Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021112
(865 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g11890.1 68414.m01371 vesicle transport protein SEC22, putati... 103 1e-22
At5g52270.1 68418.m06487 vesicle transport protein-related simil... 60 2e-09
At2g33120.1 68415.m04060 synaptobrevin-related protein / vesicl... 46 2e-05
At1g04750.1 68414.m00470 synaptobrevin family protein similar to... 46 2e-05
At2g32670.1 68415.m03994 synaptobrevin family protein similar to... 45 6e-05
At1g04760.1 68414.m00472 synaptobrevin family protein similar to... 45 6e-05
At5g11150.1 68418.m01303 synaptobrevin / vesicle-associated memb... 44 1e-04
At3g54300.1 68416.m06001 synaptobrevin family protein similar to... 43 2e-04
At5g22360.1 68418.m02609 synaptobrevin family protein similar to... 43 3e-04
At4g15780.1 68417.m02402 synaptobrevin-related family protein si... 41 0.001
At2g25340.1 68415.m03031 synaptobrevin family protein similar to... 40 0.002
At2g33110.1 68415.m04059 synaptobrevin family protein similar to... 38 0.011
At4g32150.1 68417.m04573 synaptobrevin family protein similar to... 37 0.015
At3g13250.1 68416.m01668 hypothetical protein low similarity to ... 32 0.57
At3g03750.2 68416.m00381 SET domain-containing protein low simil... 29 4.0
At3g03750.1 68416.m00380 SET domain-containing protein low simil... 29 4.0
At1g54830.3 68414.m06253 CCAAT-box binding transcription factor ... 28 9.2
At1g54830.2 68414.m06252 CCAAT-box binding transcription factor ... 28 9.2
At1g54830.1 68414.m06251 CCAAT-box binding transcription factor ... 28 9.2
At1g08970.4 68414.m01000 CCAAT-box binding transcription factor ... 28 9.2
At1g08970.3 68414.m00999 CCAAT-box binding transcription factor ... 28 9.2
At1g08970.2 68414.m00998 CCAAT-box binding transcription factor ... 28 9.2
At1g08970.1 68414.m00997 CCAAT-box binding transcription factor ... 28 9.2
>At1g11890.1 68414.m01371 vesicle transport protein SEC22, putative
identified as SEC22 by Raikhel, NV, et al. in Plant
Physiol. 124: 1558-69 (2000); similar to vesicle
trafficking protein gb|U91538 from Mus musculus; ESTs
gb|F15494 and gb|F14097 come from this gene
Length = 218
Score = 103 bits (248), Expect = 1e-22
Identities = 41/76 (53%), Positives = 57/76 (75%)
Frame = +1
Query: 277 RCSIETGPYLFHYLIENHICYLVLCERNYSKRLAFNYLEEIAQEFFQQYGHRLNTVTRPY 456
R S+ETGPY+FHY+IE +CYL +C+R+Y K+LAF YLE++ EF + G + T RPY
Sbjct: 52 RMSVETGPYVFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGPNIETAARPY 111
Query: 457 TFIEFDTCMQRTRKQY 504
FI+FDT +Q+T+K Y
Sbjct: 112 AFIKFDTFIQKTKKLY 127
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +2
Query: 128 MVLMTMIARVADGLPLAATMQEDEQSACNILEYQNQAKMLFRN 256
MV MT+IARV DGLPLA + +D + + Y+ Q K LF+N
Sbjct: 1 MVKMTLIARVTDGLPLAEGL-DDGRDLPDSDMYKQQVKALFKN 42
>At5g52270.1 68418.m06487 vesicle transport protein-related similar
to vesicle trafficking protein sec22b [Mus musculus]
GI:1907386
Length = 214
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = +1
Query: 307 FHYLIENHICYLVLCERNYSKRLAFNYLEEIAQEFFQQYGHRL-NTVTRPYTFIEFDTCM 483
FH+L+E ICY+ L + +Y ++L FNYL+ + +E + L +++PY+FI F +
Sbjct: 64 FHFLVEKKICYIALSDSSYPRKLLFNYLQNLNKELDKLDEKALIQKISKPYSFIRFGKII 123
Query: 484 QRTRKQY 504
R RKQY
Sbjct: 124 GRIRKQY 130
Score = 31.9 bits (69), Expect = 0.57
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 128 MVLMTMIARVADGLPLAATM-QEDEQSACNILEYQNQAKMLFR 253
MV +T++ RV DGLPLA +++ + L Y+ QA+ L +
Sbjct: 1 MVKLTIVGRVEDGLPLAQDQTYVNQEDNTSFLLYKQQAEFLLK 43
>At2g33120.1 68415.m04060 synaptobrevin-related protein /
vesicle-associated membrane protein 722 (VAMP722) (SAR1)
identical to r to Vesicle-associated membrane protein
722 (AtVAMP722) Synaptobrevin-related protein 1
(SP:P47192) {Arabidopsis thaliana}; identical to cDNA
synaptobrevin-related protein (SAR1) GI:600709
Length = 221
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Frame = +3
Query: 558 QLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYLNTK----SMLVKV 725
Q+ +V+ +MM+NI+ VL RG + L KT+NL +Q +R T + K +M +K+
Sbjct: 137 QVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTQMRRKMWFQNMKIKL 196
Query: 726 TAGAVIVLVIVL 761
A+I+ +I++
Sbjct: 197 IVLAIIIALILI 208
Score = 35.1 bits (77), Expect = 0.061
Identities = 14/55 (25%), Positives = 30/55 (54%)
Frame = +1
Query: 262 PQSPMRCSIETGPYLFHYLIENHICYLVLCERNYSKRLAFNYLEEIAQEFFQQYG 426
P S + + + F+YL+EN Y V+ + +++ +LE + ++F ++YG
Sbjct: 40 PSSNNKFTYNCDGHTFNYLVENGFTYCVVAVDSAGRQIPMAFLERVKEDFNKRYG 94
>At1g04750.1 68414.m00470 synaptobrevin family protein similar to
Vesicle-associated membrane protein 722 (AtVAMP722)
Synaptobrevin-related protein 1 (SP:P47192) {Arabidopsis
thaliana};
Length = 219
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Frame = +3
Query: 558 QLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYLNTK----SMLVKV 725
Q+ +V+ +MM+NI+ VL RG + L KT+NL +Q +R T + K +M +K+
Sbjct: 137 QVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTTGTQMRRKMWLQNMKIKL 196
Query: 726 TAGAVI---VLVIVLS 764
A+I +L+IVLS
Sbjct: 197 IVLAIIIALILIIVLS 212
Score = 34.3 bits (75), Expect = 0.11
Identities = 13/55 (23%), Positives = 31/55 (56%)
Frame = +1
Query: 262 PQSPMRCSIETGPYLFHYLIENHICYLVLCERNYSKRLAFNYLEEIAQEFFQQYG 426
P S + + + F+YL+E+ Y V+ + +++ ++LE + ++F ++YG
Sbjct: 40 PSSNNKFTYNCDGHTFNYLVEDGFTYCVVAVDSAGRQIPMSFLERVKEDFNKRYG 94
>At2g32670.1 68415.m03994 synaptobrevin family protein similar to
vesicle-associated membrane protein 7 [Rattus
norvegicus] GI:9502258, SP|P51809 Synaptobrevin-like
protein 1 {Homo sapiens}; contains Pfam profile PF00957:
Synaptobrevin
Length = 285
Score = 45.2 bits (102), Expect = 6e-05
Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Frame = +3
Query: 558 QLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYLNTK----SMLVK- 722
Q+ +V+ +MM+NI+ VL RG + L KT+NL +Q +R T + K +M +K
Sbjct: 202 QVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKIRRKMWFENMKIKL 261
Query: 723 VTAGAVIVLVIVL 761
+ G +I L++++
Sbjct: 262 IVLGIIITLILII 274
Score = 36.3 bits (80), Expect = 0.026
Identities = 14/55 (25%), Positives = 30/55 (54%)
Frame = +1
Query: 262 PQSPMRCSIETGPYLFHYLIENHICYLVLCERNYSKRLAFNYLEEIAQEFFQQYG 426
P S + + + F+YL+EN Y V+ + +++ +LE + ++F ++YG
Sbjct: 105 PSSNNKFTYNCDGHTFNYLVENGFTYCVVAVESVGRQIPMAFLERVKEDFNKRYG 159
>At1g04760.1 68414.m00472 synaptobrevin family protein similar to
Vesicle-associated membrane protein 722 (AtVAMP722)
Synaptobrevin-related protein 1 (SP:P47192) {Arabidopsis
thaliana}
Length = 220
Score = 45.2 bits (102), Expect = 6e-05
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Frame = +3
Query: 543 SHLAPQLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYLNTK----S 710
S + Q+ +V+ +MM+NI+ VL RG + L KT+NL +Q +R T + K +
Sbjct: 132 SKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKMKRKLWFEN 191
Query: 711 MLVKVTAGAVIVLVIVL 761
M +K+ +IV +I++
Sbjct: 192 MKIKLIVFGIIVALILI 208
Score = 32.3 bits (70), Expect = 0.43
Identities = 13/55 (23%), Positives = 29/55 (52%)
Frame = +1
Query: 262 PQSPMRCSIETGPYLFHYLIENHICYLVLCERNYSKRLAFNYLEEIAQEFFQQYG 426
P S + + + F+YL +N Y V+ + +++ +LE + ++F ++YG
Sbjct: 40 PSSNNKFTYNCDGHTFNYLADNGFTYCVVVIESAGRQIPMAFLERVKEDFNKRYG 94
>At5g11150.1 68418.m01303 synaptobrevin / vesicle-associated
membrane protein 713 (VAMP713) identified as AtVAMP713
by Sanderfoot, A.A., et al. in Plant Physiol. 124:
1558-69 (2000); similar to Vesicle-associated membrane
protein 722 (AtVAMP722) Synaptobrevin-related protein 1
(SP:P47192) {Arabidopsis thaliana}; synaptobrevin-like
protein Sybl1, Mus musculus, EMBL:MMU133536
Length = 221
Score = 44.4 bits (100), Expect = 1e-04
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +3
Query: 543 SHLAPQLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYLNTKSML-- 716
S + ++ V+ +M++NID VL RG L L KT+N+ + ++RK A T
Sbjct: 129 SRIKGEMSQVRNVMIENIDKVLDRGERLELLVDKTENMQGNTFRFRKQARRYRTIMWWRN 188
Query: 717 VKVTAGAVIVLVIVL 761
VK+T ++VL +V+
Sbjct: 189 VKLTIALILVLALVV 203
Score = 31.1 bits (67), Expect = 0.99
Identities = 14/68 (20%), Positives = 31/68 (45%)
Frame = +1
Query: 301 YLFHYLIENHICYLVLCERNYSKRLAFNYLEEIAQEFFQQYGHRLNTVTRPYTFIEFDTC 480
Y+FH + + L + + + + F +L++I Q F + YG +++ EF
Sbjct: 52 YIFHVKRTDGLTVLCMADETAGRNIPFAFLDDIHQRFVKTYGRAIHSAQAYSMNDEFSRV 111
Query: 481 MQRTRKQY 504
+ + + Y
Sbjct: 112 LSQQMEFY 119
>At3g54300.1 68416.m06001 synaptobrevin family protein similar to
vesicle-associated membrane protein 7B (At VAMP7B),
Arabidopsis thaliana, EMBL:AF025333
Length = 240
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Frame = +3
Query: 543 SHLAPQLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYLNTK----S 710
S L Q+ +V+ IMM NI+ VL RG + L KT+NL + +++ L K S
Sbjct: 151 SKLKAQITEVKGIMMDNIEKVLDRGEKIELLVDKTENLQFQADSFQRQGRQLRRKMWLQS 210
Query: 711 MLVK-VTAGAVIVLVIVL 761
+ +K + AGAV ++++
Sbjct: 211 LQMKLMVAGAVFSFILIV 228
>At5g22360.1 68418.m02609 synaptobrevin family protein similar to
Synaptobrevin-like protein 1 (SP:P51809) [Homo sapiens]
Length = 221
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 253 ELSPQ-SPMRCSIETGPYLFHYLIENHICYLVLCERNYSKRLAFNYLEEIAQEFFQQYG 426
+LSP+ S R Y+FH L + + +L + + +R+ F+YLEEI F + YG
Sbjct: 35 KLSPEISDERLCFSQDRYIFHILRSDGLTFLCMANDTFGRRVPFSYLEEIHMRFMKNYG 93
Score = 35.5 bits (78), Expect = 0.046
Identities = 19/76 (25%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Frame = +3
Query: 558 QLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKD------ATYLNTKSMLV 719
++ +++ +M++NI+ +++RG + L KT + S +RK A ++ +LV
Sbjct: 134 EVSEIRSVMVENIEKIMERGDRIELLVDKTATMQDSSFHFRKQSKRLRRALWMKNAKLLV 193
Query: 720 KVTAGAVIVLVIVLSS 767
+T V +L I+++S
Sbjct: 194 LLTCLIVFLLYIIIAS 209
>At4g15780.1 68417.m02402 synaptobrevin-related family protein
similar to Vesicle-associated membrane protein 722
(AtVAMP722) Synaptobrevin-related protein 1 (SP:P47192)
{Arabidopsis thaliana}
Length = 194
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/42 (40%), Positives = 29/42 (69%)
Frame = +3
Query: 558 QLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRK 683
Q+ +V+ IM++NID + RG L+ L KT+NL +++Y+K
Sbjct: 138 QVSEVKSIMLENIDKAIDRGENLTVLTDKTENLRSQAREYKK 179
Score = 35.5 bits (78), Expect = 0.046
Identities = 18/77 (23%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +1
Query: 199 AERVQYT-RVPESG*NAV*ELSPQSPMRCSIETGPYLFHYLIENHICYLVLCERNYSKRL 375
AE ++T P + +L S + + + F++L+E+ Y V+ + + SK++
Sbjct: 19 AEYTEFTGNFPSIAAQCLQKLPSSSNSKFTYNCDHHTFNFLVEDAYAYCVVAKDSLSKQI 78
Query: 376 AFNYLEEIAQEFFQQYG 426
+ +LE + +F ++YG
Sbjct: 79 SIAFLERVKADFKKRYG 95
>At2g25340.1 68415.m03031 synaptobrevin family protein similar to
Synaptobrevin-like protein 1 (SP:P51809) [Homo sapiens]
Length = 219
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Frame = +3
Query: 543 SHLAPQLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYLNTKSML-- 716
S + ++ V+ +M++NID++L RG L L KT N+ + ++RK N
Sbjct: 128 SRIKGEMNQVRDVMIENIDNILDRGERLELLVDKTANMQGNTFRFRKQTRRFNNTVWWRN 187
Query: 717 VKVTAGAVIVLVIVLSSG 770
K+T ++VL++++ G
Sbjct: 188 CKLTLLLILVLLVIIYIG 205
Score = 35.5 bits (78), Expect = 0.046
Identities = 16/68 (23%), Positives = 34/68 (50%)
Frame = +1
Query: 301 YLFHYLIENHICYLVLCERNYSKRLAFNYLEEIAQEFFQQYGHRLNTVTRPYTFIEFDTC 480
Y+FH + + L + + + +R+ F++LE+I Q F + YG +++ EF
Sbjct: 51 YVFHVKRTDGLTVLCMADEDAGRRIPFSFLEDIHQRFVRTYGRAIHSAQAYAMNDEFSRV 110
Query: 481 MQRTRKQY 504
+ + + Y
Sbjct: 111 LNQQIEYY 118
>At2g33110.1 68415.m04059 synaptobrevin family protein similar to
Vesicle-associated membrane protein 722 (AtVAMP722)
Synaptobrevin-related protein 1 (SP:P47192) {Arabidopsis
thaliana}
Length = 217
Score = 37.5 bits (83), Expect = 0.011
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Frame = +3
Query: 558 QLGDVQRIMMQNIDDVLQRGAI---LSELDTKTQNLSMMSQKYRKDATYLNTKSMLVKVT 728
Q+ +V+ +MM+NI+ VL RG I L +++ Q + + ++ + N K L+ +
Sbjct: 137 QVSEVKSLMMENIEKVLARGVICEMLGSSESQPQAFYIKRTQMKRKKWFQNMKIKLIVLA 196
Query: 729 AGAVIVLVIVLS 764
++L+I+LS
Sbjct: 197 IIIALILIIILS 208
Score = 33.1 bits (72), Expect = 0.25
Identities = 13/55 (23%), Positives = 29/55 (52%)
Frame = +1
Query: 262 PQSPMRCSIETGPYLFHYLIENHICYLVLCERNYSKRLAFNYLEEIAQEFFQQYG 426
P S + + + F+ L+EN Y V+ + + + +LE + ++F+++YG
Sbjct: 40 PSSNNKFTYNCDGHTFNDLVENGFTYCVVAVDSAGREIPMAFLERVKEDFYKRYG 94
>At4g32150.1 68417.m04573 synaptobrevin family protein similar to
Synaptobrevin-like protein 1 (SP:P51809) [Homo sapiens]
Length = 219
Score = 37.1 bits (82), Expect = 0.015
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +3
Query: 558 QLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLSMMSQKYRKDATYL--NTKSMLVKVTA 731
++ V+ +M++NID VL RG L L KT N+ + ++RK A N K+T
Sbjct: 133 EMNQVRGVMIENIDKVLDRGERLELLVDKTANMQGNTFRFRKQARRFRSNVWWRNCKLTV 192
Query: 732 GAVIVLVIVL 761
+++L++++
Sbjct: 193 LLILLLLVII 202
Score = 35.9 bits (79), Expect = 0.035
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +1
Query: 301 YLFHYLIENHICYLVLCERNYSKRLAFNYLEEIAQEFFQQYGHRLNT 441
Y+FH + + L + E +R+ F +LE+I Q F + YG ++T
Sbjct: 51 YVFHVKRTDGLTVLCMAEETAGRRIPFAFLEDIHQRFVRTYGRAVHT 97
>At3g13250.1 68416.m01668 hypothetical protein low similarity to
SP|P07271 DNA repair and recombination protein PIF1,
mitochondrial precursor {Saccharomyces cerevisiae}
Length = 1419
Score = 31.9 bits (69), Expect = 0.57
Identities = 19/67 (28%), Positives = 27/67 (40%)
Frame = -2
Query: 468 LYERVRTSHGVQPVSVLLEEFLCYFLEIIEC*SFTVVSFTQDQITYVIFNQIMEEIRAGF 289
+ ER SH + L ++FLC IE + F Q ++ FN I E +G
Sbjct: 286 IQEREDESHTLLQSKRLFQQFLCDAYTTIESNRLAYIKFNQSKLRCENFNSIKESASSGS 345
Query: 288 NGTSHRG 268
S G
Sbjct: 346 TTMSEEG 352
>At3g03750.2 68416.m00381 SET domain-containing protein low
similarity to G9a [Homo sapiens] GI:287865; contains
Pfam profiles PF00856: SET domain, PF05033: Pre-SET
motif
Length = 354
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 316 LIENHICYLVLCERNYSKRLAFNYLEEIAQE 408
L++ C CE Y K LAF +EEIA E
Sbjct: 139 LVDESGCECERCEEGYCKCLAFAGMEEIANE 169
>At3g03750.1 68416.m00380 SET domain-containing protein low
similarity to G9a [Homo sapiens] GI:287865; contains
Pfam profiles PF00856: SET domain, PF05033: Pre-SET
motif
Length = 338
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 316 LIENHICYLVLCERNYSKRLAFNYLEEIAQE 408
L++ C CE Y K LAF +EEIA E
Sbjct: 139 LVDESGCECERCEEGYCKCLAFAGMEEIANE 169
>At1g54830.3 68414.m06253 CCAAT-box binding transcription factor
Hap5a, putative similar to heme activated protein
GI:6289057 from (Arabidopsis thaliana) GI:14577940
CCAAT-binding protein subunit HAP5 {Hypocrea jecorina}
similar to Transcription factor GB:CAA74053 GI:2398533
from [Arabidopsis thaliana] similarity to transcription
factor Hap5a similar to transcription factor Hap5a
[Arabidopsis thaliana](GI:6523090)
Length = 217
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 790 SWNHLENPEESTITSTITAPAVTFTSI-DFVLRYV 689
SWNH E + T+ A AVT T I DF++ V
Sbjct: 112 SWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIV 146
>At1g54830.2 68414.m06252 CCAAT-box binding transcription factor
Hap5a, putative similar to heme activated protein
GI:6289057 from (Arabidopsis thaliana) GI:14577940
CCAAT-binding protein subunit HAP5 {Hypocrea jecorina}
similar to Transcription factor GB:CAA74053 GI:2398533
from [Arabidopsis thaliana] similarity to transcription
factor Hap5a similar to transcription factor Hap5a
[Arabidopsis thaliana](GI:6523090)
Length = 217
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 790 SWNHLENPEESTITSTITAPAVTFTSI-DFVLRYV 689
SWNH E + T+ A AVT T I DF++ V
Sbjct: 112 SWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIV 146
>At1g54830.1 68414.m06251 CCAAT-box binding transcription factor
Hap5a, putative similar to heme activated protein
GI:6289057 from (Arabidopsis thaliana) GI:14577940
CCAAT-binding protein subunit HAP5 {Hypocrea jecorina}
similar to Transcription factor GB:CAA74053 GI:2398533
from [Arabidopsis thaliana] similarity to transcription
factor Hap5a similar to transcription factor Hap5a
[Arabidopsis thaliana](GI:6523090)
Length = 217
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 790 SWNHLENPEESTITSTITAPAVTFTSI-DFVLRYV 689
SWNH E + T+ A AVT T I DF++ V
Sbjct: 112 SWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIV 146
>At1g08970.4 68414.m01000 CCAAT-box binding transcription factor
Hap5a, putative
Length = 231
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 790 SWNHLENPEESTITSTITAPAVTFTSI-DFVLRYV 689
SWNH E + T+ A AVT T I DF++ V
Sbjct: 122 SWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIV 156
>At1g08970.3 68414.m00999 CCAAT-box binding transcription factor
Hap5a, putative
Length = 231
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 790 SWNHLENPEESTITSTITAPAVTFTSI-DFVLRYV 689
SWNH E + T+ A AVT T I DF++ V
Sbjct: 122 SWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIV 156
>At1g08970.2 68414.m00998 CCAAT-box binding transcription factor
Hap5a, putative
Length = 231
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 790 SWNHLENPEESTITSTITAPAVTFTSI-DFVLRYV 689
SWNH E + T+ A AVT T I DF++ V
Sbjct: 122 SWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIV 156
>At1g08970.1 68414.m00997 CCAAT-box binding transcription factor
Hap5a, putative
Length = 231
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 790 SWNHLENPEESTITSTITAPAVTFTSI-DFVLRYV 689
SWNH E + T+ A AVT T I DF++ V
Sbjct: 122 SWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIV 156
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,281,353
Number of Sequences: 28952
Number of extensions: 278292
Number of successful extensions: 845
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2019160800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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