Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021113
(685 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50893| Best HMM Match : SH3_1 (HMM E-Value=2e-33) 39 0.004
SB_5212| Best HMM Match : SH3_1 (HMM E-Value=4.9e-20) 38 0.010
SB_58222| Best HMM Match : HS1_rep (HMM E-Value=0) 36 0.023
SB_20181| Best HMM Match : RhoGEF (HMM E-Value=0.038) 36 0.031
SB_42788| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.040
SB_55426| Best HMM Match : SH3_1 (HMM E-Value=1.90002e-41) 35 0.071
SB_39120| Best HMM Match : SH3_1 (HMM E-Value=2e-20) 34 0.12
SB_43686| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_10210| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_51657| Best HMM Match : SH3_1 (HMM E-Value=2.69999e-40) 31 0.87
SB_16207| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.87
SB_50533| Best HMM Match : SH3_2 (HMM E-Value=2.3e-05) 31 1.1
SB_9279| Best HMM Match : Piwi (HMM E-Value=0) 31 1.1
SB_37165| Best HMM Match : SH3_1 (HMM E-Value=0) 31 1.1
SB_40386| Best HMM Match : BAR (HMM E-Value=0) 30 1.5
SB_54836| Best HMM Match : Chlam_PMP (HMM E-Value=7.9e-08) 30 2.0
SB_49681| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_18821| Best HMM Match : SH3_1 (HMM E-Value=5.7e-16) 29 2.7
SB_10886| Best HMM Match : SH3_1 (HMM E-Value=2.8e-19) 29 2.7
SB_43644| Best HMM Match : SH3_1 (HMM E-Value=0) 29 3.5
SB_8979| Best HMM Match : SH3_1 (HMM E-Value=3.6e-05) 29 3.5
SB_39694| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 29 4.6
SB_9732| Best HMM Match : SH3_1 (HMM E-Value=2e-17) 29 4.6
SB_58990| Best HMM Match : SH3_1 (HMM E-Value=1.7e-14) 29 4.6
SB_51507| Best HMM Match : SH2 (HMM E-Value=2.3e-22) 29 4.6
SB_34642| Best HMM Match : SH3_1 (HMM E-Value=1.7e-14) 29 4.6
SB_25673| Best HMM Match : MFS_1 (HMM E-Value=0.18) 29 4.6
SB_7592| Best HMM Match : PI-PLC-Y (HMM E-Value=1.1e-33) 29 4.6
SB_5826| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_56656| Best HMM Match : VWA (HMM E-Value=3.8e-26) 28 6.1
SB_20707| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_10902| Best HMM Match : SH3_1 (HMM E-Value=0) 28 8.1
SB_3970| Best HMM Match : Drf_FH1 (HMM E-Value=1.2) 28 8.1
SB_42698| Best HMM Match : SH3_1 (HMM E-Value=5.2e-16) 28 8.1
>SB_50893| Best HMM Match : SH3_1 (HMM E-Value=2e-33)
Length = 665
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +3
Query: 258 GWWRGELRGNRGIFPDNFVSLLNE 329
GW GEL G G+FPDNFV +L E
Sbjct: 253 GWMEGELDGKTGLFPDNFVEILPE 276
Score = 37.9 bits (84), Expect = 0.008
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 246 KIAGGWWRGELRGNRGIFPDNFVSL 320
++ GWW G + G +G+FP NFV L
Sbjct: 35 EVEDGWWEGTVDGRKGVFPSNFVKL 59
Score = 32.7 bits (71), Expect = 0.28
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 587 QCRVLFTYAAVNDDELNLNEGDIVTVISK 673
+ +V + Y N+DEL L GDI+T++ K
Sbjct: 218 RAKVTYDYEQQNEDELELKVGDIITIVKK 246
>SB_5212| Best HMM Match : SH3_1 (HMM E-Value=4.9e-20)
Length = 300
Score = 37.5 bits (83), Expect = 0.010
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 255 GGWWRGELRGNRGIFPDNFVSLLNE 329
G WW+GEL G G+FP N+V L +
Sbjct: 266 GEWWKGELNGQVGMFPSNYVQSLGD 290
>SB_58222| Best HMM Match : HS1_rep (HMM E-Value=0)
Length = 727
Score = 36.3 bits (80), Expect = 0.023
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 246 KIAGGWWRGELRGNRGIFPDNFV 314
KI GWW G G RG+FP N+V
Sbjct: 701 KIDDGWWMGTCNGQRGLFPANYV 723
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/40 (30%), Positives = 26/40 (65%)
Frame = +1
Query: 133 AMETNLSQKVSCTVNFAYDASEADELTIRPGDVISDVERL 252
A++ + +Q++ + + A E DE+T P D+I+D+E++
Sbjct: 664 ALDCHSTQRLLLILTLSLPAGE-DEITFDPDDIITDIEKI 702
>SB_20181| Best HMM Match : RhoGEF (HMM E-Value=0.038)
Length = 274
Score = 35.9 bits (79), Expect = 0.031
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 249 IAGGWWRGELRGNRGIFPDNFV 314
+ GGWW G L G G FP N+V
Sbjct: 2 VDGGWWEGTLNGKNGWFPSNYV 23
>SB_42788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 35.5 bits (78), Expect = 0.040
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 587 QCRVLFTYAAVNDDELNLNEGDIVTVISKV 676
QC+ ++ Y A DEL ++ GDI+TV +++
Sbjct: 564 QCKAIYDYQATQSDELTIHPGDIITVTARL 593
Score = 35.1 bits (77), Expect = 0.053
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 166 CTVNFAYDASEADELTIRPGDVISDVERL 252
C + Y A+++DELTI PGD+I+ RL
Sbjct: 565 CKAIYDYQATQSDELTIHPGDIITVTARL 593
Score = 33.5 bits (73), Expect = 0.16
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 246 KIAGGWWRGELRGNRGIFPDNFV 314
++ GWW+G+L +GIFP ++V
Sbjct: 592 RLDNGWWQGDLNNQQGIFPASYV 614
>SB_55426| Best HMM Match : SH3_1 (HMM E-Value=1.90002e-41)
Length = 689
Score = 34.7 bits (76), Expect = 0.071
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 246 KIAGGWWRGELRGNRGIFPDNFV 314
K G WW G LR N G+FP N+V
Sbjct: 208 KDEGEWWEGRLRENYGLFPANYV 230
Score = 32.7 bits (71), Expect = 0.28
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 261 WWRGELRGNRGIFPDNFVSLLNEYATT 341
WW GEL G +G FP +V L + T
Sbjct: 169 WWSGELNGKKGWFPKTYVKLTSTAVKT 195
Score = 31.5 bits (68), Expect = 0.66
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 584 EQCRVLFTYAAVNDDELNLNEGDIVTV 664
E RVL+ + N DE+ +NE DIVTV
Sbjct: 14 EYYRVLYAFEPRNPDEIEVNEDDIVTV 40
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 258 GWWRGELRGNRGIFPDNFVSLLNE 329
GW RG+ G G+FP N+ ++E
Sbjct: 50 GWLRGKCHGKTGLFPANYAEKISE 73
>SB_39120| Best HMM Match : SH3_1 (HMM E-Value=2e-20)
Length = 524
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +1
Query: 157 KVSCTVNFAYDASEADELTIRPGDVIS 237
K V + Y+A+ ADELTI PGDVI+
Sbjct: 309 KKQVLVMYPYEANRADELTITPGDVIT 335
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 581 KEQCRVLFTYAAVNDDELNLNEGDIVTVI 667
K+Q V++ Y A DEL + GD++TV+
Sbjct: 309 KKQVLVMYPYEANRADELTITPGDVITVL 337
>SB_43686| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 379
Score = 32.7 bits (71), Expect = 0.28
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = -3
Query: 299 ENAAVST*LASPPAPGNLSTSLITSPGLIVSSSASDASYAKLTVQDTFCD 150
+N +V + LASP G S S + SPGL + S S+ S++ DTF +
Sbjct: 4 DNGSVGSPLASPGFNGTTSESPLASPGLNGTGSDSETSWS-FDTSDTFSE 52
>SB_10210| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 793
Score = 31.5 bits (68), Expect = 0.66
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 593 RVLFTYAAVNDDELNLNEGDIVTV 664
R L+ Y A++D+EL+ NEGD + V
Sbjct: 565 RALYDYEAMSDEELSFNEGDTIYV 588
>SB_51657| Best HMM Match : SH3_1 (HMM E-Value=2.69999e-40)
Length = 313
Score = 31.1 bits (67), Expect = 0.87
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 261 WWRGELRGNRGIFPDNFVSL 320
W +G L GN GIFP ++V L
Sbjct: 221 WLKGSLNGNTGIFPSSYVEL 240
>SB_16207| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 163
Score = 31.1 bits (67), Expect = 0.87
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = -2
Query: 258 PRQSFNVAYHVPRSDR--QLVRF*CIIREVNGARHFL**ICLHCR 130
PR+ N Y V RS++ QLV++ C+ VNG + +C +CR
Sbjct: 87 PRKCTNDTYSVTRSEKESQLVKWFCMGYYVNGLKAVAKRVCSYCR 131
>SB_50533| Best HMM Match : SH3_2 (HMM E-Value=2.3e-05)
Length = 156
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 578 VKEQCRVLFTYAAVNDDELNLNEGDIVT 661
V + RV+ + + DDEL+LN GDI+T
Sbjct: 4 VPVEARVITDHKTLMDDELDLNAGDIIT 31
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +3
Query: 261 WWRGELRGNRGIFPDNFVSLLNEYATTRSTGV--QGRCR 371
+W G L+G RG FP + V ++ + T V QGR +
Sbjct: 42 YWMGTLKGKRGFFPKDCVEVIKQGKTKGCVEVIKQGRTK 80
>SB_9279| Best HMM Match : Piwi (HMM E-Value=0)
Length = 941
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 578 VKEQCRVLFTYAAVNDDELNLNEGDIVTVISK 673
V E+ R + Y A + E+ L EG++VTVI K
Sbjct: 811 VVERYRAVARYMASSSGEMTLGEGEVVTVIEK 842
>SB_37165| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 1034
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/30 (36%), Positives = 22/30 (73%)
Frame = +2
Query: 587 QCRVLFTYAAVNDDELNLNEGDIVTVISKV 676
+ R L+ ++A++ +L L+EGD++TV+ V
Sbjct: 358 KARALYHFSALHSGDLELSEGDVITVLKIV 387
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 246 KIAGGWWRGELRGNRGIFPDNFV 314
+I W RG++ G GIFP FV
Sbjct: 155 EIGNNWLRGDINGTIGIFPCVFV 177
>SB_40386| Best HMM Match : BAR (HMM E-Value=0)
Length = 369
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 578 VKEQCRVLFTYAAVNDDELNLNEGDIVTVISK 673
+K C+ F Y A + EL+ EG I+T+ K
Sbjct: 303 LKPSCKAKFDYKAKKEGELSFTEGQIITLSGK 334
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +3
Query: 261 WWRGELRGNRGIFPDNFVSLLNEYATTRST 350
W+ G L G GIFP V +L + +T
Sbjct: 339 WYEGTLDGKFGIFPSALVQILTDLPAEEAT 368
>SB_54836| Best HMM Match : Chlam_PMP (HMM E-Value=7.9e-08)
Length = 598
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 265 GEASYVETAAFSRTTSFLF*TNMLLRDQRACKGGVGLCTA 384
G ++ T +SR F+F TN L A + G GLC A
Sbjct: 287 GAGVFIATGGYSRDNEFIF-TNAALHRNWASQAGGGLCIA 325
>SB_49681| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 210
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -1
Query: 361 PCTPVDLVVAYSFRRETKLSGKMPRFPRNSPRHQPPAI 248
PC P L A +F R+ L+GK P R+Q PA+
Sbjct: 44 PCPPKALPEAATFTRKDPLAGKQPSICGIPTRYQLPAL 81
>SB_18821| Best HMM Match : SH3_1 (HMM E-Value=5.7e-16)
Length = 299
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 599 LFTYAAVNDDELNLNEGDIVTVISK 673
L+ Y A DDEL+ G+IVT +S+
Sbjct: 249 LYDYEAAEDDELSFKAGEIVTKLSE 273
>SB_10886| Best HMM Match : SH3_1 (HMM E-Value=2.8e-19)
Length = 152
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 246 KIAGGWWRGELRGNRGIFPDNFVSL 320
+I W GE+ G GIFP N+V L
Sbjct: 16 QIDRNWIEGEVNGRIGIFPTNYVEL 40
>SB_43644| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 704
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +3
Query: 246 KIAGGWWRGELRGNRGIFPDNFVSLLNEYATTRST 350
K GWW G++ GN G P +++ + ++T
Sbjct: 230 KNPNGWWYGKIDGNEGWIPSSYLGKREKSVKKKAT 264
>SB_8979| Best HMM Match : SH3_1 (HMM E-Value=3.6e-05)
Length = 169
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 584 EQCRVLFTYAAVNDDELNLNEGDIVTVISK 673
E+ + ++ Y+ N+DEL L EG+ V V+ K
Sbjct: 57 ERFKAMYGYSPQNEDELPLEEGEEVFVLEK 86
>SB_39694| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 893
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/72 (22%), Positives = 33/72 (45%)
Frame = +1
Query: 136 METNLSQKVSCTVNFAYDASEADELTIRPGDVISDVERLPGAGGEASYVETAAFSRTTSF 315
++ LS+ C + Y+A+E DEL+ + + I + + P G+ + +
Sbjct: 12 LQAILSRSDLCIALYDYEAAEEDELSFKANECIELLSKDPEISGDEDWWVGRVDGQEKIG 71
Query: 316 LF*TNMLLRDQR 351
LF N + ++R
Sbjct: 72 LFPANYVTNEKR 83
>SB_9732| Best HMM Match : SH3_1 (HMM E-Value=2e-17)
Length = 1860
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 587 QCRVLFTYAAVNDDELNLNEGDIVTVISKV 676
Q + + Y DEL L+EGD++ V+ K+
Sbjct: 935 QVQAIHNYTPQQPDELALHEGDVINVLRKL 964
>SB_58990| Best HMM Match : SH3_1 (HMM E-Value=1.7e-14)
Length = 167
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +3
Query: 261 WWRGELRGNRGIFPDNFVSLLNEYATTRSTGVQGRCR 371
W++ E+ GN G+ P N++ L G +G R
Sbjct: 36 WYQAEMDGNSGMIPANYIELKPHERAACMCGTRGGLR 72
>SB_51507| Best HMM Match : SH2 (HMM E-Value=2.3e-22)
Length = 192
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 581 KEQCRVLFTYAAVNDDELNLNEGDIVTVISK 673
K CR L+ Y +ND E+ G +T + K
Sbjct: 128 KPACRALWDYEGINDQEMTFCRGAFITNVVK 158
>SB_34642| Best HMM Match : SH3_1 (HMM E-Value=1.7e-14)
Length = 237
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 587 QCRVLFTYAAVNDDELNLNEGDIV 658
Q V++ Y A +DDE+++ EGDI+
Sbjct: 181 QYLVMYDYNAADDDEVSMVEGDII 204
>SB_25673| Best HMM Match : MFS_1 (HMM E-Value=0.18)
Length = 634
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = -1
Query: 376 RARHRPCTPVDLVVAYSFRRETKLSGKMPRFPRNSPRHQPPAIFQRRLSRPPV*SSARPL 197
R + P+DL AY R +LSG+ P + +P + I +R +PP+ + P
Sbjct: 143 RGKRTKNPPIDLGPAYFHIRGKRLSGEQPPYLDLTPAYF--HIRGKRTQQPPMIDLSEPA 200
Query: 196 LMH 188
H
Sbjct: 201 FFH 203
>SB_7592| Best HMM Match : PI-PLC-Y (HMM E-Value=1.1e-33)
Length = 997
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 581 KEQCRVLFTYAAVNDDELNLNEGDIVTVISK 673
K CR L+ Y +ND E+ G +T + K
Sbjct: 223 KPACRALWDYEGINDQEMTFCRGAFITNVVK 253
>SB_5826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 402
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 246 KIAGGWWRGELRGNRGIFPDNFVSL 320
K+ W G+L GIFP NFV L
Sbjct: 267 KVDENWCEGKLNNKCGIFPINFVEL 291
>SB_56656| Best HMM Match : VWA (HMM E-Value=3.8e-26)
Length = 2157
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +2
Query: 599 LFTYAAVNDDELNLNEGDIVTVISKVSP 682
L+ + A +D++ ++GD+VTV++K P
Sbjct: 1896 LWDFNATAEDDITASKGDVVTVLNKDDP 1923
>SB_20707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 581 KEQCRVLFTYAAVNDDELNLNEGDIVT 661
+E+ + Y A + DE+ L EGDI+T
Sbjct: 356 EERYVAAYNYTASDTDEIGLQEGDIIT 382
>SB_10902| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 824
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 602 FTYAAVNDDELNLNEGDIVTVISK 673
F+Y ++ DEL L +GD++ V+ K
Sbjct: 211 FSYQPIHVDELQLTKGDLIHVLEK 234
>SB_3970| Best HMM Match : Drf_FH1 (HMM E-Value=1.2)
Length = 558
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 266 PPAPGNLSTSLITSPGLIVSSSASDAS 186
PP P N+S S++TS GL V SD S
Sbjct: 110 PPTPSNMS-SIVTSIGLGVKDGLSDLS 135
>SB_42698| Best HMM Match : SH3_1 (HMM E-Value=5.2e-16)
Length = 505
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +2
Query: 581 KEQCRVLFTYAAVNDDELNLNEGDIVTVISK 673
+ + + L + +DDEL + DI+T+IS+
Sbjct: 119 RRRAKALLDFERHDDDELGFRKNDIITIISQ 149
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,375,337
Number of Sequences: 59808
Number of extensions: 406558
Number of successful extensions: 1048
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1769412099
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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