Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021113
(685 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical ... 41 0.001
AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical... 36 0.020
U29082-8|AAA68405.1| 228|Caenorhabditis elegans Sex muscle abno... 35 0.062
S88446-1|AAB21850.1| 228|Caenorhabditis elegans sem-5 protein. 35 0.062
Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical pr... 33 0.14
U52515-1|AAA97925.1| 1036|Caenorhabditis elegans hum-1 protein. 33 0.14
AF039047-15|AAM15588.1| 1040|Caenorhabditis elegans Human mlk (m... 33 0.19
AF039047-14|AAM15589.1| 978|Caenorhabditis elegans Human mlk (m... 33 0.19
U32305-1|AAK18854.2| 469|Caenorhabditis elegans Hypothetical pr... 32 0.33
Z70211-4|CAA94159.1| 825|Caenorhabditis elegans Hypothetical pr... 31 0.58
Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical pr... 31 0.77
AL021492-14|CAA16388.2| 473|Caenorhabditis elegans Hypothetical... 31 0.77
Z99171-5|CAB16311.1| 280|Caenorhabditis elegans Hypothetical pr... 30 1.3
U39651-6|AAL11483.1| 286|Caenorhabditis elegans Temporarily ass... 30 1.8
U39651-5|AAL11482.2| 395|Caenorhabditis elegans Temporarily ass... 30 1.8
Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical pr... 29 2.3
U56860-5|AAP40524.1| 685|Caenorhabditis elegans Intermediate fi... 29 4.1
U56860-4|AAM69100.1| 1128|Caenorhabditis elegans Intermediate fi... 29 4.1
U56860-3|AAM69101.1| 1248|Caenorhabditis elegans Intermediate fi... 29 4.1
U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav (... 29 4.1
U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav (... 29 4.1
M77697-4|AAA27900.4| 493|Caenorhabditis elegans Hypothetical pr... 29 4.1
DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein. 29 4.1
L08403-3|AAT92076.1| 335|Caenorhabditis elegans Hypothetical pr... 28 5.4
AL023835-4|CAD56254.1| 564|Caenorhabditis elegans Hypothetical ... 28 5.4
AL023835-3|CAD56253.1| 566|Caenorhabditis elegans Hypothetical ... 28 5.4
AL023835-1|CAA19486.1| 164|Caenorhabditis elegans Hypothetical ... 28 5.4
U97407-8|AAN84851.1| 397|Caenorhabditis elegans Prion-like-(q/n... 28 7.1
U97407-7|AAB52480.2| 457|Caenorhabditis elegans Prion-like-(q/n... 28 7.1
Z81492-6|CAB04034.1| 416|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z68215-15|CAN86580.1| 1544|Caenorhabditis elegans Hypothetical p... 27 9.4
Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical p... 27 9.4
Z68215-6|CAB54213.2| 1304|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical pr... 27 9.4
U67954-1|AAB52605.2| 826|Caenorhabditis elegans Hypothetical pr... 27 9.4
U28732-6|AAB04903.2| 489|Caenorhabditis elegans Hypothetical pr... 27 9.4
U28732-5|AAT92075.1| 495|Caenorhabditis elegans Hypothetical pr... 27 9.4
AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily a... 27 9.4
AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical ... 27 9.4
AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical ... 27 9.4
>AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical
protein Y44E3A.4 protein.
Length = 511
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +3
Query: 258 GWWRGELRGNRGIFPDNFVSLLNEYATTRSTGVQG 362
GW+ GEL G +G+FPDNFV L+ T S G
Sbjct: 229 GWFEGELHGKKGLFPDNFVELVQVPLGTESGARHG 263
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 581 KEQCRVLFTYAAVNDDELNLNEGDIVTVIS 670
KE RV F Y +DDEL L E D++ I+
Sbjct: 192 KEMARVKFVYNPQHDDELALKEIDMLINIT 221
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Frame = +3
Query: 249 IAGGWWRGELR--GNRGIFPDNFVSL 320
+ GW +G+L+ G G+FP NFV+L
Sbjct: 79 VEDGWSKGKLKSTGAVGMFPTNFVTL 104
>AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical
protein Y116A8C.36 protein.
Length = 1097
Score = 36.3 bits (80), Expect = 0.020
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Frame = +3
Query: 234 KRR*KIAGGWWRGELRGN----RGIFPDNFVSLLNEYATTRSTGVQGRCRALYSYQPVNP 401
K R K A GWW GEL N G FP +V +L E A+ + R A+Y Y+ P
Sbjct: 999 KIREKSAAGWWEGELIRNGKPIAGWFPGEYVKVLEEAASPAT-----RATAVYDYEASQP 1053
Score = 32.7 bits (71), Expect = 0.25
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 261 WWRGELRGNRGIFPDNFVSL 320
WW+G G GIFP N+V +
Sbjct: 930 WWKGRCNGREGIFPANYVEI 949
Score = 32.3 bits (70), Expect = 0.33
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 145 NLSQKVSCTVNFAYDASEADELTIRPGDVI 234
N+ C FA++A DEL+ PGDVI
Sbjct: 671 NIHDTYKCRALFAFEARSEDELSFEPGDVI 700
Score = 31.1 bits (67), Expect = 0.77
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +2
Query: 587 QCRVLFTYAAVNDDELNLNEGDIVTV 664
+CR LF + A ++DEL+ GD++ V
Sbjct: 677 KCRALFAFEARSEDELSFEPGDVIIV 702
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 136 METNLSQKVSCTVNFAYDASEADELTIRPGDVI 234
+E S T + Y+AS+ DEL + GDVI
Sbjct: 1032 LEEAASPATRATAVYDYEASQPDELGFKTGDVI 1064
>U29082-8|AAA68405.1| 228|Caenorhabditis elegans Sex muscle
abnormal protein 5 protein.
Length = 228
Score = 34.7 bits (76), Expect = 0.062
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 261 WWRGELRGNRGIFPDNFVSLLN 326
WW G+L RGIFP N+V N
Sbjct: 191 WWEGQLNNRRGIFPSNYVCPYN 212
Score = 28.3 bits (60), Expect = 5.4
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 261 WWRGELRGNRGIFPDNFVSL 320
W++ EL GN G P N++ +
Sbjct: 36 WYKAELDGNEGFIPSNYIRM 55
>S88446-1|AAB21850.1| 228|Caenorhabditis elegans sem-5 protein.
Length = 228
Score = 34.7 bits (76), Expect = 0.062
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 261 WWRGELRGNRGIFPDNFVSLLN 326
WW G+L RGIFP N+V N
Sbjct: 191 WWEGQLNNRRGIFPSNYVCPYN 212
Score = 28.3 bits (60), Expect = 5.4
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 261 WWRGELRGNRGIFPDNFVSL 320
W++ EL GN G P N++ +
Sbjct: 36 WYKAELDGNEGFIPSNYIRM 55
>Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical protein
F29D10.4 protein.
Length = 1100
Score = 33.5 bits (73), Expect = 0.14
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 246 KIAGGWWRGELRGNRGIFPDNFV 314
K A GWW+G++ G+FP N+V
Sbjct: 1076 KDASGWWQGKVNNRVGLFPGNYV 1098
>U52515-1|AAA97925.1| 1036|Caenorhabditis elegans hum-1 protein.
Length = 1036
Score = 33.5 bits (73), Expect = 0.14
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 246 KIAGGWWRGELRGNRGIFPDNFV 314
K A GWW+G++ G+FP N+V
Sbjct: 1012 KDASGWWQGKVNNRVGLFPGNYV 1034
>AF039047-15|AAM15588.1| 1040|Caenorhabditis elegans Human mlk
(mixed lineage kinase)homolog protein 1, isoform a
protein.
Length = 1040
Score = 33.1 bits (72), Expect = 0.19
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 258 GWWRGELRGNRGIFPDNF 311
GW+RGEL G G+FP N+
Sbjct: 107 GWYRGELNGKVGLFPSNY 124
>AF039047-14|AAM15589.1| 978|Caenorhabditis elegans Human mlk
(mixed lineage kinase)homolog protein 1, isoform b
protein.
Length = 978
Score = 33.1 bits (72), Expect = 0.19
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 258 GWWRGELRGNRGIFPDNF 311
GW+RGEL G G+FP N+
Sbjct: 107 GWYRGELNGKVGLFPSNY 124
>U32305-1|AAK18854.2| 469|Caenorhabditis elegans Hypothetical
protein B0336.6 protein.
Length = 469
Score = 32.3 bits (70), Expect = 0.33
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 584 EQCRVLFTYAAVNDDELNLNEGDIVTVISK 673
E+ RVL+ Y A +DEL L E IV V+ K
Sbjct: 415 EKVRVLYDYDAAKEDELTLRENAIVYVLKK 444
>Z70211-4|CAA94159.1| 825|Caenorhabditis elegans Hypothetical
protein K11E4.4 protein.
Length = 825
Score = 31.5 bits (68), Expect = 0.58
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 255 GGWWRGELRGNRGIFPDNFVSLLNE 329
GGWW G G G FP +V+L+ E
Sbjct: 220 GGWWEGTHEGVTGWFPCAYVTLITE 244
>Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical
protein K08E3.4 protein.
Length = 643
Score = 31.1 bits (67), Expect = 0.77
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +3
Query: 246 KIAGGWWRGELRGNR-GIFPDNFVSLL 323
++ GWW+G R G+FP N+V L+
Sbjct: 617 QVDSGWWKGRAPSGRVGLFPANYVKLI 643
>AL021492-14|CAA16388.2| 473|Caenorhabditis elegans Hypothetical
protein Y45F10D.13a protein.
Length = 473
Score = 31.1 bits (67), Expect = 0.77
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 246 KIAGGWWRGELRGNRGIFPDNFVSLLNEYATTRSTGVQGRCRALYSY 386
++ G W GE G GIFP ++V + T + G + RA+Y +
Sbjct: 183 EVDGYWMEGERNGRSGIFPTSYVQI-----NTGNQGDSQKMRAIYPF 224
>Z99171-5|CAB16311.1| 280|Caenorhabditis elegans Hypothetical
protein F47G4.5 protein.
Length = 280
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -2
Query: 492 PRDPGVDLATSPPLPLLELKARR 424
PR P VDL TSPP+P + ++ RR
Sbjct: 67 PRSPSVDLPTSPPIPSV-IRQRR 88
>U39651-6|AAL11483.1| 286|Caenorhabditis elegans Temporarily
assigned gene nameprotein 22, isoform b protein.
Length = 286
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +3
Query: 246 KIAGGWWRGEL-RGNRGIFPDNFVSLLNEYATTRSTGVQGR 365
K GWW+GE G G FP N+V + ++ R
Sbjct: 34 KSTDGWWKGEAPNGGVGWFPSNYVEEVEASTNGNQGSIENR 74
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 581 KEQCRVLFTYAAVNDDELNLNEGDIVTVISK 673
K + V FTY +DEL L +GD V V+ K
Sbjct: 4 KTKAVVKFTYEPRLEDELGLTKGDFVYVVEK 34
>U39651-5|AAL11482.2| 395|Caenorhabditis elegans Temporarily
assigned gene nameprotein 22, isoform a protein.
Length = 395
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +3
Query: 246 KIAGGWWRGEL-RGNRGIFPDNFVSLLNEYATTRSTGVQGR 365
K GWW+GE G G FP N+V + ++ R
Sbjct: 146 KSTDGWWKGEAPNGGVGWFPSNYVEEVEASTNGNQGSIENR 186
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 581 KEQCRVLFTYAAVNDDELNLNEGDIVTVISK 673
K + V FTY +DEL L +GD V V+ K
Sbjct: 116 KTKAVVKFTYEPRLEDELGLTKGDFVYVVEK 146
>Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical
protein F58G6.1 protein.
Length = 461
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/19 (63%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
Frame = +3
Query: 258 GWWRGELR-GNRGIFPDNF 311
GW GEL G RG+FP+NF
Sbjct: 439 GWRLGELEDGKRGVFPENF 457
>U56860-5|AAP40524.1| 685|Caenorhabditis elegans Intermediate
filament, c protein2, isoform c protein.
Length = 685
Score = 28.7 bits (61), Expect = 4.1
Identities = 23/75 (30%), Positives = 36/75 (48%)
Frame = -1
Query: 355 TPVDLVVAYSFRRETKLSGKMPRFPRNSPRHQPPAIFQRRLSRPPV*SSARPLLMHHTRS 176
+P+D+V R ETK+ G RF + + + + + P SA+ ++ H RS
Sbjct: 337 SPIDVVKNVIDRWETKIGGTTTRFYASDQQLRSVSRVDMNDNVP---RSAQEKIIVHQRS 393
Query: 175 *RCKTLFVIDLSPLP 131
T VI +SPLP
Sbjct: 394 ESQPTERVIPISPLP 408
>U56860-4|AAM69100.1| 1128|Caenorhabditis elegans Intermediate
filament, c protein2, isoform a protein.
Length = 1128
Score = 28.7 bits (61), Expect = 4.1
Identities = 23/75 (30%), Positives = 36/75 (48%)
Frame = -1
Query: 355 TPVDLVVAYSFRRETKLSGKMPRFPRNSPRHQPPAIFQRRLSRPPV*SSARPLLMHHTRS 176
+P+D+V R ETK+ G RF + + + + + P SA+ ++ H RS
Sbjct: 337 SPIDVVKNVIDRWETKIGGTTTRFYASDQQLRSVSRVDMNDNVP---RSAQEKIIVHQRS 393
Query: 175 *RCKTLFVIDLSPLP 131
T VI +SPLP
Sbjct: 394 ESQPTERVIPISPLP 408
>U56860-3|AAM69101.1| 1248|Caenorhabditis elegans Intermediate
filament, c protein2, isoform b protein.
Length = 1248
Score = 28.7 bits (61), Expect = 4.1
Identities = 23/75 (30%), Positives = 36/75 (48%)
Frame = -1
Query: 355 TPVDLVVAYSFRRETKLSGKMPRFPRNSPRHQPPAIFQRRLSRPPV*SSARPLLMHHTRS 176
+P+D+V R ETK+ G RF + + + + + P SA+ ++ H RS
Sbjct: 337 SPIDVVKNVIDRWETKIGGTTTRFYASDQQLRSVSRVDMNDNVP---RSAQEKIIVHQRS 393
Query: 175 *RCKTLFVIDLSPLP 131
T VI +SPLP
Sbjct: 394 ESQPTERVIPISPLP 408
>U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform a protein.
Length = 975
Score = 28.7 bits (61), Expect = 4.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +3
Query: 258 GWWRGELRGNRGIFPDNFV 314
GWW+G++ G FP ++V
Sbjct: 936 GWWKGQVNNKSGFFPLSYV 954
>U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform b protein.
Length = 1007
Score = 28.7 bits (61), Expect = 4.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +3
Query: 258 GWWRGELRGNRGIFPDNFV 314
GWW+G++ G FP ++V
Sbjct: 968 GWWKGQVNNKSGFFPLSYV 986
>M77697-4|AAA27900.4| 493|Caenorhabditis elegans Hypothetical
protein B0303.7 protein.
Length = 493
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 145 NLSQKVSCTVNFAYDASEADELTIRPGDVISDVE 246
N K + TV++ YD+ A +L + GDVI+ +E
Sbjct: 353 NSGPKQTVTVSYDYDSGVASDLRLFEGDVITALE 386
>DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein.
Length = 1007
Score = 28.7 bits (61), Expect = 4.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +3
Query: 258 GWWRGELRGNRGIFPDNFV 314
GWW+G++ G FP ++V
Sbjct: 968 GWWKGQVNNKSGFFPLSYV 986
>L08403-3|AAT92076.1| 335|Caenorhabditis elegans Hypothetical
protein F42H10.3 protein.
Length = 335
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 593 RVLFTYAAVNDDELNLNEGDIVTVISKV 676
+ ++ YAA + DE++ EGDI+ K+
Sbjct: 272 KAIYDYAAADKDEISFLEGDIIVNCEKI 299
>AL023835-4|CAD56254.1| 564|Caenorhabditis elegans Hypothetical
protein Y37A1B.2d protein.
Length = 564
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +3
Query: 240 R*KIAGGWWRGE-LRGNRGIFPDNFVS 317
R I GGW G +RG+ G+FP+++V+
Sbjct: 31 RENIDGGWIEGRNVRGSVGLFPESYVT 57
>AL023835-3|CAD56253.1| 566|Caenorhabditis elegans Hypothetical
protein Y37A1B.2c protein.
Length = 566
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +3
Query: 240 R*KIAGGWWRGE-LRGNRGIFPDNFVS 317
R I GGW G +RG+ G+FP+++V+
Sbjct: 31 RENIDGGWIEGRNVRGSVGLFPESYVT 57
>AL023835-1|CAA19486.1| 164|Caenorhabditis elegans Hypothetical
protein Y37A1B.2a protein.
Length = 164
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +3
Query: 240 R*KIAGGWWRGE-LRGNRGIFPDNFVS 317
R I GGW G +RG+ G+FP+++V+
Sbjct: 31 RENIDGGWIEGRNVRGSVGLFPESYVT 57
>U97407-8|AAN84851.1| 397|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 19,
isoform b protein.
Length = 397
Score = 27.9 bits (59), Expect = 7.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +3
Query: 261 WWRGELRGNRGIFPDNFVS 317
WW G + +G+FP +FV+
Sbjct: 248 WWTGRIGTQQGLFPSSFVT 266
>U97407-7|AAB52480.2| 457|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 19,
isoform a protein.
Length = 457
Score = 27.9 bits (59), Expect = 7.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +3
Query: 261 WWRGELRGNRGIFPDNFVS 317
WW G + +G+FP +FV+
Sbjct: 256 WWTGRIGTQQGLFPSSFVT 274
>Z81492-6|CAB04034.1| 416|Caenorhabditis elegans Hypothetical
protein E03H4.10 protein.
Length = 416
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -3
Query: 344 SRSSIFV*KRNEVVRENAAVST*LASPPA-PGNLSTSLITSPGLIVS 207
+R + ++ KR V+ A +A PA P N + L+ SPG+I S
Sbjct: 272 TRPAKYICKRPAGVQSTTASPVTVAPSPANPSNCNAGLLMSPGVITS 318
>Z68215-15|CAN86580.1| 1544|Caenorhabditis elegans Hypothetical
protein C53B4.4e protein.
Length = 1544
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +1
Query: 142 TNLSQKVSCTVNFAYDASEADELTIRPGDVISDVERLP 255
TN + KV CTV D S AD+ +PGDV+ + +P
Sbjct: 528 TNRAVKV-CTVE---DNSLADKAAFKPGDVLVAINNVP 561
>Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical
protein C53B4.4d protein.
Length = 1301
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +1
Query: 142 TNLSQKVSCTVNFAYDASEADELTIRPGDVISDVERLP 255
TN + KV CTV D S AD+ +PGDV+ + +P
Sbjct: 357 TNRAVKV-CTVE---DNSLADKAAFKPGDVLVAINNVP 390
>Z68215-6|CAB54213.2| 1304|Caenorhabditis elegans Hypothetical
protein C53B4.4c protein.
Length = 1304
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +1
Query: 142 TNLSQKVSCTVNFAYDASEADELTIRPGDVISDVERLP 255
TN + KV CTV D S AD+ +PGDV+ + +P
Sbjct: 357 TNRAVKV-CTVE---DNSLADKAAFKPGDVLVAINNVP 390
>Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical
protein C53B4.4b protein.
Length = 1586
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +1
Query: 142 TNLSQKVSCTVNFAYDASEADELTIRPGDVISDVERLP 255
TN + KV CTV D S AD+ +PGDV+ + +P
Sbjct: 528 TNRAVKV-CTVE---DNSLADKAAFKPGDVLVAINNVP 561
>Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical
protein C53B4.4a protein.
Length = 1584
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +1
Query: 142 TNLSQKVSCTVNFAYDASEADELTIRPGDVISDVERLP 255
TN + KV CTV D S AD+ +PGDV+ + +P
Sbjct: 528 TNRAVKV-CTVE---DNSLADKAAFKPGDVLVAINNVP 561
>U67954-1|AAB52605.2| 826|Caenorhabditis elegans Hypothetical
protein F41D9.1 protein.
Length = 826
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 584 EQCRVLFTYAAVNDDELNLNEGDIVTVISK 673
++ R L +A ++EL + DIVT+IS+
Sbjct: 527 KRARALLDFAREEENELGFRKNDIVTIISE 556
>U28732-6|AAB04903.2| 489|Caenorhabditis elegans Hypothetical
protein F45E1.7a protein.
Length = 489
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 258 GWWRGELRGNRGIFPDNFVSLLNE 329
GW G + GN G+FP ++V E
Sbjct: 464 GWCTGRVSGNVGLFPASYVQCQGE 487
>U28732-5|AAT92075.1| 495|Caenorhabditis elegans Hypothetical
protein F45E1.7b protein.
Length = 495
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 258 GWWRGELRGNRGIFPDNFVSLLNE 329
GW G + GN G+FP ++V E
Sbjct: 470 GWCTGRVSGNVGLFPASYVQCQGE 493
>AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily
assigned gene nameprotein 168 protein.
Length = 1347
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 258 GWWRGELRGNRGIFPDNFV 314
G++ GEL G RG+ P NF+
Sbjct: 1203 GFYMGELNGLRGLVPSNFL 1221
>AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical
protein C36B7.5b protein.
Length = 1148
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
Frame = -1
Query: 577 WLRWERWSEFEGCRMRWVEHXNK---LDGNTPTRP 482
W RW WS GC + N+ ++G +P P
Sbjct: 701 WNRWTEWSPCIGCGNEGISKRNRVCSMEGQSPAPP 735
>AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical
protein C36B7.5a protein.
Length = 1121
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
Frame = -1
Query: 577 WLRWERWSEFEGCRMRWVEHXNK---LDGNTPTRP 482
W RW WS GC + N+ ++G +P P
Sbjct: 701 WNRWTEWSPCIGCGNEGISKRNRVCSMEGQSPAPP 735
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,656,273
Number of Sequences: 27780
Number of extensions: 290983
Number of successful extensions: 929
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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