Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021110
(679 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g55990.1 68416.m06221 expressed protein contains Pfam profile... 31 0.53
At5g17910.1 68418.m02100 expressed protein 31 0.70
At3g15560.1 68416.m01972 expressed protein 31 0.70
At3g20150.1 68416.m02554 kinesin motor family protein contains P... 31 0.93
At1g11400.2 68414.m01310 expressed protein 30 1.2
At1g11400.1 68414.m01309 expressed protein 30 1.2
At5g60030.1 68418.m07527 expressed protein 29 2.8
At1g73370.1 68414.m08492 sucrose synthase, putative / sucrose-UD... 29 2.8
At5g27330.1 68418.m03263 expressed protein 28 4.9
At5g42880.1 68418.m05226 hypothetical protein contains Pfam prof... 28 6.5
At5g16780.1 68418.m01965 SART-1 family protein contains Pfam dom... 28 6.5
At3g06670.1 68416.m00786 expressed protein 28 6.5
At1g71150.1 68414.m08210 expressed protein ; expression support... 28 6.5
At5g65250.1 68418.m08208 expressed protein 27 8.6
At5g43500.2 68418.m05318 expressed protein 27 8.6
At5g43500.1 68418.m05319 expressed protein 27 8.6
At5g28350.2 68418.m03443 expressed protein 27 8.6
At5g28350.1 68418.m03442 expressed protein 27 8.6
At4g05170.1 68417.m00777 basic helix-loop-helix (bHLH) family pr... 27 8.6
At3g61480.1 68416.m06885 expressed protein 27 8.6
>At3g55990.1 68416.m06221 expressed protein contains Pfam profile
PF03005: Arabidopsis proteins of unknown function
Length = 487
Score = 31.5 bits (68), Expect = 0.53
Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +2
Query: 17 SEKPASSEDKDTPIRQIMTI-IEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKY 193
+ KP D+ TPI +I T+ ++ I+N + + + + +Q + K++ + V+K
Sbjct: 56 TSKPHDVHDEATPITEITTLPVQESIKNSDPIQESIKNADSVQDSVKDVAEPVQEEVSKT 115
Query: 194 DEVAQTLEFA 223
+EV + FA
Sbjct: 116 EEVKKIELFA 125
>At5g17910.1 68418.m02100 expressed protein
Length = 1342
Score = 31.1 bits (67), Expect = 0.70
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +2
Query: 59 RQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYDEVAQTLE 217
RQ+ + E K+ ++ +S T D +K E N+D++ +AK D V+ E
Sbjct: 524 RQLSEVSESKVSSIPDTESVCTVLEDDEKKVDENNADRETKIAKVDMVSDNDE 576
>At3g15560.1 68416.m01972 expressed protein
Length = 471
Score = 31.1 bits (67), Expect = 0.70
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Frame = +2
Query: 8 NAKSEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSD-QKVAV 184
N+KS+ +K I +++ ++HK LEK + DL+ KE N++ KV
Sbjct: 303 NSKSDPHDLQTEKSKKIDEMIEKLDHKFPFLEKVDEEEV---DLKLQAKEANNNTSKVDE 359
Query: 185 AKYDEVAQTLEFARDLSKQVTAIESLQSVRQKNKLKRKP 301
+ D Q E + SK ES + R LK P
Sbjct: 360 EEVDLQLQAKETNNNTSKVEIRTESSRRSRMSFDLKNTP 398
>At3g20150.1 68416.m02554 kinesin motor family protein contains Pfam
domain, PF00225: Kinesin motor domain
Length = 1114
Score = 30.7 bits (66), Expect = 0.93
Identities = 28/101 (27%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Frame = +2
Query: 5 ANAKSEKPASSEDKDTPIRQIM---TIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQK 175
A K EK +S E +D R ++ +EH L+++ + L S KA E ++ K
Sbjct: 923 AQLKQEKLSSEELEDALRRAVLGHARFVEH-YTELQEKYNDLCSKH---KATVEWITELK 978
Query: 176 VAVAKYDEVAQTLEFARDLSKQVTAIESLQSVRQKNKLKRK 298
AVAK + FA+ L+ +++A+ ++ R+++ LK++
Sbjct: 979 KAVAKAGKKGCGSRFAKSLASELSALR-VERERERDLLKKE 1018
>At1g11400.2 68414.m01310 expressed protein
Length = 204
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +2
Query: 77 IEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYDEVAQTLEFARD 229
+E +IR L K+K +LT + + A ++LN +Q +K +E Q L+ D
Sbjct: 152 VEKRIRAL-KKKIRLTEAQQQKTASRDLNPEQLEKFSKLEEWRQELKALED 201
>At1g11400.1 68414.m01309 expressed protein
Length = 204
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +2
Query: 77 IEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYDEVAQTLEFARD 229
+E +IR L K+K +LT + + A ++LN +Q +K +E Q L+ D
Sbjct: 152 VEKRIRAL-KKKIRLTEAQQQKTASRDLNPEQLEKFSKLEEWRQELKALED 201
>At5g60030.1 68418.m07527 expressed protein
Length = 292
Score = 29.1 bits (62), Expect = 2.8
Identities = 24/117 (20%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Frame = +2
Query: 14 KSEKPASSEDKDTPIRQIMTIIEHKIRNLE-----KRKSKLTSYRDLQKAGKELNSDQKV 178
+ +K +++D+D ++ +E + ++ + K+KSK + D+ ++L +QK
Sbjct: 152 EKKKKKNNKDEDVVDEKVKEKLEDEQKSADRKERKKKKSKKNNDEDVVDEKEKLEDEQKS 211
Query: 179 AVAKYDEVAQTLEFARDLSKQVTAIESLQSVRQKNKLKRKPG---FVMQQRPTK*KK 340
A K + + + + K+ E R+K K K++ V ++R +K K+
Sbjct: 212 AEIKEKKKNKDEDVVDEKEKEKLEDEQRSGERKKEKKKKRKSDEEIVSEERKSKKKR 268
>At1g73370.1 68414.m08492 sucrose synthase, putative / sucrose-UDP
glucosyltransferase, putative similar to sucrose
synthase GI:6682841 from [Citrus unshiu]
Length = 942
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +2
Query: 116 KLTSYRDLQKAGKELNSDQKVAVAKYDEVAQTLEFARDLSKQVTAIE 256
KL L +++N DQK A +Y E+ L+F + L+K+VT E
Sbjct: 766 KLLKMGSLYGFWRQVNEDQKKAKKRYIEMLYNLQF-KQLTKKVTIPE 811
>At5g27330.1 68418.m03263 expressed protein
Length = 628
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +2
Query: 41 DKDTPIRQIMTIIEHKIRNLEKRK---SKLTSYRDLQKAGKELNSDQ 172
D++T IR + IR LE + S++ RDL K+G +L S++
Sbjct: 141 DRETEIRDLKREANGLIRKLESEREEFSRVCDERDLVKSGFDLQSEE 187
>At5g42880.1 68418.m05226 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 751
Score = 27.9 bits (59), Expect = 6.5
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = +2
Query: 83 HKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVA-VAKYDEVAQTLEFARDLSKQV-TAIE 256
HKI+ +E+RK +Q+A E + ++A AKYD + + LE + L +++ +E
Sbjct: 159 HKIQTIERRKMVDEELEKIQEAMPEYKREAELAEEAKYDAL-EELENTKGLIEELKLELE 217
Query: 257 SLQSVRQKNK 286
+ Q+ K
Sbjct: 218 KAEKEEQQAK 227
>At5g16780.1 68418.m01965 SART-1 family protein contains Pfam
domain, PF03343: SART-1 family
Length = 820
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 92 RNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYDEVAQTLEFARDLS 235
RN++K+KSKL D GKE + K + +T EF R L+
Sbjct: 649 RNMDKKKSKLVGIVD-DDGGKESKDKESKDRFKDIRIERTDEFGRTLT 695
>At3g06670.1 68416.m00786 expressed protein
Length = 865
Score = 27.9 bits (59), Expect = 6.5
Identities = 19/75 (25%), Positives = 29/75 (38%)
Frame = +2
Query: 2 AANAKSEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVA 181
A+N + EKPAS+ K+ P + + + R L Y D + +K
Sbjct: 673 ASNTQKEKPASNIQKEQPKPHLSNGVAASPTSSSPRSGGLVDYEDDEDDEDYKPPPRKQP 732
Query: 182 VAKYDEVAQTLEFAR 226
A DE + L R
Sbjct: 733 EASEDEEGELLRLKR 747
>At1g71150.1 68414.m08210 expressed protein ; expression supported
by MPSS
Length = 351
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 5 ANAKSEKPASSEDKDTPIRQIMTIIEHKIRNLEKR 109
++ KS K +SSE R++ ++IEH + L+ R
Sbjct: 303 SDVKSSKNSSSEALSGSCRRLQSLIEHMVTELDTR 337
>At5g65250.1 68418.m08208 expressed protein
Length = 300
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 152 KELNSDQKVAVAKYDEVAQTLEFARDLSKQVTAIESLQSVRQKNKLKRK 298
KEL QKV +A ++ + LE ++K ES S +Q +RK
Sbjct: 237 KELGEIQKVLLAMQEQQRKQLELILTIAKSSKLFESSTSSKQSPSEQRK 285
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 343 LLILDCLMQMGSADARTDFINGTNGAATLTEDDLKILDDLYPE 471
+L LD GSA + I+G N A+T+ +D + D+Y +
Sbjct: 89 ILFLDESSSSGSASRKMGRIDGYNQASTIKKDSVFTWTDVYED 131
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 343 LLILDCLMQMGSADARTDFINGTNGAATLTEDDLKILDDLYPE 471
+L LD GSA + I+G N A+T+ +D + D+Y +
Sbjct: 101 ILFLDESSSSGSASRKMGRIDGYNQASTIKKDSVFTWTDVYED 143
>At5g28350.2 68418.m03443 expressed protein
Length = 1087
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -3
Query: 470 SGYKSSKIFKSSSVNVAAPFVPFMKSVLASALPICIRQSRISK 342
S +K S + KSSS +P V +KS+L S + +SK
Sbjct: 913 SSHKKSSLDKSSSFKEQSPHVASVKSILESHASYLMSGKELSK 955
>At5g28350.1 68418.m03442 expressed protein
Length = 1127
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -3
Query: 470 SGYKSSKIFKSSSVNVAAPFVPFMKSVLASALPICIRQSRISK 342
S +K S + KSSS +P V +KS+L S + +SK
Sbjct: 953 SSHKKSSLDKSSSFKEQSPHVASVKSILESHASYLMSGKELSK 995
>At4g05170.1 68417.m00777 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 296
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/36 (38%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
Frame = +2
Query: 71 TIIEHKIRNLEKRKSKLT-SYRDL-QKAGKELNSDQ 172
++++H+IRN + K ++T Y++L KA E NSD+
Sbjct: 115 SLLDHEIRNHKSSKEQITQDYKNLTSKAQLEENSDE 150
>At3g61480.1 68416.m06885 expressed protein
Length = 1091
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -3
Query: 470 SGYKSSKIFKSSSVNVAAPFVPFMKSVLASALPICIRQSRISK 342
S +K S + KSSS +P V +KS+L S + +SK
Sbjct: 918 SSHKKSSLDKSSSFKEQSPHVASVKSILESHASYLMSGKELSK 960
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,175,449
Number of Sequences: 28952
Number of extensions: 245050
Number of successful extensions: 706
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 706
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1428369392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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