Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021112
         (865 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor...    26   1.7  
AY341224-1|AAR13788.1|  287|Anopheles gambiae TOLL9 protein.           24   5.2  
AY341223-1|AAR13787.1|  287|Anopheles gambiae TOLL9 protein.           24   5.2  
AY341222-1|AAR13786.1|  287|Anopheles gambiae TOLL9 protein.           24   5.2  
AY341221-1|AAR13785.1|  287|Anopheles gambiae TOLL9 protein.           24   5.2  
AY341220-1|AAR13784.1|  287|Anopheles gambiae TOLL9 protein.           24   5.2  
AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.           24   5.2  
U50479-1|AAA93478.1|  151|Anopheles gambiae protein ( Anopheles ...    24   6.9  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    24   6.9  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   9.1  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    23   9.1  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    23   9.1  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    23   9.1  

>DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor 22
           protein.
          Length = 467

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 10/39 (25%), Positives = 21/39 (53%)
 Frame = -3

Query: 815 ISPRQTVTIMESSREPRRKHNHEHDNCSGCHLHQHRLRV 699
           ++P Q   + +  R   + H  E DN S  H+++ +L++
Sbjct: 18  LNPNQRQQLEDRRRIKEQLHQLEQDNESPTHMYRRKLKI 56


>AY341224-1|AAR13788.1|  287|Anopheles gambiae TOLL9 protein.
          Length = 287

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
 Frame = +1

Query: 94  LCLSERHFNFKYGV--NDYDCKSRRR 165
           LCL ER F   YG+  N   C  R R
Sbjct: 236 LCLHERDFEVGYGILENIISCMDRSR 261


>AY341223-1|AAR13787.1|  287|Anopheles gambiae TOLL9 protein.
          Length = 287

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
 Frame = +1

Query: 94  LCLSERHFNFKYGV--NDYDCKSRRR 165
           LCL ER F   YG+  N   C  R R
Sbjct: 236 LCLHERDFEVGYGILENIISCMDRSR 261


>AY341222-1|AAR13786.1|  287|Anopheles gambiae TOLL9 protein.
          Length = 287

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
 Frame = +1

Query: 94  LCLSERHFNFKYGV--NDYDCKSRRR 165
           LCL ER F   YG+  N   C  R R
Sbjct: 236 LCLHERDFEVGYGILENIISCMDRSR 261


>AY341221-1|AAR13785.1|  287|Anopheles gambiae TOLL9 protein.
          Length = 287

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
 Frame = +1

Query: 94  LCLSERHFNFKYGV--NDYDCKSRRR 165
           LCL ER F   YG+  N   C  R R
Sbjct: 236 LCLHERDFEVGYGILENIISCMDRSR 261


>AY341220-1|AAR13784.1|  287|Anopheles gambiae TOLL9 protein.
          Length = 287

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
 Frame = +1

Query: 94  LCLSERHFNFKYGV--NDYDCKSRRR 165
           LCL ER F   YG+  N   C  R R
Sbjct: 236 LCLHERDFEVGYGILENIISCMDRSR 261


>AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.
          Length = 576

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
 Frame = +1

Query: 94  LCLSERHFNFKYGV--NDYDCKSRRR 165
           LCL ER F   YG+  N   C  R R
Sbjct: 463 LCLHERDFEVGYGILENIISCMDRSR 488


>U50479-1|AAA93478.1|  151|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S13 mRNA, complete
           cds. ).
          Length = 151

 Score = 23.8 bits (49), Expect = 6.9
 Identities = 6/30 (20%), Positives = 20/30 (66%)
 Frame = +3

Query: 195 MSRARAIYSSTRIRLKCCLGIKPSVPDEMF 284
           +++ R +  +  +R+   +G+KP +P++++
Sbjct: 60  VAQVRFVNGNKVLRIMKAVGLKPDIPEDLY 89


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.8 bits (49), Expect = 6.9
 Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +3

Query: 594  IDDVLQRGAILSE-LDTKTQNLSMMSQKYRKDATYLNTKSMLVKVTA 731
            + D+  + +IL E L+    NLS++ +  +K   YL   ++L ++TA
Sbjct: 1065 LPDLQYQISILEEKLNANKPNLSVIDEFLKKREAYLMRVAVLEEITA 1111


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -3

Query: 179 QPKAARRRLLQS*S-LTPYLKLKCLSLK 99
           +PK   + LL S + L+PYL+  CLS +
Sbjct: 237 RPKMTPQSLLASQTGLSPYLRFGCLSTR 264


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 6/18 (33%), Positives = 14/18 (77%)
 Frame = -1

Query: 691 VASFRYFCDIIDRFCVFV 638
           ++ +++   ++DRFC+FV
Sbjct: 451 ISDWKFAAMVVDRFCLFV 468


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 6/18 (33%), Positives = 14/18 (77%)
 Frame = -1

Query: 691 VASFRYFCDIIDRFCVFV 638
           ++ +++   ++DRFC+FV
Sbjct: 451 ISDWKFAAMVVDRFCLFV 468


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
 Frame = +1

Query: 301 YLFHYLIENHICY--LVLCERNYSKRLAF 381
           + FH+L  +H CY  ++ C  N   R  F
Sbjct: 550 FAFHWLAMSHSCYNPIIYCYMNARFRSGF 578


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 751,950
Number of Sequences: 2352
Number of extensions: 13830
Number of successful extensions: 37
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92199573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)