Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021109
(828 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC117673-1|AAI17674.1| 905|Homo sapiens CAPRIN2 protein protein. 65 3e-10
BC117672-1|AAI17673.1| 960|Homo sapiens CAPRIN2 protein protein. 65 3e-10
AY074491-1|AAL71550.1| 278|Homo sapiens EEG1S protein. 65 3e-10
AY074490-1|AAL71549.1| 1077|Homo sapiens EEG1L protein. 65 3e-10
BC001731-1|AAH01731.2| 709|Homo sapiens cell cycle associated p... 64 4e-10
Z48042-1|CAA88096.1| 649|Homo sapiens GPI-anchored protein p137... 63 1e-09
BX537569-1|CAD97786.1| 173|Homo sapiens hypothetical protein pr... 63 1e-09
BC011885-1|AAH11885.1| 585|Homo sapiens eukaryotic translation ... 30 8.9
AK027356-1|BAB55058.1| 585|Homo sapiens protein ( Homo sapiens ... 30 8.9
AF497978-1|AAM83402.1| 585|Homo sapiens eukaryotic translation ... 30 8.9
AF212241-1|AAK14926.1| 609|Homo sapiens CDA02 protein. 30 8.9
>BC117673-1|AAI17674.1| 905|Homo sapiens CAPRIN2 protein protein.
Length = 905
Score = 65.3 bits (152), Expect = 3e-10
Identities = 32/69 (46%), Positives = 44/69 (63%)
Frame = +2
Query: 44 SEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYD 223
S + S+ +T I + ++HKIRN+EK+K KL Y+D K+G+ LN DQ AV KY+
Sbjct: 109 SSAASPSQAYETYIENGLICLKHKIRNIEKKKLKLEDYKDRLKSGEHLNPDQLEAVEKYE 168
Query: 224 EVAQTLEFA 250
EV LEFA
Sbjct: 169 EVLHNLEFA 177
Score = 38.7 bits (86), Expect = 0.025
Identities = 17/60 (28%), Positives = 35/60 (58%)
Frame = +3
Query: 549 QITRAAEHLYSIIDGKPKEVLGTTYLRIKEIVSTVHECGYFDKTVDGAITEVEESHVPVE 728
Q+ +++ + + +++G K V+GTTY +K+++S + GYF+ +E VP+E
Sbjct: 274 QMEQSSLYFWDLLEGSEKAVVGTTYKHLKDLLSKLLNSGYFESI--PVPKNAKEKEVPLE 331
>BC117672-1|AAI17673.1| 960|Homo sapiens CAPRIN2 protein protein.
Length = 960
Score = 65.3 bits (152), Expect = 3e-10
Identities = 32/69 (46%), Positives = 44/69 (63%)
Frame = +2
Query: 44 SEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYD 223
S + S+ +T I + ++HKIRN+EK+K KL Y+D K+G+ LN DQ AV KY+
Sbjct: 109 SSAASPSQAYETYIENGLICLKHKIRNIEKKKLKLEDYKDRLKSGEHLNPDQLEAVEKYE 168
Query: 224 EVAQTLEFA 250
EV LEFA
Sbjct: 169 EVLHNLEFA 177
Score = 38.7 bits (86), Expect = 0.025
Identities = 17/60 (28%), Positives = 35/60 (58%)
Frame = +3
Query: 549 QITRAAEHLYSIIDGKPKEVLGTTYLRIKEIVSTVHECGYFDKTVDGAITEVEESHVPVE 728
Q+ +++ + + +++G K V+GTTY +K+++S + GYF+ +E VP+E
Sbjct: 274 QMEQSSLYFWDLLEGSEKAVVGTTYKHLKDLLSKLLNSGYFESI--PVPKNAKEKEVPLE 331
>AY074491-1|AAL71550.1| 278|Homo sapiens EEG1S protein.
Length = 278
Score = 65.3 bits (152), Expect = 3e-10
Identities = 32/69 (46%), Positives = 44/69 (63%)
Frame = +2
Query: 44 SEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYD 223
S + S+ +T I + ++HKIRN+EK+K KL Y+D K+G+ LN DQ AV KY+
Sbjct: 109 SSAASPSQAYETYIENGLICLKHKIRNIEKKKLKLEDYKDRLKSGEHLNPDQLEAVEKYE 168
Query: 224 EVAQTLEFA 250
EV LEFA
Sbjct: 169 EVLHNLEFA 177
>AY074490-1|AAL71549.1| 1077|Homo sapiens EEG1L protein.
Length = 1077
Score = 65.3 bits (152), Expect = 3e-10
Identities = 32/69 (46%), Positives = 44/69 (63%)
Frame = +2
Query: 44 SEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYD 223
S + S+ +T I + ++HKIRN+EK+K KL Y+D K+G+ LN DQ AV KY+
Sbjct: 109 SSAASPSQAYETYIENGLICLKHKIRNIEKKKLKLEDYKDRLKSGEHLNPDQLEAVEKYE 168
Query: 224 EVAQTLEFA 250
EV LEFA
Sbjct: 169 EVLHNLEFA 177
Score = 38.7 bits (86), Expect = 0.025
Identities = 17/60 (28%), Positives = 35/60 (58%)
Frame = +3
Query: 549 QITRAAEHLYSIIDGKPKEVLGTTYLRIKEIVSTVHECGYFDKTVDGAITEVEESHVPVE 728
Q+ +++ + + +++G K V+GTTY +K+++S + GYF+ +E VP+E
Sbjct: 274 QMEQSSLYFWDLLEGSEKAVVGTTYKHLKDLLSKLLNSGYFESI--PVPKNAKEKEVPLE 331
>BC001731-1|AAH01731.2| 709|Homo sapiens cell cycle associated
protein 1 protein.
Length = 709
Score = 64.5 bits (150), Expect = 4e-10
Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Frame = +2
Query: 29 AANAKSEKPASSED--KDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQK 202
AA S+ PA+ + ++QI+ +I+ K+RNLEK+K KL Y++ G+ LN DQ
Sbjct: 34 AAAPASQHPATGTGAVQTEAMKQILGVIDKKLRNLEKKKGKLDDYQERMNKGERLNQDQL 93
Query: 203 VAVAKYDEVAQTLEFA 250
AV+KY EV LEFA
Sbjct: 94 DAVSKYQEVTNNLEFA 109
Score = 47.6 bits (108), Expect = 5e-05
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +3
Query: 549 QITRAAEHLYSIIDGKPKEVLGTTYLRIKEIVSTVHECGYFDKT---VDGAITEVEESHV 719
Q A+ HL+ +++GK K V GTTY +KEIV V + YFD T +G E E +
Sbjct: 206 QYEHASIHLWDLLEGKEKPVCGTTYKVLKEIVERVFQSNYFDSTHNHQNGLCEEEEAASA 265
Query: 720 P 722
P
Sbjct: 266 P 266
Score = 44.8 bits (101), Expect = 4e-04
Identities = 22/59 (37%), Positives = 34/59 (57%)
Frame = +1
Query: 331 VRYAAETNKIKEVLLILDCLMQMGSADARTDFINGTNGAAKLTEDDLKILDDLYPEVTP 507
+R AE ++K VL + L ++G + RTD G NG L+E++L +LD+ Y V P
Sbjct: 137 MREEAEQKRLKTVLELQYVLDKLGDDEVRTDLKQGLNGVPILSEEELSLLDEFYKLVDP 195
>Z48042-1|CAA88096.1| 649|Homo sapiens GPI-anchored protein p137
protein.
Length = 649
Score = 62.9 bits (146), Expect = 1e-09
Identities = 28/56 (50%), Positives = 39/56 (69%)
Frame = +2
Query: 83 IRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYDEVAQTLEFA 250
++QI+ +I+ K+RNLEK+K KL Y++ G+ LN DQ AV+KY EV LEFA
Sbjct: 1 MKQILGVIDKKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFA 56
Score = 47.2 bits (107), Expect = 7e-05
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +3
Query: 549 QITRAAEHLYSIIDGKPKEVLGTTYLRIKEIVSTVHECGYFDKT 680
Q A+ HL+ +++GK K V GTTY +KEIV V + YFD T
Sbjct: 153 QYEHASIHLWDLLEGKEKPVCGTTYKVLKEIVERVFQSNYFDST 196
Score = 44.8 bits (101), Expect = 4e-04
Identities = 22/59 (37%), Positives = 34/59 (57%)
Frame = +1
Query: 331 VRYAAETNKIKEVLLILDCLMQMGSADARTDFINGTNGAAKLTEDDLKILDDLYPEVTP 507
+R AE ++K VL + L ++G + RTD G NG L+E++L +LD+ Y V P
Sbjct: 84 MREEAEQKRLKTVLELQYVLDKLGDDEVRTDLKQGLNGVPILSEEELSLLDEFYKLVDP 142
>BX537569-1|CAD97786.1| 173|Homo sapiens hypothetical protein
protein.
Length = 173
Score = 62.9 bits (146), Expect = 1e-09
Identities = 31/69 (44%), Positives = 43/69 (62%)
Frame = +2
Query: 44 SEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYD 223
S + S+ + I + ++HKIRN+EK+K KL Y+D K+G+ LN DQ AV KY+
Sbjct: 74 SSAASPSQAYEAYIENGLICLKHKIRNIEKKKLKLEDYKDHLKSGEHLNPDQLEAVEKYE 133
Query: 224 EVAQTLEFA 250
EV LEFA
Sbjct: 134 EVLHNLEFA 142
>BC011885-1|AAH11885.1| 585|Homo sapiens eukaryotic translation
initiation factor 2A, 65kDa protein.
Length = 585
Score = 30.3 bits (65), Expect = 8.9
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 104 IEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYDEVAQTLE 244
I+ KI+NL+K+ + ++ GK+L +Q + K + Q LE
Sbjct: 533 IDKKIKNLKKKLKAIEQLKEQAATGKQLEKNQLEKIQKETALLQELE 579
>AK027356-1|BAB55058.1| 585|Homo sapiens protein ( Homo sapiens
cDNA FLJ14450 fis, clone HEMBB1001736, weakly similar to
EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 9. ).
Length = 585
Score = 30.3 bits (65), Expect = 8.9
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 104 IEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYDEVAQTLE 244
I+ KI+NL+K+ + ++ GK+L +Q + K + Q LE
Sbjct: 533 IDKKIKNLKKKLKAIEQLKEQAATGKQLEKNQLEKIQKETALLQELE 579
>AF497978-1|AAM83402.1| 585|Homo sapiens eukaryotic translation
initiation factor 2A protein.
Length = 585
Score = 30.3 bits (65), Expect = 8.9
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 104 IEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYDEVAQTLE 244
I+ KI+NL+K+ + ++ GK+L +Q + K + Q LE
Sbjct: 533 IDKKIKNLKKKLKAIEQLKEQAATGKQLEKNQLEKIQKETALLQELE 579
>AF212241-1|AAK14926.1| 609|Homo sapiens CDA02 protein.
Length = 609
Score = 30.3 bits (65), Expect = 8.9
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 104 IEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYDEVAQTLE 244
I+ KI+NL+K+ + ++ GK+L +Q + K + Q LE
Sbjct: 557 IDKKIKNLKKKLKAIEQLKEQAATGKQLEKNQLEKIQKETALLQELE 603
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,079,473
Number of Sequences: 237096
Number of extensions: 1978278
Number of successful extensions: 7875
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 7671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7870
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10370898348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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