Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021108
(851 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 23 3.6
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 23 3.6
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 23 3.6
DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein ... 23 4.7
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 23 4.7
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 23 4.7
AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein ... 23 4.7
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 22 8.2
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 22 8.2
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 22 8.2
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 22 8.2
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 22 8.2
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/23 (30%), Positives = 15/23 (65%)
Frame = +2
Query: 566 EMENFGGQDQIQKHRLLANMYLL 634
++ ++ G++ + H+LL N Y L
Sbjct: 250 DLPDYRGEEYLYSHKLLLNRYYL 272
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/23 (30%), Positives = 15/23 (65%)
Frame = +2
Query: 566 EMENFGGQDQIQKHRLLANMYLL 634
++ ++ G++ + H+LL N Y L
Sbjct: 250 DLPDYRGEEYLYSHKLLLNRYYL 272
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 23.0 bits (47), Expect = 3.6
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 821 SSNYKESTWINVNYSSLIKICAGITSLMTF 732
SSN V YS L ++C I+S M +
Sbjct: 87 SSNASVEPDSKVTYSGLWRVCVAISSRMEY 116
>DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein 1
protein.
Length = 116
Score = 22.6 bits (46), Expect = 4.7
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +3
Query: 519 CSACTQTQSENCRAQAKW 572
C CT+ Q +N A+W
Sbjct: 75 CKKCTEIQKQNLDKLAEW 92
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 22.6 bits (46), Expect = 4.7
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 627 ICWWCNSPTESSYCSRVTATL*KDYPRDL 713
IC+ C T +S R+ L DY RD+
Sbjct: 24 ICFVCKDITSTSALYRLKLYLFCDYDRDI 52
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 22.6 bits (46), Expect = 4.7
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -3
Query: 114 ILIHLPYHNCVRWFSRIHSFLKSPAF 37
I+ HL H V W+S+ +F P +
Sbjct: 173 IVFHLETHPNVTWYSQCVTFNAFPTY 198
>AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein
protein.
Length = 116
Score = 22.6 bits (46), Expect = 4.7
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +3
Query: 519 CSACTQTQSENCRAQAKW 572
C CT+ Q +N A+W
Sbjct: 75 CKKCTEIQKQNLDKLAEW 92
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 8.2
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 821 SSNYKESTWINVNYSSLIKI 762
++NYK+ + N+NY I I
Sbjct: 104 NNNYKKLQYYNINYIEQIPI 123
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 8.2
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 821 SSNYKESTWINVNYSSLIKI 762
++NYK+ + N+NY I I
Sbjct: 104 NNNYKKLQYYNINYIEQIPI 123
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 8.2
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 821 SSNYKESTWINVNYSSLIKI 762
++NYK+ + N+NY I I
Sbjct: 104 NNNYKKLQYYNINYIEQIPI 123
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 8.2
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 821 SSNYKESTWINVNYSSLIKI 762
++NYK+ + N+NY I I
Sbjct: 104 NNNYKKLQYYNINYIEQIPI 123
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 21.8 bits (44), Expect = 8.2
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -3
Query: 480 PNIKPWSPAPTSSSFLFSCTPAAMFGDCWSSASITLH 370
PN++P S +++ P M D W+S + LH
Sbjct: 57 PNVRPISSHQIANNVTMQLLPKLMEFDDWTSV-MELH 92
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 253,145
Number of Sequences: 438
Number of extensions: 5546
Number of successful extensions: 35
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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