Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021112
(865 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC001364-1|AAH01364.1| 215|Homo sapiens SEC22B protein protein. 110 7e-24
BC007122-1|AAH07122.1| 307|Homo sapiens SEC22 vesicle trafficki... 79 2e-14
X92396-1|CAA63133.1| 220|Homo sapiens ORF protein. 51 5e-06
BC056141-1|AAH56141.1| 220|Homo sapiens synaptobrevin-like 1 pr... 51 5e-06
AK222794-1|BAD96514.1| 220|Homo sapiens synaptobrevin-like 1 va... 51 5e-06
AJ295938-1|CAC16891.1| 260|Homo sapiens synaptobrevin like prot... 51 5e-06
AJ271736-1|CAB96816.1| 220|Homo sapiens synaptobrevin-like 1 pr... 51 5e-06
BC018437-1|AAH18437.1| 250|Homo sapiens SEC22 vesicle trafficki... 42 0.003
BC006178-1|AAH06178.1| 303|Homo sapiens SEC22 vesicle trafficki... 42 0.003
AY359041-1|AAQ89400.1| 228|Homo sapiens SEC22C protein. 42 0.003
AF039568-1|AAD02171.1| 250|Homo sapiens vesicle trafficking pro... 42 0.003
Z98751-4|CAM28272.1| 140|Homo sapiens vesicle-associated membra... 38 0.036
Z98751-3|CAI21808.1| 141|Homo sapiens vesicle-associated membra... 38 0.036
Z48924-1|CAA88760.1| 118|Homo sapiens Vamp1 protein. 38 0.036
CR457011-1|CAG33292.1| 141|Homo sapiens VAMP4 protein. 38 0.036
BC031264-1|AAH31264.1| 141|Homo sapiens VAMP4 protein protein. 38 0.036
BC007019-1|AAH07019.1| 140|Homo sapiens vesicle-associated memb... 38 0.036
BC005974-1|AAH05974.1| 141|Homo sapiens VAMP4 protein protein. 38 0.036
AL035296-1|CAA22896.1| 141|Homo sapiens hypothetical protein pr... 38 0.036
AF044310-1|AAC24032.1| 141|Homo sapiens VAMP 4 protein. 38 0.062
M36205-1|AAA60604.1| 116|Homo sapiens SYB2 protein. 37 0.11
CR456995-1|CAG33276.1| 100|Homo sapiens VAMP5 protein. 37 0.11
BC033870-1|AAH33870.1| 116|Homo sapiens vesicle-associated memb... 37 0.11
BC019608-1|AAH19608.1| 116|Homo sapiens vesicle-associated memb... 37 0.11
BC002737-1|AAH02737.3| 116|Homo sapiens vesicle-associated memb... 37 0.11
AJ225044-1|CAA12385.1| 116|Homo sapiens vesicle associated memb... 37 0.11
AF135372-1|AAF15551.1| 116|Homo sapiens synaptobrevin 2 protein. 37 0.11
M36200-1|AAA60603.1| 118|Homo sapiens SYB1 protein. 36 0.14
BC023286-1|AAH23286.1| 117|Homo sapiens vesicle-associated memb... 36 0.19
AJ549301-1|CAD70593.2| 179|Homo sapiens tetanus insensitive VAM... 36 0.19
Z98884-2|CAB63146.1| 100|Homo sapiens vesicle-associated membra... 36 0.25
U64520-1|AAB05814.1| 100|Homo sapiens synaptobrevin-3 protein. 36 0.25
CR542231-1|CAG47027.1| 116|Homo sapiens VAMP1 protein. 36 0.25
CR542214-1|CAG47010.1| 116|Homo sapiens VAMP1 protein. 36 0.25
CR542154-1|CAG46951.1| 100|Homo sapiens VAMP3 protein. 36 0.25
CR542145-1|CAG46942.1| 100|Homo sapiens VAMP3 protein. 36 0.25
BT007327-1|AAP35991.1| 100|Homo sapiens vesicle-associated memb... 36 0.25
BT006700-1|AAP35346.1| 100|Homo sapiens vesicle-associated memb... 36 0.25
BC007050-1|AAH07050.1| 100|Homo sapiens vesicle-associated memb... 36 0.25
BC005941-1|AAH05941.1| 100|Homo sapiens vesicle-associated memb... 36 0.25
BC003570-1|AAH03570.1| 100|Homo sapiens vesicle-associated memb... 36 0.25
BC001634-1|AAH01634.1| 100|Homo sapiens vesicle-associated memb... 36 0.25
AF060538-1|AAC28336.1| 116|Homo sapiens vesicle associated memb... 36 0.25
AF053233-1|AAC08434.1| 100|Homo sapiens endobrevin protein. 36 0.25
AC016753-3|AAY24341.1| 100|Homo sapiens unknown protein. 36 0.25
X76785-2|CAA54180.1| 342|Homo sapiens hypothetical protein prot... 34 0.77
U30883-1|AAA93073.1| 344|Homo sapiens SRp55-1 protein. 31 5.4
U30829-1|AAA93072.1| 335|Homo sapiens SRp55-3 protein. 31 5.4
U30828-1|AAA93071.1| 135|Homo sapiens SRp55-2 protein. 31 5.4
BC006832-1|AAH06832.1| 344|Homo sapiens splicing factor, argini... 31 5.4
AL031681-3|CAB43960.1| 344|Homo sapiens splicing factor, argini... 31 5.4
AB208976-1|BAD92213.1| 279|Homo sapiens arginine/serine-rich sp... 31 5.4
>BC001364-1|AAH01364.1| 215|Homo sapiens SEC22B protein protein.
Length = 215
Score = 110 bits (264), Expect = 7e-24
Identities = 46/84 (54%), Positives = 65/84 (77%)
Frame = +1
Query: 253 ELSPQSPMRCSIETGPYLFHYLIENHICYLVLCERNYSKRLAFNYLEEIAQEFFQQYGHR 432
+L+ QSP RC++E G FHY+IE +CYLVLCE + K+LAF YLE++ EF +Q+G +
Sbjct: 43 KLNEQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKK 102
Query: 433 LNTVTRPYTFIEFDTCMQRTRKQY 504
+ TV+RPY+FIEFDT +Q+T+K Y
Sbjct: 103 VPTVSRPYSFIEFDTFIQKTKKLY 126
Score = 77.4 bits (182), Expect = 6e-14
Identities = 36/68 (52%), Positives = 51/68 (75%)
Frame = +3
Query: 558 QLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYLNTKSMLVKVTAGA 737
+L DVQRIM+ NI++VLQRG LS LD+K NLS +S+KYR+DA YLN +S K+ A A
Sbjct: 141 ELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQDAKYLNMRSTYAKLAAVA 200
Query: 738 VIVLVIVL 761
V +++++
Sbjct: 201 VFFIMLIV 208
Score = 68.1 bits (159), Expect = 4e-11
Identities = 32/42 (76%), Positives = 38/42 (90%)
Frame = +2
Query: 128 MVLMTMIARVADGLPLAATMQEDEQSACNILEYQNQAKMLFR 253
MVL+TMIARVADGLPLAA+MQEDEQS ++ +YQ+QAK LFR
Sbjct: 1 MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFR 42
>BC007122-1|AAH07122.1| 307|Homo sapiens SEC22 vesicle trafficking
protein homolog A (S. cerevisiae) protein.
Length = 307
Score = 79.0 bits (186), Expect = 2e-14
Identities = 34/81 (41%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Frame = +1
Query: 265 QSPMRCSIETGPYLFHYLIENHICYLVLCERNYSKRLAFNYLEEIAQEFFQQYG-HRLNT 441
Q P RC+++TG Y +++ + Y++LC NY LAF++L+E+ +EF Y + NT
Sbjct: 46 QLPDRCTLKTGHYNINFISSLGVSYMMLCTENYPNVLAFSFLDELQKEFITTYNMMKTNT 105
Query: 442 VTRPYTFIEFDTCMQRTRKQY 504
RPY FIEFD +QRT+++Y
Sbjct: 106 AVRPYCFIEFDNFIQRTKQRY 126
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 122 LNMVLMTMIARVADGLPLAATMQEDEQSACNILEYQNQAKMLFRN*ALSP 271
++M+L + RV DGLPL+A+ D + + + E + KML R A P
Sbjct: 1 MSMILSASVIRVRDGLPLSAS--TDYEQSTGMQECRKYFKMLSRKLAQLP 48
>X92396-1|CAA63133.1| 220|Homo sapiens ORF protein.
Length = 220
Score = 51.2 bits (117), Expect = 5e-06
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +1
Query: 262 PQSPMRCSIETGPYLFHYLIENHICYLVLCERNYSKRLAFNYLEEIAQEFFQQYGHRLNT 441
P + + G YLFHY+ ++ I YL + + ++ + AFN+L EI + F YG R T
Sbjct: 37 PSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQT 96
Query: 442 VTRPYTF-IEFDTCMQRTRKQY 504
PY EF + + K +
Sbjct: 97 AL-PYAMNSEFSSVLAAQLKHH 117
Score = 35.9 bits (79), Expect = 0.19
Identities = 21/66 (31%), Positives = 39/66 (59%)
Frame = +3
Query: 558 QLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYLNTKSMLVKVTAGA 737
Q+ +++ IM++NID V QRG L L KT+NL S ++ + L ++M +K
Sbjct: 132 QVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNL-ARAMCMKNLKLT 190
Query: 738 VIVLVI 755
+I++++
Sbjct: 191 IIIIIV 196
>BC056141-1|AAH56141.1| 220|Homo sapiens synaptobrevin-like 1
protein.
Length = 220
Score = 51.2 bits (117), Expect = 5e-06
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +1
Query: 262 PQSPMRCSIETGPYLFHYLIENHICYLVLCERNYSKRLAFNYLEEIAQEFFQQYGHRLNT 441
P + + G YLFHY+ ++ I YL + + ++ + AFN+L EI + F YG R T
Sbjct: 37 PSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQT 96
Query: 442 VTRPYTF-IEFDTCMQRTRKQY 504
PY EF + + K +
Sbjct: 97 AL-PYAMNSEFSSVLAAQLKHH 117
Score = 35.9 bits (79), Expect = 0.19
Identities = 21/66 (31%), Positives = 39/66 (59%)
Frame = +3
Query: 558 QLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYLNTKSMLVKVTAGA 737
Q+ +++ IM++NID V QRG L L KT+NL S ++ + L ++M +K
Sbjct: 132 QVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNL-ARAMCMKNLKLT 190
Query: 738 VIVLVI 755
+I++++
Sbjct: 191 IIIIIV 196
>AK222794-1|BAD96514.1| 220|Homo sapiens synaptobrevin-like 1
variant protein.
Length = 220
Score = 51.2 bits (117), Expect = 5e-06
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +1
Query: 262 PQSPMRCSIETGPYLFHYLIENHICYLVLCERNYSKRLAFNYLEEIAQEFFQQYGHRLNT 441
P + + G YLFHY+ ++ I YL + + ++ + AFN+L EI + F YG R T
Sbjct: 37 PSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQT 96
Query: 442 VTRPYTF-IEFDTCMQRTRKQY 504
PY EF + + K +
Sbjct: 97 AP-PYAMNSEFSSVLAAQLKHH 117
Score = 35.9 bits (79), Expect = 0.19
Identities = 21/66 (31%), Positives = 39/66 (59%)
Frame = +3
Query: 558 QLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYLNTKSMLVKVTAGA 737
Q+ +++ IM++NID V QRG L L KT+NL S ++ + L ++M +K
Sbjct: 132 QVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNL-ARAMCMKNLKLT 190
Query: 738 VIVLVI 755
+I++++
Sbjct: 191 IIIIIV 196
>AJ295938-1|CAC16891.1| 260|Homo sapiens synaptobrevin like protein
1B protein.
Length = 260
Score = 51.2 bits (117), Expect = 5e-06
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +1
Query: 262 PQSPMRCSIETGPYLFHYLIENHICYLVLCERNYSKRLAFNYLEEIAQEFFQQYGHRLNT 441
P + + G YLFHY+ ++ I YL + + ++ + AFN+L EI + F YG R T
Sbjct: 37 PSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQT 96
Query: 442 VTRPYTF-IEFDTCMQRTRKQY 504
PY EF + + K +
Sbjct: 97 AL-PYAMNSEFSSVLAAQLKHH 117
>AJ271736-1|CAB96816.1| 220|Homo sapiens synaptobrevin-like 1
protein protein.
Length = 220
Score = 51.2 bits (117), Expect = 5e-06
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +1
Query: 262 PQSPMRCSIETGPYLFHYLIENHICYLVLCERNYSKRLAFNYLEEIAQEFFQQYGHRLNT 441
P + + G YLFHY+ ++ I YL + + ++ + AFN+L EI + F YG R T
Sbjct: 37 PSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQT 96
Query: 442 VTRPYTF-IEFDTCMQRTRKQY 504
PY EF + + K +
Sbjct: 97 AL-PYAMNSEFSSVLAAQLKHH 117
Score = 35.9 bits (79), Expect = 0.19
Identities = 21/66 (31%), Positives = 39/66 (59%)
Frame = +3
Query: 558 QLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYLNTKSMLVKVTAGA 737
Q+ +++ IM++NID V QRG L L KT+NL S ++ + L ++M +K
Sbjct: 132 QVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNL-ARAMCMKNLKLT 190
Query: 738 VIVLVI 755
+I++++
Sbjct: 191 IIIIIV 196
>BC018437-1|AAH18437.1| 250|Homo sapiens SEC22 vesicle trafficking
protein homolog C (S. cerevisiae) protein.
Length = 250
Score = 41.9 bits (94), Expect = 0.003
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 265 QSPMRCSIETGPYLFHYLIENHICYLVLCERNYSKRLAFNYLEEIAQEFFQQYGHR-LNT 441
Q P R S E + H+ + + +C +AF +LE + EF Y +
Sbjct: 46 QYPGRGSAEGCDFSIHFSSFGDVACMAICSCQCPAAMAFCFLETLWWEFTASYDTTCIGL 105
Query: 442 VTRPYTFIEFDTCMQRTR 495
+RPY F+EFD+ +Q+ +
Sbjct: 106 ASRPYAFLEFDSIIQKVK 123
>BC006178-1|AAH06178.1| 303|Homo sapiens SEC22 vesicle trafficking
protein homolog C (S. cerevisiae) protein.
Length = 303
Score = 41.9 bits (94), Expect = 0.003
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 265 QSPMRCSIETGPYLFHYLIENHICYLVLCERNYSKRLAFNYLEEIAQEFFQQYGHR-LNT 441
Q P R S E + H+ + + +C +AF +LE + EF Y +
Sbjct: 46 QYPGRGSAEGCDFSIHFSSFGDVACMAICSCQCPAAMAFCFLETLWWEFTASYDTTCIGL 105
Query: 442 VTRPYTFIEFDTCMQRTR 495
+RPY F+EFD+ +Q+ +
Sbjct: 106 ASRPYAFLEFDSIIQKVK 123
>AY359041-1|AAQ89400.1| 228|Homo sapiens SEC22C protein.
Length = 228
Score = 41.9 bits (94), Expect = 0.003
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 265 QSPMRCSIETGPYLFHYLIENHICYLVLCERNYSKRLAFNYLEEIAQEFFQQYGHR-LNT 441
Q P R S E + H+ + + +C +AF +LE + EF Y +
Sbjct: 46 QYPGRGSAEGCDFSIHFSSFGDVACMAICSCQCPAAMAFCFLETLWWEFTASYDTTCIGL 105
Query: 442 VTRPYTFIEFDTCMQRTR 495
+RPY F+EFD+ +Q+ +
Sbjct: 106 ASRPYAFLEFDSIIQKVK 123
>AF039568-1|AAD02171.1| 250|Homo sapiens vesicle trafficking
protein protein.
Length = 250
Score = 41.9 bits (94), Expect = 0.003
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 265 QSPMRCSIETGPYLFHYLIENHICYLVLCERNYSKRLAFNYLEEIAQEFFQQYGHR-LNT 441
Q P R S E + H+ + + +C +AF +LE + EF Y +
Sbjct: 46 QYPGRGSAEGCDFSIHFSSFGDVACMAICSCQCPAAMAFCFLETLWWEFTASYDTTCIGL 105
Query: 442 VTRPYTFIEFDTCMQRTR 495
+RPY F+EFD+ +Q+ +
Sbjct: 106 ASRPYAFLEFDSIIQKVK 123
>Z98751-4|CAM28272.1| 140|Homo sapiens vesicle-associated membrane
protein 4 protein.
Length = 140
Score = 38.3 bits (85), Expect = 0.036
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Frame = +3
Query: 546 HLAPQLGDVQRIMMQNIDDVLQRGAILSELDTKTQNL-------SMMSQKYRKDATYLNT 704
H+ Q+ +V +M +NI V++RG L EL K+++L S S++ R+ +
Sbjct: 54 HVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFSNRSKQLRRQMWWRGC 113
Query: 705 KSMLVKVTAGAVIVLVIVL 761
K + A+++LVI++
Sbjct: 114 KIKAIMALVAAILLLVIII 132
>Z98751-3|CAI21808.1| 141|Homo sapiens vesicle-associated membrane
protein 4 protein.
Length = 141
Score = 38.3 bits (85), Expect = 0.036
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Frame = +3
Query: 546 HLAPQLGDVQRIMMQNIDDVLQRGAILSELDTKTQNL-------SMMSQKYRKDATYLNT 704
H+ Q+ +V +M +NI V++RG L EL K+++L S S++ R+ +
Sbjct: 55 HVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFSNRSKQLRRQMWWRGC 114
Query: 705 KSMLVKVTAGAVIVLVIVL 761
K + A+++LVI++
Sbjct: 115 KIKAIMALVAAILLLVIII 133
>Z48924-1|CAA88760.1| 118|Homo sapiens Vamp1 protein.
Length = 118
Score = 38.3 bits (85), Expect = 0.036
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Frame = +3
Query: 558 QLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYL-------NTKSML 716
Q+ +V I+ N+D VL+R LSELD + L + ++ A L N K M+
Sbjct: 40 QVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWWKNCKMMI 99
Query: 717 VKVTAGAVIVLVIVL 761
+ T A+IV+VIV+
Sbjct: 100 MLGTICAIIVVVIVI 114
>CR457011-1|CAG33292.1| 141|Homo sapiens VAMP4 protein.
Length = 141
Score = 38.3 bits (85), Expect = 0.036
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Frame = +3
Query: 546 HLAPQLGDVQRIMMQNIDDVLQRGAILSELDTKTQNL-------SMMSQKYRKDATYLNT 704
H+ Q+ +V +M +NI V++RG L EL K+++L S S++ R+ +
Sbjct: 55 HVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFSNRSKQLRRQMWWRGC 114
Query: 705 KSMLVKVTAGAVIVLVIVL 761
K + A+++LVI++
Sbjct: 115 KIKAIMALVAAILLLVIII 133
>BC031264-1|AAH31264.1| 141|Homo sapiens VAMP4 protein protein.
Length = 141
Score = 38.3 bits (85), Expect = 0.036
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Frame = +3
Query: 546 HLAPQLGDVQRIMMQNIDDVLQRGAILSELDTKTQNL-------SMMSQKYRKDATYLNT 704
H+ Q+ +V +M +NI V++RG L EL K+++L S S++ R+ +
Sbjct: 55 HVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFSNRSKQLRRQMWWRGC 114
Query: 705 KSMLVKVTAGAVIVLVIVL 761
K + A+++LVI++
Sbjct: 115 KIKAIMALVAAILLLVIII 133
>BC007019-1|AAH07019.1| 140|Homo sapiens vesicle-associated
membrane protein 4 protein.
Length = 140
Score = 38.3 bits (85), Expect = 0.036
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Frame = +3
Query: 546 HLAPQLGDVQRIMMQNIDDVLQRGAILSELDTKTQNL-------SMMSQKYRKDATYLNT 704
H+ Q+ +V +M +NI V++RG L EL K+++L S S++ R+ +
Sbjct: 54 HVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFSNRSKQLRRQMWWRGC 113
Query: 705 KSMLVKVTAGAVIVLVIVL 761
K + A+++LVI++
Sbjct: 114 KIKAIMALVAAILLLVIII 132
>BC005974-1|AAH05974.1| 141|Homo sapiens VAMP4 protein protein.
Length = 141
Score = 38.3 bits (85), Expect = 0.036
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Frame = +3
Query: 546 HLAPQLGDVQRIMMQNIDDVLQRGAILSELDTKTQNL-------SMMSQKYRKDATYLNT 704
H+ Q+ +V +M +NI V++RG L EL K+++L S S++ R+ +
Sbjct: 55 HVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFSNRSKQLRRQMWWRGC 114
Query: 705 KSMLVKVTAGAVIVLVIVL 761
K + A+++LVI++
Sbjct: 115 KIKAIMALVAAILLLVIII 133
>AL035296-1|CAA22896.1| 141|Homo sapiens hypothetical protein
protein.
Length = 141
Score = 38.3 bits (85), Expect = 0.036
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Frame = +3
Query: 546 HLAPQLGDVQRIMMQNIDDVLQRGAILSELDTKTQNL-------SMMSQKYRKDATYLNT 704
H+ Q+ +V +M +NI V++RG L EL K+++L S S++ R+ +
Sbjct: 55 HVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFSNRSKQLRRQMWWRGC 114
Query: 705 KSMLVKVTAGAVIVLVIVL 761
K + A+++LVI++
Sbjct: 115 KIKAIMALVAAILLLVIII 133
>AF044310-1|AAC24032.1| 141|Homo sapiens VAMP 4 protein.
Length = 141
Score = 37.5 bits (83), Expect = 0.062
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Frame = +3
Query: 546 HLAPQLGDVQRIMMQNIDDVLQRGAILSELDTKTQNL-------SMMSQKYRKDATYLNT 704
H+ Q+ +V +M +NI V++RG L EL K+++L S S++ R+ +
Sbjct: 55 HVQNQVDEVIDVMPENITKVIERGERLDELQDKSESLSDNATAFSNRSKQLRRQMWWRGC 114
Query: 705 KSMLVKVTAGAVIVLVIVL 761
K + A+++LVI++
Sbjct: 115 KIKAIMALVAAILLLVIII 133
>M36205-1|AAA60604.1| 116|Homo sapiens SYB2 protein.
Length = 116
Score = 36.7 bits (81), Expect = 0.11
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Frame = +3
Query: 558 QLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYL-------NTKSML 716
Q+ +V IM N+D VL+R LSELD + L + ++ A L N K M+
Sbjct: 38 QVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNLKMMI 97
Query: 717 VKVTAGAVIVLVIVL 761
+ A+I+++I++
Sbjct: 98 ILGVICAIILIIIIV 112
>CR456995-1|CAG33276.1| 100|Homo sapiens VAMP5 protein.
Length = 100
Score = 36.7 bits (81), Expect = 0.11
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Frame = +3
Query: 546 HLAPQLGDVQRIMMQNIDDVLQRGAILSELDTKTQNL-------SMMSQKYRKDATYLNT 704
+L ++ V+ IM QN++ +L RG L L KT++L SQK + + N
Sbjct: 15 NLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKTTSQKVARKFWWKNV 74
Query: 705 KS-MLVKVTAGAVIVLVIVLSSG 770
K +L++V +I+ +++ ++G
Sbjct: 75 KMIVLIRVIVFIIILFIVLFATG 97
>BC033870-1|AAH33870.1| 116|Homo sapiens vesicle-associated
membrane protein 2 (synaptobrevin 2) protein.
Length = 116
Score = 36.7 bits (81), Expect = 0.11
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Frame = +3
Query: 558 QLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYL-------NTKSML 716
Q+ +V IM N+D VL+R LSELD + L + ++ A L N K M+
Sbjct: 38 QVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNLKMMI 97
Query: 717 VKVTAGAVIVLVIVL 761
+ A+I+++I++
Sbjct: 98 ILGVICAIILIIIIV 112
>BC019608-1|AAH19608.1| 116|Homo sapiens vesicle-associated
membrane protein 2 (synaptobrevin 2) protein.
Length = 116
Score = 36.7 bits (81), Expect = 0.11
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Frame = +3
Query: 558 QLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYL-------NTKSML 716
Q+ +V IM N+D VL+R LSELD + L + ++ A L N K M+
Sbjct: 38 QVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNLKMMI 97
Query: 717 VKVTAGAVIVLVIVL 761
+ A+I+++I++
Sbjct: 98 ILGVICAIILIIIIV 112
>BC002737-1|AAH02737.3| 116|Homo sapiens vesicle-associated
membrane protein 2 (synaptobrevin 2) protein.
Length = 116
Score = 36.7 bits (81), Expect = 0.11
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Frame = +3
Query: 558 QLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYL-------NTKSML 716
Q+ +V IM N+D VL+R LSELD + L + ++ A L N K M+
Sbjct: 38 QVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNLKMMI 97
Query: 717 VKVTAGAVIVLVIVL 761
+ A+I+++I++
Sbjct: 98 ILGVICAIILIIIIV 112
>AJ225044-1|CAA12385.1| 116|Homo sapiens vesicle associated
membrane protein 2 protein.
Length = 116
Score = 36.7 bits (81), Expect = 0.11
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Frame = +3
Query: 558 QLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYL-------NTKSML 716
Q+ +V IM N+D VL+R LSELD + L + ++ A L N K M+
Sbjct: 38 QVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNLKMMI 97
Query: 717 VKVTAGAVIVLVIVL 761
+ A+I+++I++
Sbjct: 98 ILGVICAIILIIIIV 112
>AF135372-1|AAF15551.1| 116|Homo sapiens synaptobrevin 2 protein.
Length = 116
Score = 36.7 bits (81), Expect = 0.11
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Frame = +3
Query: 558 QLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYL-------NTKSML 716
Q+ +V IM N+D VL+R LSELD + L + ++ A L N K M+
Sbjct: 38 QVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNLKMMI 97
Query: 717 VKVTAGAVIVLVIVL 761
+ A+I+++I++
Sbjct: 98 ILGVICAIILIIIIV 112
>M36200-1|AAA60603.1| 118|Homo sapiens SYB1 protein.
Length = 118
Score = 36.3 bits (80), Expect = 0.14
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Frame = +3
Query: 558 QLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYL-------NTKSML 716
Q+ +V I+ N+D VL+R LSELD + L + ++ A L N K M+
Sbjct: 40 QVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWWKNCKMMI 99
Query: 717 VKVTAGAVIVLVIVL 761
+ A+IV+VIV+
Sbjct: 100 MLGAICAIIVVVIVI 114
>BC023286-1|AAH23286.1| 117|Homo sapiens vesicle-associated
membrane protein 1 (synaptobrevin 1) protein.
Length = 117
Score = 35.9 bits (79), Expect = 0.19
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Frame = +3
Query: 558 QLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYLNTK------SMLV 719
Q+ +V I+ N+D VL+R LSELD + L + ++ A L K M++
Sbjct: 40 QVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWWKNCKMMI 99
Query: 720 KVTAGAVIVLVIVLS 764
+ A I++V+++S
Sbjct: 100 MLGAICAIIVVVIVS 114
>AJ549301-1|CAD70593.2| 179|Homo sapiens tetanus insensitive VAMP
(Ti-VAMP) protein.
Length = 179
Score = 35.9 bits (79), Expect = 0.19
Identities = 21/66 (31%), Positives = 39/66 (59%)
Frame = +3
Query: 558 QLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYLNTKSMLVKVTAGA 737
Q+ +++ IM++NID V QRG L L KT+NL S ++ + L ++M +K
Sbjct: 91 QVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNL-ARAMCMKNLKLT 149
Query: 738 VIVLVI 755
+I++++
Sbjct: 150 IIIIIV 155
>Z98884-2|CAB63146.1| 100|Homo sapiens vesicle-associated membrane
protein 3 (cellubrevin) protein.
Length = 100
Score = 35.5 bits (78), Expect = 0.25
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = +3
Query: 558 QLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYLNTKSMLVKVTAGA 737
Q+ +V IM N+D VL+R LSELD + L + ++ A L K A
Sbjct: 21 QVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNCKMWA 80
Query: 738 VIVLVIVL 761
+ + V+V+
Sbjct: 81 IGITVLVI 88
>U64520-1|AAB05814.1| 100|Homo sapiens synaptobrevin-3 protein.
Length = 100
Score = 35.5 bits (78), Expect = 0.25
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = +3
Query: 558 QLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYLNTKSMLVKVTAGA 737
Q+ +V IM N+D VL+R LSELD + L + ++ A L K A
Sbjct: 21 QVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNCKMWA 80
Query: 738 VIVLVIVL 761
+ + V+V+
Sbjct: 81 IGITVLVI 88
>CR542231-1|CAG47027.1| 116|Homo sapiens VAMP1 protein.
Length = 116
Score = 35.5 bits (78), Expect = 0.25
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Frame = +3
Query: 558 QLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYL-------NTKSML 716
Q+ +V I+ N+D VL+R LSELD + L + ++ A L N K M+
Sbjct: 40 QVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWWKNCKMMI 99
Query: 717 VKVTAGAVIVLVIV 758
+ A+IV+VIV
Sbjct: 100 MLGAICAIIVVVIV 113
>CR542214-1|CAG47010.1| 116|Homo sapiens VAMP1 protein.
Length = 116
Score = 35.5 bits (78), Expect = 0.25
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Frame = +3
Query: 558 QLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYL-------NTKSML 716
Q+ +V I+ N+D VL+R LSELD + L + ++ A L N K M+
Sbjct: 40 QVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWWKNCKMMI 99
Query: 717 VKVTAGAVIVLVIV 758
+ A+IV+VIV
Sbjct: 100 MLGAICAIIVVVIV 113
>CR542154-1|CAG46951.1| 100|Homo sapiens VAMP3 protein.
Length = 100
Score = 35.5 bits (78), Expect = 0.25
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = +3
Query: 558 QLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYLNTKSMLVKVTAGA 737
Q+ +V IM N+D VL+R LSELD + L + ++ A L K A
Sbjct: 21 QVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNCKMWA 80
Query: 738 VIVLVIVL 761
+ + V+V+
Sbjct: 81 IGITVLVI 88
>CR542145-1|CAG46942.1| 100|Homo sapiens VAMP3 protein.
Length = 100
Score = 35.5 bits (78), Expect = 0.25
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = +3
Query: 558 QLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYLNTKSMLVKVTAGA 737
Q+ +V IM N+D VL+R LSELD + L + ++ A L K A
Sbjct: 21 QVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNCKMWA 80
Query: 738 VIVLVIVL 761
+ + V+V+
Sbjct: 81 IGITVLVI 88
>BT007327-1|AAP35991.1| 100|Homo sapiens vesicle-associated
membrane protein 3 (cellubrevin) protein.
Length = 100
Score = 35.5 bits (78), Expect = 0.25
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = +3
Query: 558 QLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYLNTKSMLVKVTAGA 737
Q+ +V IM N+D VL+R LSELD + L + ++ A L K A
Sbjct: 21 QVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNCKMWA 80
Query: 738 VIVLVIVL 761
+ + V+V+
Sbjct: 81 IGITVLVI 88
>BT006700-1|AAP35346.1| 100|Homo sapiens vesicle-associated
membrane protein 8 (endobrevin) protein.
Length = 100
Score = 35.5 bits (78), Expect = 0.25
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +3
Query: 546 HLAPQLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYLNTK---SML 716
+L ++ V+ IM QN++ +L RG L L KT++L S+ ++ + + K +
Sbjct: 15 NLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKTTSQKVARKFWWKNV 74
Query: 717 VKVTAGAVIVLVIVL 761
+ VIV +I+L
Sbjct: 75 KMIVLICVIVFIIIL 89
>BC007050-1|AAH07050.1| 100|Homo sapiens vesicle-associated
membrane protein 3 (cellubrevin) protein.
Length = 100
Score = 35.5 bits (78), Expect = 0.25
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = +3
Query: 558 QLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYLNTKSMLVKVTAGA 737
Q+ +V IM N+D VL+R LSELD + L + ++ A L K A
Sbjct: 21 QVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNCKMWA 80
Query: 738 VIVLVIVL 761
+ + V+V+
Sbjct: 81 IGITVLVI 88
>BC005941-1|AAH05941.1| 100|Homo sapiens vesicle-associated
membrane protein 3 (cellubrevin) protein.
Length = 100
Score = 35.5 bits (78), Expect = 0.25
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = +3
Query: 558 QLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYLNTKSMLVKVTAGA 737
Q+ +V IM N+D VL+R LSELD + L + ++ A L K A
Sbjct: 21 QVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNCEMWA 80
Query: 738 VIVLVIVL 761
+ + V+V+
Sbjct: 81 IGITVLVI 88
>BC003570-1|AAH03570.1| 100|Homo sapiens vesicle-associated
membrane protein 3 (cellubrevin) protein.
Length = 100
Score = 35.5 bits (78), Expect = 0.25
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = +3
Query: 558 QLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYLNTKSMLVKVTAGA 737
Q+ +V IM N+D VL+R LSELD + L + ++ A L K A
Sbjct: 21 QVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNCKMWA 80
Query: 738 VIVLVIVL 761
+ + V+V+
Sbjct: 81 IGITVLVI 88
>BC001634-1|AAH01634.1| 100|Homo sapiens vesicle-associated
membrane protein 8 (endobrevin) protein.
Length = 100
Score = 35.5 bits (78), Expect = 0.25
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +3
Query: 546 HLAPQLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYLNTK---SML 716
+L ++ V+ IM QN++ +L RG L L KT++L S+ ++ + + K +
Sbjct: 15 NLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKTTSQKVARKFWWKNV 74
Query: 717 VKVTAGAVIVLVIVL 761
+ VIV +I+L
Sbjct: 75 KMIVLICVIVFIIIL 89
>AF060538-1|AAC28336.1| 116|Homo sapiens vesicle associated
membrane protein-1B protein.
Length = 116
Score = 35.5 bits (78), Expect = 0.25
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Frame = +3
Query: 558 QLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYL-------NTKSML 716
Q+ +V I+ N+D VL+R LSELD + L + ++ A L N K M+
Sbjct: 40 QVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWWKNCKMMI 99
Query: 717 VKVTAGAVIVLVIV 758
+ A+IV+VIV
Sbjct: 100 MLGAICAIIVVVIV 113
>AF053233-1|AAC08434.1| 100|Homo sapiens endobrevin protein.
Length = 100
Score = 35.5 bits (78), Expect = 0.25
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +3
Query: 546 HLAPQLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYLNTK---SML 716
+L ++ V+ IM QN++ +L RG L L KT++L S+ ++ + + K +
Sbjct: 15 NLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKTTSQKVARKFWWKNV 74
Query: 717 VKVTAGAVIVLVIVL 761
+ VIV +I+L
Sbjct: 75 KMIVLICVIVFIIIL 89
>AC016753-3|AAY24341.1| 100|Homo sapiens unknown protein.
Length = 100
Score = 35.5 bits (78), Expect = 0.25
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +3
Query: 546 HLAPQLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYLNTK---SML 716
+L ++ V+ IM QN++ +L RG L L KT++L S+ ++ + + K +
Sbjct: 15 NLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKTTSQKVARKFWWKNV 74
Query: 717 VKVTAGAVIVLVIVL 761
+ VIV +I+L
Sbjct: 75 KMIVLICVIVFIIIL 89
>X76785-2|CAA54180.1| 342|Homo sapiens hypothetical protein
protein.
Length = 342
Score = 33.9 bits (74), Expect = 0.77
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 815 ISPRQTVTIMESSREPRRKHNHEHDN-CSGCHLHQH 711
+S T TI++ S +KH H H + S CH+H H
Sbjct: 114 LSQTHTTTIIQHSHTNTQKHTHAHSHTLSHCHIHTH 149
>U30883-1|AAA93073.1| 344|Homo sapiens SRp55-1 protein.
Length = 344
Score = 31.1 bits (67), Expect = 5.4
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 355 RNYSKRLAFNYLEEIAQEFFQQYGHRLNT-VTRPYTFIEFD 474
R Y RL++N E+ Q FF YG L + Y F+EF+
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFE 43
>U30829-1|AAA93072.1| 335|Homo sapiens SRp55-3 protein.
Length = 335
Score = 31.1 bits (67), Expect = 5.4
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 355 RNYSKRLAFNYLEEIAQEFFQQYGHRLNT-VTRPYTFIEFD 474
R Y RL++N E+ Q FF YG L + Y F+EF+
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFE 43
>U30828-1|AAA93071.1| 135|Homo sapiens SRp55-2 protein.
Length = 135
Score = 31.1 bits (67), Expect = 5.4
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 355 RNYSKRLAFNYLEEIAQEFFQQYGHRLNT-VTRPYTFIEFD 474
R Y RL++N E+ Q FF YG L + Y F+EF+
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFE 43
>BC006832-1|AAH06832.1| 344|Homo sapiens splicing factor,
arginine/serine-rich 6 protein.
Length = 344
Score = 31.1 bits (67), Expect = 5.4
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 355 RNYSKRLAFNYLEEIAQEFFQQYGHRLNT-VTRPYTFIEFD 474
R Y RL++N E+ Q FF YG L + Y F+EF+
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFE 43
>AL031681-3|CAB43960.1| 344|Homo sapiens splicing factor,
arginine/serine-rich 6 protein.
Length = 344
Score = 31.1 bits (67), Expect = 5.4
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 355 RNYSKRLAFNYLEEIAQEFFQQYGHRLNT-VTRPYTFIEFD 474
R Y RL++N E+ Q FF YG L + Y F+EF+
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFE 43
>AB208976-1|BAD92213.1| 279|Homo sapiens arginine/serine-rich
splicing factor 6 variant protein.
Length = 279
Score = 31.1 bits (67), Expect = 5.4
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 355 RNYSKRLAFNYLEEIAQEFFQQYGHRLNT-VTRPYTFIEFD 474
R Y RL++N E+ Q FF YG L + Y F+EF+
Sbjct: 37 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFE 77
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,531,865
Number of Sequences: 237096
Number of extensions: 1849948
Number of successful extensions: 16186
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 12351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16178
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11039988564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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