Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021111
         (830 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    23   3.9  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   9.1  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   9.1  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   9.1  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   9.1  

>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 628 SPESILLLAQHAHDNGHTFVM 690
           +P+S+ L AQ+A DN    VM
Sbjct: 327 NPKSVALKAQYAKDNNLAGVM 347


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 544 PDHLQKEECKK 576
           P+H  +E+CKK
Sbjct: 520 PEHADREKCKK 530


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 415 SNCRWSPRSISSIK*GSNWYMCSASNWYTPL 507
           +N + SP+S SS+  G+N +  + S  Y  L
Sbjct: 218 ANVKLSPKSASSLPPGNNIHGMAPSVMYPHL 248


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 415 SNCRWSPRSISSIK*GSNWYMCSASNWYTPL 507
           +N + SP+S SS+  G+N +  + S  Y  L
Sbjct: 166 ANVKLSPKSASSLPPGNNIHGMAPSVMYPHL 196


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 415 SNCRWSPRSISSIK*GSNWYMCSASNWYTPL 507
           +N + SP+S SS+  G+N +  + S  Y  L
Sbjct: 349 ANVKLSPKSASSLPPGNNIHGMAPSVMYPHL 379


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,503
Number of Sequences: 336
Number of extensions: 4689
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22829180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)