Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021113
(685 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 42 6e-05
SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces pombe... 37 0.002
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 36 0.007
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 32 0.067
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 31 0.20
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 30 0.36
SPAPJ696.02 |||actin cortical patch component Lsb4 |Schizosaccha... 29 0.63
SPBC11C11.02 |imp2||contractile ring protein Imp2|Schizosaccharo... 29 0.83
SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces po... 28 1.1
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 1.1
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 3.3
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 27 3.3
SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces ... 27 3.3
SPAC13D6.02c |byr3||zinc finger protein Byr3|Schizosaccharomyces... 26 4.4
SPBC428.05c |arg12||argininosuccinate synthase |Schizosaccharomy... 26 4.4
SPAC1F5.05c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 5.8
SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1 |S... 25 7.7
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 25 7.7
SPCC162.09c |hmg1||3-hydroxy-3-methylglutaryl-CoA reductase|Schi... 25 7.7
SPAC3F10.05c |mug113||DUF1766 family protein|Schizosaccharomyces... 25 7.7
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 42.3 bits (95), Expect = 6e-05
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +3
Query: 261 WWRGELRGNRGIFPDNFVSLLNEYA 335
WWRGEL G GIFP N+V LL + A
Sbjct: 177 WWRGELNGKEGIFPSNYVRLLEDSA 201
>SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 871
Score = 37.1 bits (82), Expect = 0.002
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +3
Query: 258 GWWRGE-LRGNRGIFPDNFVSLLNEYATTRSTGVQGR 365
GWW GE +GNRGIFP + V L+++ + S +G+
Sbjct: 41 GWWEGEDEQGNRGIFPASHVELISDERSDSSDSRRGK 77
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 35.5 bits (78), Expect = 0.007
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 261 WWRGELRGNRGIFPDNFV 314
WW GE G+RG+FP N+V
Sbjct: 837 WWEGECHGHRGLFPSNYV 854
Score = 33.9 bits (74), Expect = 0.022
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 8/52 (15%)
Frame = +3
Query: 258 GWWRGE-LRGNRGIFPDNFVSLL-------NEYATTRSTGVQGRCRALYSYQ 389
GWW GE +G +G+FP N+V + N A ++ G +A+Y YQ
Sbjct: 761 GWWLGENSKGQQGLFPSNYVEITGPNETANNPPAEPQAGGPGKSVKAIYDYQ 812
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 32.3 bits (70), Expect = 0.067
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = -3
Query: 296 NAAVST*LASPPAPGNLSTSLITSPGLIVSSSASDASYAKLTVQDT 159
N+ VST LASP + TSL+ + S+S+S AS A TV +
Sbjct: 411 NSGVSTLLASPTSSSTFVTSLLRRSSIDGSASSSSASLAVPTVSSS 456
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 30.7 bits (66), Expect = 0.20
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 261 WWRGELRGNRGIFPDNFVSL 320
WW G L G +G FP N+V L
Sbjct: 446 WWIGRLNGAQGQFPGNYVQL 465
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 29.9 bits (64), Expect = 0.36
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 4/23 (17%)
Frame = +3
Query: 258 GWWRGEL----RGNRGIFPDNFV 314
GWW GE+ RG+FP NFV
Sbjct: 902 GWWDGEIINVPNSKRGLFPSNFV 924
>SPAPJ696.02 |||actin cortical patch component Lsb4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 29.1 bits (62), Expect = 0.63
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 261 WWRGELRGNRGIFPDNFVSL 320
WW G + GIFP N+V L
Sbjct: 410 WWTGRIGYREGIFPANYVKL 429
>SPBC11C11.02 |imp2||contractile ring protein
Imp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 670
Score = 28.7 bits (61), Expect = 0.83
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 4/23 (17%)
Frame = +3
Query: 258 GWWRGELRG----NRGIFPDNFV 314
GWW G + G NRG FP NFV
Sbjct: 643 GWWEGFVVGEDDHNRGQFPSNFV 665
>SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 373
Score = 28.3 bits (60), Expect = 1.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 261 WWRGELRGNRGIFPDNFVSLLNE 329
WW+G + GIFP N+V + E
Sbjct: 252 WWKGSCKNAVGIFPVNYVQRVVE 274
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 178 FAYDASEADELTIRPGDVISDVERLPGAGGEASYVETAAFSRTTSF 315
+ Y +S +D+L PG VI V L G +YV++ + SF
Sbjct: 12 YPYRSSFSDDLEFDPGQVIDVVSNLDGDWYTGTYVDSDGNRKIGSF 57
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 3.3
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +3
Query: 261 WWRGELRGNRGIFPDNFV 314
WW+ + G G+ P NF+
Sbjct: 546 WWKCSVDGKEGVVPSNFI 563
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 26.6 bits (56), Expect = 3.3
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +3
Query: 246 KIAGGWWRGELRGNRGIFPDN 308
+I GWW GE G G+F N
Sbjct: 453 EIDEGWWVGEKLGEDGVFTGN 473
>SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 26.6 bits (56), Expect = 3.3
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Frame = +3
Query: 255 GGWWRGE-LRGN-RGIFPDNFVSLLN 326
G WW G + N +GIFP NFV L+
Sbjct: 41 GKWWIGRHINTNTQGIFPSNFVHCLD 66
>SPAC13D6.02c |byr3||zinc finger protein Byr3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 179
Score = 26.2 bits (55), Expect = 4.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 59 SELKCAICGSMK*KIRDVVISVQCRQWRQIYHK 157
S + C CGS + RD + V+C +I H+
Sbjct: 114 SNMNCYACGSYGHQARDCTMGVKCYSCGKIGHR 146
>SPBC428.05c |arg12||argininosuccinate synthase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 410
Score = 26.2 bits (55), Expect = 4.4
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = -2
Query: 366 TALARPLIS**HIRLEEKRSCPGKCRGFHVTRLATSPRQSFNVAYHVPRSDRQLV 202
T+LARP+I+ I++ EK +C G + + F +AY+ + D Q++
Sbjct: 92 TSLARPIIARRQIQIAEKENCIAVSHG---CTGKGNDQVRFELAYYALKPDVQVI 143
>SPAC1F5.05c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 151
Score = 25.8 bits (54), Expect = 5.8
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Frame = -3
Query: 272 ASPPAPGNLSTSLITSPGLIVSSSASDASYAKL----TVQ-DTFCDRFVSIAGIE 123
AS AP NL S I + +SSS S AS L +VQ TF D F + ++
Sbjct: 68 ASNAAPSNLKASYIPANPRRLSSSTSSASSPPLRRLPSVQHSTFDDLFEGVGSLQ 122
>SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 25.4 bits (53), Expect = 7.7
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -1
Query: 304 SGKMPRFPRNSPRHQPPAIFQRRL 233
+ + P PR P H+PP ++ +L
Sbjct: 626 TSQSPPTPRTKPSHKPPVSYKNKL 649
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 25.4 bits (53), Expect = 7.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 178 FAYDASEADELTIRPGDVISDVERLPGAG 264
+AY A EL+I+ GD+I R G G
Sbjct: 593 YAYTAQSDMELSIQEGDIIQVTNRNAGNG 621
>SPCC162.09c |hmg1||3-hydroxy-3-methylglutaryl-CoA
reductase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1053
Score = 25.4 bits (53), Expect = 7.7
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -1
Query: 661 SNDVAFVEVQLIVVHGSISKQHPTLLLNWL 572
SND F ++Q+I V G+ +NW+
Sbjct: 825 SNDAGFDDMQVISVSGNYCTDKKPAAINWI 854
>SPAC3F10.05c |mug113||DUF1766 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 326
Score = 25.4 bits (53), Expect = 7.7
Identities = 9/23 (39%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
Frame = -1
Query: 580 NWLRWE--RWSEFEGCRMRWVEH 518
NWL+ + +W + G +RWVE+
Sbjct: 298 NWLQIDSKQWDQIRGVILRWVEY 320
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,545,695
Number of Sequences: 5004
Number of extensions: 47686
Number of successful extensions: 141
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 141
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 315915086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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