Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021109
         (828 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   2.2  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    23   3.9  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   5.2  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   5.2  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   5.2  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +2

Query: 89  QIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVA 214
           QI  ++  K+R  +  K+   +Y+ +    KELN D K + A
Sbjct: 110 QIEALVPRKLRLADGGKTLEINYKLIDPDLKELNLDTKESYA 151


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 770 ICQLVLHFPPTGPLPVPP 823
           +C   L  P   PLP+PP
Sbjct: 170 LCNNYLPLPQVPPLPLPP 187


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = -2

Query: 749 LGSCTSSFYWNMTFFYFCDCTIYSFIKVS 663
           +G    S Y     F FCDC+  + + ++
Sbjct: 283 IGLLVDSTYCLFLLFVFCDCSHQASLNIA 311


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = -2

Query: 749 LGSCTSSFYWNMTFFYFCDCTIYSFIKVS 663
           +G    S Y     F FCDC+  + + ++
Sbjct: 283 IGLLVDSTYCLFLLFVFCDCSHQASLNIA 311


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = -2

Query: 749 LGSCTSSFYWNMTFFYFCDCTIYSFIKVS 663
           +G    S Y     F FCDC+  + + ++
Sbjct: 283 IGLLVDSTYCLFLLFVFCDCSHQASLNIA 311


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,355
Number of Sequences: 336
Number of extensions: 3598
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22725411
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)