLTQVLRDSFIGDKSRTCMIAMISPAMASCEHSLN 435
SL AL I AL + H+P+R SKLT++L+DS +G S+T M+A ISP + E +L+
Sbjct: 543 SLSALGNVISALVDGKSKHIPYRDSKLTRLLQDS-LGGNSKTLMVACISPGSNNYEETLS 601
Query: 436 TLRYADRVKEL 468
TLRYA R K +
Sbjct: 602 TLRYAKRAKNI 612
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Frame = +2
Query: 71 GQTSANSNSSRSHAVF----QIVVRSPGMHRV--HGKFSLIDLAGNERGADTSSANRQTR 232
G T N++SSRSH++F Q+ V G +GK +L+DLAG+ER + + + + R
Sbjct: 476 GSTCMNTDSSRSHSIFIIDLQVNVNKGGEGECVRNGKLNLVDLAGSERQSKSGATGERFR 535
Query: 233 MESAEIN 253
E+ +IN
Sbjct: 536 -EATKIN 541
>SB_3185| Best HMM Match : Sec63 (HMM E-Value=0)
Length = 2590
Score = 61.3 bits (142), Expect = 7e-10
Identities = 33/72 (45%), Positives = 51/72 (70%)
Frame = +1
Query: 253 QSLLALKECIRALGMKGNNHLPFRVSKLTQVLRDSFIGDKSRTCMIAMISPAMASCEHSL 432
QSLL L I +L ++ H+P+R SKLT++L+DS +G +++T +IA ISPA+ + E +L
Sbjct: 139 QSLLTLGRVITSL-VERAPHVPYRESKLTRLLQDS-LGGRTKTSIIATISPALCNIEETL 196
Query: 433 NTLRYADRVKEL 468
+TL YA R K +
Sbjct: 197 STLDYAHRAKNI 208
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Frame = +2
Query: 77 TSANSNSSRSHAVFQIVVRSP-----GMHRVH-GKFSLIDLAGNERGADTSSANRQTRME 238
T N++SSRSH++F + + G + GK +L+DLAG+E + + +++ R E
Sbjct: 75 TLMNAHSSRSHSLFSVTIHIKENSVNGEELLKIGKLNLVDLAGSENVGRSGAVDKRLR-E 133
Query: 239 SAEIN 253
+ IN
Sbjct: 134 AGTIN 138
>SB_24730| Best HMM Match : Kinesin (HMM E-Value=2.3e-17)
Length = 602
Score = 60.5 bits (140), Expect = 1e-09
Identities = 44/105 (41%), Positives = 59/105 (56%), Gaps = 11/105 (10%)
Frame = +1
Query: 211 LRQPTDQNG---KRGDQQSLLALK-ECIRALG--MKGNNHLPFRVSKLTQVLRDSFIGDK 372
L P D++G +R + S + L CI AL K H+P+R SKLT++L DS GD
Sbjct: 77 LCDPDDESGFSIQRHGKLSFVDLAGNCISALSDQKKRAGHIPYRDSKLTKLLADSLGGD- 135
Query: 373 SRTCMIAMISPAMASCEHSLNTLRYADRVKELGT-----MDPSRR 492
T MIA ISP+ + +LNTLRYA+R K++ MDP R
Sbjct: 136 GVTLMIACISPSSSVVSDTLNTLRYANRAKKIKNKPVVQMDPKER 180
>SB_12412| Best HMM Match : Kinesin (HMM E-Value=6.3e-15)
Length = 1001
Score = 60.1 bits (139), Expect = 2e-09
Identities = 34/72 (47%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Frame = +1
Query: 259 LLALKECIRALG--MKGNNHLPFRVSKLTQVLRDSFIGDKSRTCMIAMISPAMASCEHSL 432
LLAL I ALG K +H+P+R SKLT++L+DS +G S T MIA +SP+ +L
Sbjct: 53 LLALGNVISALGDVTKKGSHVPYRDSKLTRLLQDS-LGGNSCTLMIACVSPSDRDFMETL 111
Query: 433 NTLRYADRVKEL 468
NTL+YA+R + +
Sbjct: 112 NTLKYANRARNI 123
>SB_12462| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 803
Score = 59.7 bits (138), Expect = 2e-09
Identities = 32/71 (45%), Positives = 48/71 (67%)
Frame = +1
Query: 256 SLLALKECIRALGMKGNNHLPFRVSKLTQVLRDSFIGDKSRTCMIAMISPAMASCEHSLN 435
SL AL I AL H+P+R SKLT++L+DS +G ++T M+A +SPA + + +L+
Sbjct: 265 SLSALGNVISALVDGKAKHIPYRDSKLTRLLQDS-LGGNTKTLMVACLSPADNNYDETLS 323
Query: 436 TLRYADRVKEL 468
TLRYA+R K +
Sbjct: 324 TLRYANRAKNI 334
Score = 41.1 bits (92), Expect = 8e-04
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Frame = +2
Query: 71 GQTSANSNSSRSHAVFQIVVR-----SPGMHRVH-GKFSLIDLAGNERGADTSSANRQTR 232
G T N++SSRSH++F I + S G + GK +L+DLAG+ER + T + + +
Sbjct: 198 GATLMNADSSRSHSIFSINLEILDDDSEGNEHIRAGKLNLVDLAGSERQSKTGATGGRLK 257
Query: 233 MESAEIN 253
E+ +IN
Sbjct: 258 -EATKIN 263
>SB_40388| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 500
Score = 58.4 bits (135), Expect = 5e-09
Identities = 38/104 (36%), Positives = 60/104 (57%), Gaps = 9/104 (8%)
Frame = +1
Query: 184 GQRARRRHLLRQPTDQNGKRGDQQSLLALKECIRALGMKGNNH---------LPFRVSKL 336
G +AR L T++ G ++ SL L + I AL + ++H +P+R S L
Sbjct: 130 GNKARHDELSSLTTEKEGANINK-SLTTLGKVISALAEQSSHHHKKKRRSDFIPYRDSTL 188
Query: 337 TQVLRDSFIGDKSRTCMIAMISPAMASCEHSLNTLRYADRVKEL 468
T +L+++ +G S+T MIA +SPA + E +L+TLRYADR K +
Sbjct: 189 TWLLKEN-LGGNSKTAMIAAVSPADINYEETLSTLRYADRAKHI 231
>SB_51040| Best HMM Match : Kinesin (HMM E-Value=5.89947e-43)
Length = 197
Score = 58.0 bits (134), Expect = 7e-09
Identities = 28/59 (47%), Positives = 43/59 (72%)
Frame = +1
Query: 292 GMKGNNHLPFRVSKLTQVLRDSFIGDKSRTCMIAMISPAMASCEHSLNTLRYADRVKEL 468
G KG + +P+R S LT +L+D+ +G S+T M+A ISP+ + E +L+TLRYADR K++
Sbjct: 127 GKKGAHFVPYRDSVLTWLLKDN-LGGNSKTVMVATISPSADNYEETLSTLRYADRAKKI 184
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Frame = +2
Query: 65 TSGQTSANSNSSRSHAVFQIVV-RSPGMHRVH------GKFSLIDLAGNERGADTSSANR 223
T T N+ SSRSHAVF I++ R+ H+ K SL+DLAG+ER T +
Sbjct: 37 TVAATRMNTESSRSHAVFNILLARTEYDHQTESIGEKVSKLSLVDLAGSERACKTGAEGD 96
Query: 224 QTRMESAEIN 253
+ + E + IN
Sbjct: 97 RLK-EGSNIN 105
>SB_11767| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 1230
Score = 54.8 bits (126), Expect = 6e-08
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Frame = +1
Query: 259 LLALKECIRALG--MKGNNHLPFRVSKLTQVLRDSFIGDKSRTCMIAMISPAMASCEHSL 432
LLAL I AL K H+P+R SK+T++L+DS +G +RT MI +SPA A +L
Sbjct: 868 LLALGNVISALADARKKILHVPYRESKVTRLLKDS-LGGNARTTMITCLSPAAADFAENL 926
Query: 433 NTLRYADR 456
NTL++A R
Sbjct: 927 NTLKFATR 934
Score = 27.1 bits (57), Expect(2) = 0.080
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 68 SGQTSANSNSSRSHAVFQIVV 130
+G T+ N SSRSHA+F + +
Sbjct: 781 TGATNMNEQSSRSHAIFTMYI 801
Score = 26.2 bits (55), Expect(2) = 0.080
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 155 HGKFSLIDLAGNERGADTSSANRQTRMESAEINS 256
+ KF +DLAG+ER T + + + ES +IN+
Sbjct: 834 YSKFHFVDLAGSERVDRTGNVGDRFK-ESVQINT 866
>SB_51400| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 455
Score = 54.4 bits (125), Expect = 8e-08
Identities = 29/69 (42%), Positives = 45/69 (65%)
Frame = +1
Query: 253 QSLLALKECIRALGMKGNNHLPFRVSKLTQVLRDSFIGDKSRTCMIAMISPAMASCEHSL 432
+SL L++ + ALG +H+P+R SKLT VL+DS IG + + +IA I + E +L
Sbjct: 272 KSLTFLEQAVIALGDNHRDHVPYRQSKLTHVLKDS-IGGRCKMMLIANIWGEASQIEETL 330
Query: 433 NTLRYADRV 459
+TLR+A R+
Sbjct: 331 STLRFASRM 339
Score = 36.3 bits (80), Expect = 0.024
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = +2
Query: 74 QTSANSNSSRSHAVFQIVVRSPGMHRVHGKF-----SLIDLAGNERGADTSSANRQTRME 238
Q S N SSRSH +F + V + + K+ +L+DLAG+ER T S T+ E
Sbjct: 208 QHSLNKRSSRSHCIFTLYVETHSRVESNTKYTLSKLNLVDLAGSERLGKTESQG-STQTE 266
Query: 239 SAEIN 253
+ IN
Sbjct: 267 AMYIN 271
>SB_39336| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 558
Score = 54.4 bits (125), Expect = 8e-08
Identities = 29/69 (42%), Positives = 45/69 (65%)
Frame = +1
Query: 253 QSLLALKECIRALGMKGNNHLPFRVSKLTQVLRDSFIGDKSRTCMIAMISPAMASCEHSL 432
+SL L++ + ALG +H+P+R SKLT VL+DS IG + + +IA I + E +L
Sbjct: 272 KSLTFLEQAVIALGDNHRDHVPYRQSKLTHVLKDS-IGGRCKMMLIANIWGEASQIEETL 330
Query: 433 NTLRYADRV 459
+TLR+A R+
Sbjct: 331 STLRFASRM 339
Score = 36.3 bits (80), Expect = 0.024
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = +2
Query: 74 QTSANSNSSRSHAVFQIVVRSPGMHRVHGKF-----SLIDLAGNERGADTSSANRQTRME 238
Q S N SSRSH +F + V + + K+ +L+DLAG+ER T S T+ E
Sbjct: 208 QHSLNKRSSRSHCIFTLYVETHSRVESNTKYTLSKLNLVDLAGSERLGKTESQG-STQTE 266
Query: 239 SAEIN 253
+ IN
Sbjct: 267 AMYIN 271
>SB_44099| Best HMM Match : Kinesin (HMM E-Value=0.002)
Length = 104
Score = 53.2 bits (122), Expect = 2e-07
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Frame = +1
Query: 292 GMKGNNH--LPFRVSKLTQVLRDSFIGDKSRTCMIAMISPAMASCEHSLNTLRYADRVKE 465
G G++H +P+R S LT +L+DS +G S+T MIA ISPA + +++TLRYA+R K
Sbjct: 8 GSHGSHHKFIPYRDSVLTWLLKDS-LGGNSKTIMIATISPADVNYAETMSTLRYANRAKN 66
Query: 466 LGTMDP-SRRGESPLP 510
+ + G S LP
Sbjct: 67 IMNKPTINELGRSNLP 82
>SB_32366| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 1492
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/59 (47%), Positives = 42/59 (71%)
Frame = +1
Query: 298 KGNNHLPFRVSKLTQVLRDSFIGDKSRTCMIAMISPAMASCEHSLNTLRYADRVKELGT 474
K N +PFR S LT++L+++ +G S+T MIA +SPA + E +L+TLR+ADR K + T
Sbjct: 303 KKNVLVPFRDSVLTKLLKNA-LGGNSKTIMIAALSPADINYEETLSTLRFADRAKAIKT 360
Score = 27.9 bits (59), Expect = 8.3
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Frame = +2
Query: 65 TSGQTSANSNSSRSHAVFQI-----VVRSPGMHRVHGKF-SLIDLAGNERGADTSSANRQ 226
T T+ N+ SSR+H + I G + +L+DLAG+ER A+++ A
Sbjct: 203 TVAATNMNATSSRAHTIVAINFIQKAKNEAGQNMTKTSVVNLVDLAGSER-AESTGATGD 261
Query: 227 TRMESAEIN 253
E + IN
Sbjct: 262 RLKEGSAIN 270
>SB_1618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1371
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/52 (46%), Positives = 39/52 (75%)
Frame = +1
Query: 313 LPFRVSKLTQVLRDSFIGDKSRTCMIAMISPAMASCEHSLNTLRYADRVKEL 468
+P+R S LT++L+++ +G S+T MIA +SPA + + +L TLRYADR K++
Sbjct: 596 VPYRDSVLTKLLQNA-LGGNSKTIMIAALSPADINYDETLGTLRYADRAKKI 646
>SB_42855| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 809
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/66 (37%), Positives = 40/66 (60%)
Frame = +1
Query: 310 HLPFRVSKLTQVLRDSFIGDKSRTCMIAMISPAMASCEHSLNTLRYADRVKELGTMDPSR 489
H+P+R SKLTQ+L+ S GD + CM +SPA + +++TL++ K++G + SR
Sbjct: 731 HVPYRNSKLTQLLQGSLGGD-GKACMFVNVSPAEWNLSETISTLQFGAGAKQVGLL--SR 787
Query: 490 RGESPL 507
R L
Sbjct: 788 RTSQDL 793
>SB_23774| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 805
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/70 (37%), Positives = 43/70 (61%)
Frame = +1
Query: 253 QSLLALKECIRALGMKGNNHLPFRVSKLTQVLRDSFIGDKSRTCMIAMISPAMASCEHSL 432
+SL AL + I AL +P+R +KLT +++DS +G ++T M +SPA + + ++
Sbjct: 701 KSLSALGDVISALS-SDQQFIPYRNNKLTMLMQDS-LGGNAKTLMFVNVSPADYNTDETV 758
Query: 433 NTLRYADRVK 462
+L YA RVK
Sbjct: 759 TSLTYASRVK 768
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Frame = +2
Query: 77 TSANSNSSRSHAVFQIVVRSPGMHR---VHGKFSLIDLAGNERGADTSSANRQTRMESAE 247
T N+ SSRSH + I++ S + + GK SL+DLAG+ER A T + Q + E+
Sbjct: 640 TEMNAESSRSHLILGIIIESTNLVSGAVIKGKLSLVDLAGSERAAKTGATAEQLK-EAQS 698
Query: 248 IN 253
IN
Sbjct: 699 IN 700
>SB_37851| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 46.0 bits (104), Expect = 3e-05
Identities = 27/71 (38%), Positives = 47/71 (66%)
Frame = +1
Query: 256 SLLALKECIRALGMKGNNHLPFRVSKLTQVLRDSFIGDKSRTCMIAMISPAMASCEHSLN 435
SL+AL I L +G + +PFR SKLT++L++S +G ++T +I I+P A+ + + +
Sbjct: 146 SLMALGTVISNLS-EGESFIPFRNSKLTRILQNS-LGGNAKTGIICTITP--AAIDETAS 201
Query: 436 TLRYADRVKEL 468
TL +A R K++
Sbjct: 202 TLNFASRAKKI 212
>SB_24029| Best HMM Match : Kinesin (HMM E-Value=2.10195e-44)
Length = 534
Score = 45.6 bits (103), Expect = 4e-05
Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Frame = +1
Query: 226 DQNGKRGD--QQSLLALKECIRALGMKGNN--HLPFRVSKLTQVLRDSFIGDKSRTCMIA 393
D N K+G + + AL I L + N H+P+R SK+T++L+DS +G + T ++
Sbjct: 161 DINVKQGVFMNKGINALNAVISTLAVAKNRDGHIPYRDSKITRILQDS-LGGSAHTAILI 219
Query: 394 MISPAMASCEHSLNTLRYADRVKEL 468
+SPA A E +L++L+ + + +
Sbjct: 220 TVSPADADYEDTLSSLQCGSKARNI 244
>SB_49862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 44.8 bits (101), Expect = 7e-05
Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Frame = +2
Query: 71 GQTSANSNSSRSHAVFQIVVRS-----PGMHRVH-GKFSLIDLAGNERGADTSSANRQTR 232
G T+ N SSRSHA+F I V G V GK L+DLAG+ER A T + + +
Sbjct: 116 GATNMNERSSRSHAIFSITVECSEKGLDGQQHVRMGKLHLVDLAGSERQAKTGATGVRLK 175
Query: 233 MESAEIN 253
E+ +IN
Sbjct: 176 -EATQIN 181
Score = 36.7 bits (81), Expect = 0.018
Identities = 20/46 (43%), Positives = 30/46 (65%)
Frame = +1
Query: 256 SLLALKECIRALGMKGNNHLPFRVSKLTQVLRDSFIGDKSRTCMIA 393
SL L I AL + H+P+R SKLT++L+DS +G S+T M++
Sbjct: 183 SLSTLGNVISALVDGKSTHIPYRNSKLTRLLQDS-LGGNSKTIMVS 227
>SB_31911| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1312
Score = 44.8 bits (101), Expect = 7e-05
Identities = 29/64 (45%), Positives = 40/64 (62%)
Frame = +1
Query: 256 SLLALKECIRALGMKGNNHLPFRVSKLTQVLRDSFIGDKSRTCMIAMISPAMASCEHSLN 435
SLL+ KE L K ++P+R S LT +L+DS +G S+T MIA +SPA +L+
Sbjct: 570 SLLSDKE----LNKKKKLYIPYRDSILTWLLKDS-LGGNSKTTMIANVSPANTHFGETLS 624
Query: 436 TLRY 447
TLRY
Sbjct: 625 TLRY 628
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 9/51 (17%)
Frame = +2
Query: 77 TSANSNSSRSHAVFQIVVR---------SPGMHRVHGKFSLIDLAGNERGA 202
T N SSRSH+VF IV+ + K +LIDLAG+ER +
Sbjct: 491 TGMNDKSSRSHSVFTIVMSQTQTEIFEDTEAQITKTSKINLIDLAGSERAS 541
>SB_46434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 873
Score = 44.8 bits (101), Expect = 7e-05
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Frame = +1
Query: 253 QSLLALKECIRALGMKGNNHLPFRVSKLTQVLRDSFIGDKSRTCMIAMISPAMASCEHSL 432
+SL +L + I L K + H+P+R SKLT +L++S GD S+T M+ ++P + ++
Sbjct: 569 KSLSSLGDVIHNLKNK-SAHVPYRNSKLTYLLQESLGGD-SKTLMVVQVAPVEKNVGETV 626
Query: 433 NTLRYADRVK--ELG 471
+L +A RV+ ELG
Sbjct: 627 CSLNFAQRVRAVELG 641
Score = 36.7 bits (81), Expect = 0.018
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Frame = +2
Query: 77 TSANSNSSRSHAVFQIVV----RSPGMHRVHGKFSLIDLAGNERGADTSSANRQTRMESA 244
T N +SSRSHA+ V R+ G + GK +L+DLAG+ER + + S + + E+
Sbjct: 508 TDMNEHSSRSHALLCATVIGVNRTTGARTI-GKLNLVDLAGSERVSKSGSEGARMK-EAQ 565
Query: 245 EIN 253
IN
Sbjct: 566 NIN 568
>SB_8798| Best HMM Match : SOUL (HMM E-Value=1e-22)
Length = 360
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/52 (40%), Positives = 36/52 (69%)
Frame = +1
Query: 313 LPFRVSKLTQVLRDSFIGDKSRTCMIAMISPAMASCEHSLNTLRYADRVKEL 468
+P+R SKLT++L+DS +G + TC+IA I+P +LNTL++A + + +
Sbjct: 12 VPYRNSKLTRLLQDS-LGGSAHTCVIANIAPEPDLYYDTLNTLKFASKSRTI 62
>SB_11638| Best HMM Match : Kinesin (HMM E-Value=5.5e-10)
Length = 208
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/52 (38%), Positives = 33/52 (63%)
Frame = +1
Query: 310 HLPFRVSKLTQVLRDSFIGDKSRTCMIAMISPAMASCEHSLNTLRYADRVKE 465
H+P+R SKLTQ+L+ S GD + CM +SPA + +++TL++ K+
Sbjct: 158 HVPYRNSKLTQLLQGSLGGD-GKACMFVNVSPAEWNLSETISTLQFGAGAKQ 208
>SB_24652| Best HMM Match : Kinesin (HMM E-Value=3)
Length = 351
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/51 (45%), Positives = 27/51 (52%)
Frame = +1
Query: 322 RVSKLTQVLRDSFIGDKSRTCMIAMISPAMASCEHSLNTLRYADRVKELGT 474
R T +DS +G T MIA +SPA E S NTL YADR K + T
Sbjct: 36 REQLFTSFTQDS-LGGNCHTVMIAHVSPASRMFEESRNTLLYADRAKSIKT 85
>SB_54210| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 474
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Frame = +2
Query: 74 QTSANSNSSRSHAVFQIVV--RSPGMHRVH-GKFSLIDLAGNERGADTSSANRQTRMESA 244
+T N SSRSH +F I++ + V+ K +++DLAG+ER ++ S N++TR +
Sbjct: 176 ETPCNGRSSRSHTIFTILLTRQEKDSEIVYKSKLNIVDLAGSERLSNEKSDNQRTRTKHI 235
Query: 245 EIN 253
++
Sbjct: 236 NLS 238
>SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1967
Score = 38.3 bits (85), Expect = 0.006
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Frame = +2
Query: 65 TSGQTSANSNSSRSHAVFQI-VVRSPGMHRVH----GKFSLIDLAGNERGADTSSANRQT 229
T T N SSRSH +F I ++R + H + S +DLAG+ER + T S +
Sbjct: 307 TIASTKLNHQSSRSHCIFSIKILRVVNVDNPHVARVSRLSFVDLAGSERYSKTQSTGDRL 366
Query: 230 RMESAEINS 256
+ E+ IN+
Sbjct: 367 K-EAGNINT 374
Score = 33.1 bits (72), Expect = 0.22
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Frame = +1
Query: 256 SLLALKECIRALGMKG---NNH--LPFRVSKLTQVLRDSFIGDKSRTCMIAMISPAMASC 420
SL+ L +C+ L NN +PFR SKLT++ + F G K + M+ I+ ++
Sbjct: 375 SLMTLGKCLDYLRYNQQHPNNPQMIPFRESKLTRLFQGFFCG-KGKAAMVVNINQCASTF 433
Query: 421 EHSLNTLRYADRVKELGT 474
+ + + L+++ K++ T
Sbjct: 434 DETYHALKFSAIAKQVTT 451
>SB_20166| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 378
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = +1
Query: 280 IRALGMKGNNHLPFRVSKLTQVLRDSFIGDKSRTCMIAMISPAMASCEHSLNTLRYADRV 459
I AL H+P+R S LT++L+D +GD +T I I+P+++ + +L + R
Sbjct: 219 IHALARGNKRHVPYRNSTLTRLLQDC-LGDNGKTNFIVCIAPSLSEVNETKCSLNFGLRA 277
Query: 460 KEL 468
+
Sbjct: 278 MRI 280
>SB_53527| Best HMM Match : zf-C3HC4 (HMM E-Value=3.3e-12)
Length = 1290
Score = 37.9 bits (84), Expect = 0.008
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 STVPPGTEGVH-PRAGHEGQQPPALPRVQAHAGPARQLHRGQVSHLHDRHDLAGHGLLRA 425
S+ PPGT+G P GH+GQ P +PR Q + H+GQV +H +
Sbjct: 957 SSHPPGTKGKFIPSPGHKGQVHP-IPRAQRASSSHPPGHKGQVHSIHRAQRASSSHPTGH 1015
Query: 426 QPQHAPIRRQGEGARHH 476
+ Q PI R + H
Sbjct: 1016 KGQVHPIPRAQRASSSH 1032
>SB_25538| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 711
Score = 37.1 bits (82), Expect = 0.014
Identities = 17/47 (36%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Frame = +2
Query: 77 TSANSNSSRSHAVFQIVVRSPGMH---RVHGKFSLIDLAGNERGADT 208
T+ N +SSRSH++F + ++ + ++ GK L+DLAG+E+ + T
Sbjct: 148 TNMNEHSSRSHSIFLLHIKQENVETNKKLSGKLYLVDLAGSEKVSKT 194
>SB_19548| Best HMM Match : Kinesin (HMM E-Value=0.00038)
Length = 99
Score = 36.3 bits (80), Expect = 0.024
Identities = 20/45 (44%), Positives = 29/45 (64%)
Frame = +1
Query: 256 SLLALKECIRALGMKGNNHLPFRVSKLTQVLRDSFIGDKSRTCMI 390
SL L I AL + H+P+R SKLT++L+DS +G S+T M+
Sbjct: 24 SLSTLGNVISALVDGKSTHIPYRNSKLTRLLQDS-LGGNSKTIMV 67
>SB_45045| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 1260
Score = 35.9 bits (79), Expect = 0.031
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = +1
Query: 256 SLLALKECIRALGMKGNNHLPFRVSKLTQVLRDSFIGDKSRTCMI 390
SLL L I AL H+PFR S LT++L+DS +G +T +
Sbjct: 519 SLLELGNTIHALSEGTRTHIPFRNSSLTRILQDS-LGGNCKTSFV 562
>SB_11212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1175
Score = 35.5 bits (78), Expect = 0.041
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 6/57 (10%)
Frame = +2
Query: 71 GQTSANSNSSRSHAVFQIVVRSPGMHRV-----HGKFSLIDLAGNER-GADTSSANR 223
G T+ N SSRSH+VF +++ G + + G +L+DLAG+ER G +S +R
Sbjct: 429 GATACNERSSRSHSVF--IMKLTGENSITEESCSGTLNLVDLAGSERLGQSCASGDR 483
Score = 32.7 bits (71), Expect = 0.29
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +1
Query: 310 HLPFRVSKLTQVLRDSFIGDKSR---TCMIAMISPAMASCEHSLNTLRYADRVKELGTMD 480
H+P+R SKLT +L++S G+ R I P E L R R T+
Sbjct: 536 HVPYRNSKLTYLLKNSLGGNSKRYNQGTEPLWIRPGQTYAEDILTYNRNPPRPARGQTLP 595
Query: 481 PSRRGESPL-PTWT 519
+ G++PL P WT
Sbjct: 596 RAPGGQNPLRPPWT 609
>SB_59108| Best HMM Match : Kinesin (HMM E-Value=1.4e-07)
Length = 98
Score = 34.7 bits (76), Expect = 0.072
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +1
Query: 304 NNHLPFRVSKLTQVLRDSFIGDKSRTCMIAMISPA 408
N H+ +R SKLT +LRDS +G +RT +IA + P+
Sbjct: 63 NRHIHYRDSKLTFLLRDS-LGGNARTYIIANVHPS 96
>SB_29744| Best HMM Match : Kinesin (HMM E-Value=6.3e-30)
Length = 291
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +2
Query: 74 QTSANSNSSRSHAVFQIVVRSPGMHRVHGKFSLIDLAGNE 193
+T N +SSRSHA+ QI V + + HG F LA +E
Sbjct: 154 ETKMNRHSSRSHAICQIKVERLNLPKSHGVFDDAYLASSE 193
>SB_19503| Best HMM Match : Kinesin (HMM E-Value=9.5e-14)
Length = 869
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 256 SLLALKECIRALGMKGNNHLPFRVSKLTQVLRD 354
SL L++ I AL K +H+P+R S +T VLRD
Sbjct: 176 SLHFLEQVIVALSEKSRSHIPYRNSMMTSVLRD 208
>SB_39633| Best HMM Match : CX (HMM E-Value=2.6)
Length = 306
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +1
Query: 385 MIAMISPAMASCEHSLNTLRYADRVKEL 468
MIA ISPA + +L+TLRYA+R K +
Sbjct: 1 MIAAISPADVNYSETLSTLRYANRAKNI 28
>SB_57118| Best HMM Match : TMS_TDE (HMM E-Value=0)
Length = 1457
Score = 32.7 bits (71), Expect = 0.29
Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 12/73 (16%)
Frame = +2
Query: 74 QTSANSNSSRSHAVFQI-VVRSP----GMHRVH-------GKFSLIDLAGNERGADTSSA 217
QT N SSRSH+VF I VV++P G + SL DLAG+ER T++
Sbjct: 47 QTVLNQESSRSHSVFAIKVVQAPLDPDGEQILQDCDQVAVSTLSLCDLAGSERTKRTNAG 106
Query: 218 NRQTRMESAEINS 256
+ R E+ INS
Sbjct: 107 GDRLR-EAGNINS 118
>SB_23139| Best HMM Match : Flotillin (HMM E-Value=0.11)
Length = 1166
Score = 31.5 bits (68), Expect = 0.67
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = +3
Query: 474 HGPVPARRVSAADVDM-LPARDDLAHLRSLNDGDMSAEMYTFHEAIDEL-QRAEEEVLDN 647
HGP P++ +S DV + P L + + +A E + L +R +E +
Sbjct: 399 HGPTPSKELSKEDVTLSKPIDTGLTDHEVESMVEQTAMEVLIQEGLQTLRKRGQEAIAAQ 458
Query: 648 HKAVSDYMHH 677
HKA +HH
Sbjct: 459 HKATEAVLHH 468
>SB_36042| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 292
Score = 31.1 bits (67), Expect = 0.89
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 17/80 (21%)
Frame = +2
Query: 65 TSGQTSANSNSSRSHAVFQIVVRSPGMHRV-----------------HGKFSLIDLAGNE 193
T+ T+ N++SSRSHA+F I ++ + ++ KF+ +DLAG+E
Sbjct: 211 TTASTNMNTHSSRSHAIFTIHIKQQRVVKISNNEPTKGGEDYEYEMLSAKFNFVDLAGSE 270
Query: 194 RGADTSSANRQTRMESAEIN 253
R T + + + E IN
Sbjct: 271 RLKRTGATGDRAK-EGISIN 289
>SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1283
Score = 31.1 bits (67), Expect = 0.89
Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 6/57 (10%)
Frame = +3
Query: 336 HAGPARQLHRGQVSHLHDRHDLAGH---GLLRAQPQHAPIRRQGE---GARHHGPVP 488
H P R LH H HD D H GL+ Q +H R+ G H GP P
Sbjct: 931 HDHPDRHLHEHPDRHPHDHPDRLTHDRPGLIMGQDRHMADYREPHREPGGVHEGPFP 987
>SB_7301| Best HMM Match : S-antigen (HMM E-Value=2.1)
Length = 682
Score = 31.1 bits (67), Expect = 0.89
Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 6/57 (10%)
Frame = +3
Query: 336 HAGPARQLHRGQVSHLHDRHDLAGH---GLLRAQPQHAPIRRQGE---GARHHGPVP 488
H P R LH H HD D H GL+ Q +H R+ G H GP P
Sbjct: 64 HDHPDRHLHEHPDRHPHDHPDRLTHDRPGLIMGQDRHMADYREPHREPGGVHEGPFP 120
>SB_39634| Best HMM Match : Kinesin (HMM E-Value=9.9e-39)
Length = 244
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
Frame = +1
Query: 292 GMKGNNH--LPFRVSKLTQVLRDSFIGDKSRTCMIA 393
G G++H +P+R S LT +L+DS +G S+T MIA
Sbjct: 196 GSHGSHHKFIPYRDSVLTWLLKDS-LGGNSKTIMIA 230
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 29.5 bits (63), Expect = 2.7
Identities = 27/82 (32%), Positives = 32/82 (39%)
Frame = +3
Query: 258 PPGTEGVHPRAGHEGQQPPALPRVQAHAGPARQLHRGQVSHLHDRHDLAGHGLLRAQPQH 437
PPGT HPR G P +P A P ++L H R G R P
Sbjct: 583 PPGTP--HPRVPPPGAPHPKVPPPGA---PYQRLPYSGA--YHPRLPPPGPPYQRVPPPG 635
Query: 438 APIRRQGEGARHHGPVPARRVS 503
API+R HH VP R +
Sbjct: 636 APIQRVPLPETHHQRVPYSRAT 657
>SB_4337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 423
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 258 PPGTEGVHPRAGHEGQQPPALPRVQAHAGPA 350
PPG +G P AG +G PP + Q +GP+
Sbjct: 316 PPGQQGYGPPAGQQGYGPPQ-GQQQGFSGPS 345
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 258 PPGTEGVHPRAGHEGQQPPALPRVQAHAGPARQ 356
PPG +G P G +G PP P Q + P Q
Sbjct: 280 PPGQQGYGPPPGQQGYGPP--PGQQGYGSPPGQ 310
>SB_2606| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1352
Score = 29.1 bits (62), Expect = 3.6
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Frame = +1
Query: 247 DQQSLLALKE-----CIRALGMKGNNHLPFRVSKLTQVLRDSFIGDKSRTCMIAMISPAM 411
DQ+ L LKE L G H+ RV KL V G + +T A PA
Sbjct: 659 DQKKRLELKERPDTGVYVKLNAVGECHI--RVGKLNMV---DLAGSERQTKTEAT-GPAS 712
Query: 412 ASCEHSLNTLRYADRVKEL 468
+ E S+ TLRYA+R K +
Sbjct: 713 YNYEESITTLRYANRAKNI 731
>SB_12394| Best HMM Match : Kinesin (HMM E-Value=1.3e-38)
Length = 256
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 77 TSANSNSSRSHAVFQIVVRS 136
TS N SSRSHAVF + ++S
Sbjct: 236 TSMNRESSRSHAVFTVTLQS 255
>SB_9137| Best HMM Match : SCP (HMM E-Value=3.6e-18)
Length = 708
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 261 PGTEGVHPRAGHEGQQPPALP 323
PG E +HP+ HEG Q +P
Sbjct: 467 PGVEMLHPQISHEGDQRHGIP 487
>SB_48138| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1913
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 285 RAGHEGQQPPALPRVQAHAGP 347
R+G EG PP LPR AGP
Sbjct: 1055 RSGAEGAAPPPLPRPYTGAGP 1075
>SB_24754| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36)
Length = 781
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = -3
Query: 282 DALLQCQEGLLISALSILVCRLAEEVSAPRSLPARSMSENFPCTRCMPGDRTTIWNTA 109
D ++ GLL+ AL++ V S A M+ P RC +RTT W A
Sbjct: 554 DQMMVLVAGLLLGALNMEVSLQRFFQLQTISSMALGMTAILPSLRCFGNNRTTFWREA 611
>SB_47821| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 869
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 393 HDLAG-HGLLRAQPQHAPIRRQGEGARHH--GPVPARRVSAADVDMLPARDDLAHL 551
H++AG H ++ HAP RRQ A+ H G P +D L + LA L
Sbjct: 283 HNMAGGHPRVQHATDHAPPRRQSTPAKVHAEGAAPTLSSEKSDHTALKPGEKLAQL 338
>SB_47077| Best HMM Match : Kinesin (HMM E-Value=1.7e-27)
Length = 212
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 65 TSGQTSANSNSSRSHAVFQ 121
TS T+AN SSRSHA+ Q
Sbjct: 194 TSEPTAANKTSSRSHAILQ 212
>SB_37975| Best HMM Match : UBA (HMM E-Value=4.6e-10)
Length = 473
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -3
Query: 372 LVPDEAVSQDLRELGHAEGQVVVALHAQRADAL--LQCQEGLLISALSILVCRLAEEVS 202
+ P+E +SQ RELG ++ + AL R AL L ++ S L+ + LA + S
Sbjct: 40 IYPEELISQYTRELGFSKPTIAEALEHLRTHALEKLSAKKRFQASGLASIRVHLAGQHS 98
>SB_4632| Best HMM Match : DUF548 (HMM E-Value=4.4)
Length = 330
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 393 HDLAG-HGLLRAQPQHAPIRRQGEGARHH--GPVPARRVSAADVDMLPARDDLAHL 551
H++AG H ++ HAP RRQ A+ H G P +D L + LA L
Sbjct: 209 HNMAGGHPRVQHATDHAPPRRQSTPAKVHAEGAAPTLSSEKSDHTALKPGEKLAQL 264
>SB_48078| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 227
Score = 27.9 bits (59), Expect = 8.3
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = +1
Query: 163 VLAHRPGGQRARRRHLLRQPTDQNGKRGDQQSLLALKECI--RALGMKG-NNHLPFRVSK 333
+++ P +R H Q NGK + ++ +LKE + RAL G N L R+ K
Sbjct: 60 LISGNPSNERDEALHSDLQEPQLNGKNLESNTVTSLKEELTRRALSTAGKKNDLVSRLRK 119
Query: 334 -LTQVLRDSFIGDK 372
+ V++D F +
Sbjct: 120 AMASVVKDRFAASR 133
>SB_44477| Best HMM Match : IBR (HMM E-Value=0.00086)
Length = 627
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 309 PPALPRVQAHAGPARQLHRGQVSHLHDRHDLAGHGLLRAQPQHAP 443
PPALP A+ GP Q H + H LA + + P+H+P
Sbjct: 118 PPALPLKPAN-GPPLQEAAFSSRHTVEVHGLAHPSITQPPPRHSP 161
>SB_29823| Best HMM Match : Metallothio (HMM E-Value=2.6)
Length = 812
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 393 HDLAG-HGLLRAQPQHAPIRRQGEGARHH--GPVPARRVSAADVDMLPARDDLAHL 551
H++AG H ++ HAP RRQ A+ H G P +D L + LA L
Sbjct: 218 HNMAGGHPRVQHATDHAPPRRQSTPAKVHAEGAAPTLSSEKSDHTALKPGEKLAQL 273
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,229,488
Number of Sequences: 59808
Number of extensions: 369649
Number of successful extensions: 1649
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 1408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1612
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1817559367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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