Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021106X
(349 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0671 + 26608953-26609671,26609775-26610495 32 0.11
09_02_0113 + 4408171-4409415,4409902-4409907 30 0.57
01_06_0334 - 28531499-28531810 29 0.76
10_03_0040 - 7307108-7307564,7307611-7307915 29 1.0
09_02_0042 - 3402424-3402534,3403242-3403345,3403448-3403562,340... 29 1.0
12_02_1193 + 26891619-26892456,26892545-26893884 29 1.3
06_03_0188 - 17691582-17692241 29 1.3
03_02_0257 + 6907997-6908504,6909316-6909348,6910163-6910308 29 1.3
07_03_1444 - 26578007-26578117,26578370-26578474,26578971-265790... 28 1.8
03_02_0845 - 11700830-11701327 28 1.8
01_06_1132 - 34769800-34769955,34770098-34770157,34770259-347703... 28 1.8
01_06_0791 - 32026086-32026944,32027044-32027600,32027686-320279... 28 1.8
01_01_0484 - 3558941-3559303,3559439-3559560,3560596-3560743,356... 28 1.8
04_03_0052 + 10257109-10257337,10257580-10257668,10257708-102582... 28 2.3
05_01_0121 - 833885-833949,834180-834430,834545-834604,834893-83... 27 3.1
12_02_0964 - 24860373-24860381,24860427-24860768,24861436-248615... 27 4.0
06_03_0184 - 17648215-17648330,17648706-17648739,17648901-176490... 27 4.0
05_04_0235 + 19291204-19291769,19291860-19292250 27 4.0
04_01_0578 + 7507204-7507436,7509588-7509618,7509634-7509774,750... 27 4.0
01_07_0362 + 43063345-43063420,43064176-43064244,43064348-430644... 27 4.0
01_06_0044 - 25922298-25923434 27 4.0
11_01_0387 + 2922208-2922704,2922956-2923088,2923487-2923549,292... 27 5.3
10_08_1043 + 22524322-22524346,22524931-22525028,22525287-225253... 27 5.3
09_04_0350 + 16899076-16900164 27 5.3
07_01_0214 + 1595917-1596526,1597127-1597140,1598414-1598743,159... 27 5.3
06_01_1097 + 8996985-8997635 27 5.3
04_04_0069 + 22506885-22508354 27 5.3
03_06_0048 - 31274899-31277193 27 5.3
02_01_0434 + 3158637-3159319,3159460-3159576,3160064-3160226,316... 27 5.3
01_01_0470 - 3464634-3466520 27 5.3
12_02_0472 - 19469512-19469541,19469755-19469785,19469975-19471356 26 7.1
10_08_0052 - 14491990-14493108 26 7.1
09_03_0006 + 11426346-11426420,11426733-11427452 26 7.1
06_03_0836 - 25249491-25249511,25249883-25250050,25250721-252509... 26 7.1
05_02_0004 - 5528713-5528718,5529039-5529390,5529802-5530339,553... 26 7.1
03_05_0907 + 28678909-28679253 26 7.1
03_05_0366 - 23505755-23506441 26 7.1
01_05_0278 - 20313373-20313387,20314617-20315240 26 7.1
01_01_0454 + 3375593-3376105 26 7.1
12_01_0158 - 1199788-1200590,1200724-1200856 26 9.3
11_06_0002 + 19154489-19155172,19155260-19155298 26 9.3
10_02_0175 - 6207485-6207898 26 9.3
09_04_0376 + 17077737-17078447 26 9.3
09_03_0061 - 11967727-11967765,11967872-11967910,11967996-119682... 26 9.3
07_03_0363 + 17225472-17226778,17226910-17226917,17227313-172274... 26 9.3
04_03_0700 - 18836757-18837329 26 9.3
04_01_0568 - 7279478-7279590,7279749-7279988,7280078-7280141,728... 26 9.3
02_05_0243 - 27124559-27124864,27126922-27126990,27127741-271279... 26 9.3
>03_05_0671 + 26608953-26609671,26609775-26610495
Length = 479
Score = 32.3 bits (70), Expect = 0.11
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = -2
Query: 210 HLRQAEVARSLSGSALSGPADHFNGSHVRCSFEVH 106
++R+ E A +++ ALS P DHFNG + + + VH
Sbjct: 198 YVREGEAAGTVADMALSFPYDHFNGVYWQGALYVH 232
>09_02_0113 + 4408171-4409415,4409902-4409907
Length = 416
Score = 29.9 bits (64), Expect = 0.57
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 182 LRATSACRRWHPAPAPCSAGLP 247
LRA AC RW A A C+ G P
Sbjct: 44 LRAALACHRWRRAAARCAKGAP 65
>01_06_0334 - 28531499-28531810
Length = 103
Score = 29.5 bits (63), Expect = 0.76
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 152 AGPDRADPLKLRATSACRRWHPAPA-PCSAGLPWRRVAEGALQR-IQNPDL 298
A + DPL LR +A W AP+ C AGL R + L R +NPDL
Sbjct: 33 AAATKCDPLALRPCAAAILWGEAPSTACCAGL---RAQKRCLCRYAKNPDL 80
>10_03_0040 - 7307108-7307564,7307611-7307915
Length = 253
Score = 29.1 bits (62), Expect = 1.0
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = -2
Query: 273 SAPSATRRHGSPAEHGAGAGCHLRQAEVARSLSGSALSGPA 151
S +ATRR GS G GAG R+ AR SG S A
Sbjct: 27 SGQAATRRCGSAGRGGYGAGAARRRPGKARRNSGDPPSAAA 67
>09_02_0042 -
3402424-3402534,3403242-3403345,3403448-3403562,
3404344-3404391,3404519-3404608,3404819-3404893,
3405001-3405153,3405695-3405779,3408051-3408121,
3408243-3408293,3409037-3409453,3409529-3409660,
3409779-3409892,3411113-3411179,3411264-3411397,
3411486-3411701,3412627-3413418
Length = 924
Score = 29.1 bits (62), Expect = 1.0
Identities = 14/55 (25%), Positives = 23/55 (41%)
Frame = +3
Query: 174 HSSSGQPQPVAGGIRHQRRAQLDSRGAESLRGHFKGYKIQTWTDAEEDRVKRSLW 338
HS+ P AG H+RR+ AE++ H GY + +++ W
Sbjct: 104 HSAEAMAVPAAGQEGHRRRSGRGKHSAEAMAVHGVGYHKYAMLRRRQIQIETEAW 158
>12_02_1193 + 26891619-26892456,26892545-26893884
Length = 725
Score = 28.7 bits (61), Expect = 1.3
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = -3
Query: 272 VPPQRLGATGVQLSTALVPDATCDRLRLPGA*VGRPYPDQPITS 141
+PP LGA GV STA A+ +R+ A V P QP+ S
Sbjct: 560 IPP--LGAAGVDGSTAAGASASAERIVTAAAKVFGSPPHQPVAS 601
>06_03_0188 - 17691582-17692241
Length = 219
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 194 SACRRWHPAPAPCSAGLPWRRVAEGALQRIQNPDLDRRRGGPG 322
S C++WH P P SA W + +L+R + + RR G
Sbjct: 167 SLCQQWHTTPRPPSAHSAWSLL---SLRRYEREETRSRRRNQG 206
>03_02_0257 + 6907997-6908504,6909316-6909348,6910163-6910308
Length = 228
Score = 28.7 bits (61), Expect = 1.3
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = -2
Query: 264 SATRRHGSPAEHGAG--AGCHLRQAEVARSLSGSALSG 157
SAT R G PA G G AGC RQ ++ SG
Sbjct: 42 SATARRGRPARRGGGGVAGCPRRQRQLGSGAPAQPGSG 79
>07_03_1444 -
26578007-26578117,26578370-26578474,26578971-26579030,
26579122-26579233,26579390-26579716,26579814-26579860
Length = 253
Score = 28.3 bits (60), Expect = 1.8
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -1
Query: 88 CRAGRWGCWSPGVRFAASPGPGALPR 11
C AG+ WS GV+ AA G G LP+
Sbjct: 6 CLAGKAISWSSGVKAAAGCGLGLLPQ 31
>03_02_0845 - 11700830-11701327
Length = 165
Score = 28.3 bits (60), Expect = 1.8
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +2
Query: 167 ADPLKLRATSACRRWHPAPAPCSAGLPWRRVAEGALQRIQNPDLDRRRG 313
A+ +K A RRWH P C G +A A + + +P +RRRG
Sbjct: 67 AEEIKAAYRRAARRWH--PDACPGGAERFMLAREAYEVLSDP--ERRRG 111
>01_06_1132 -
34769800-34769955,34770098-34770157,34770259-34770334,
34770412-34770533,34770634-34770708,34770899-34771025,
34771126-34771214,34773479-34773535,34773584-34773661
Length = 279
Score = 28.3 bits (60), Expect = 1.8
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 55 LGTNTPTFQPYKIKVTAVNFKGTSNVTPIEVIGWSG*GRPT 177
+G T T KV++ FKG N++P++ + W+ G T
Sbjct: 39 VGVKTVTVYDITQKVSSHCFKGYDNISPMKKVEWNNRGFST 79
>01_06_0791 -
32026086-32026944,32027044-32027600,32027686-32027903,
32028171-32028261
Length = 574
Score = 28.3 bits (60), Expect = 1.8
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -3
Query: 143 SMGVTFDVPLKFTAVTLIL*GWKVGVLVPRCSVCCQSRTWCSSQG 9
S+GV F V + GWKVG+ VP C + + ++ G
Sbjct: 190 SIGVAFMVAVTVVVYVQDNLGWKVGLAVPTCLMLLSAASFLLGSG 234
>01_01_0484 -
3558941-3559303,3559439-3559560,3560596-3560743,
3560853-3561491,3562154-3562450,3562553-3563407,
3564363-3564545,3565041-3565118,3565762-3565974,
3566075-3566238,3566357-3566445,3566761-3566891,
3566980-3567148,3567255-3567327,3567525-3567606,
3567677-3567808,3568743-3568818,3568965-3569065,
3569446-3569636,3569738-3569912,3570604-3570854,
3571327-3571603,3572184-3572267,3572496-3573206
Length = 1867
Score = 28.3 bits (60), Expect = 1.8
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +3
Query: 33 GLAANRTPGDQHPHLPALQDQGDG--GELQRNIER 131
G AA+R P HP + AL DG ELQR R
Sbjct: 133 GSAASRFPPHDHPFVQALASGADGARAELQRQAAR 167
>04_03_0052 +
10257109-10257337,10257580-10257668,10257708-10258289,
10258477-10258668,10259392-10259563,10260190-10260461,
10260682-10260801,10260912-10260968,10261631-10261831,
10262451-10262511,10262712-10263013
Length = 758
Score = 27.9 bits (59), Expect = 2.3
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +3
Query: 15 GRAPGPGLAANRTPGDQHPHLPALQDQGDGGELQRNIE-RDSH*SDRLVR 161
G A GP + R PG +P L L+ G EL + R H + RL++
Sbjct: 76 GAALGPANESGRIPGQPNPLLKMLRRSRRGEELATTVTLRKHHLTTRLMK 125
>05_01_0121 -
833885-833949,834180-834430,834545-834604,834893-834926,
835746-835805,836409-836509,836939-837039,837209-837289,
837580-837650,837738-837849,838138-838173,838865-838951,
839055-839396
Length = 466
Score = 27.5 bits (58), Expect = 3.1
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 7/54 (12%)
Frame = +2
Query: 182 LRATSACRRWHPAPA-PCSAGLP---W---RRVAEGALQRIQNPDLDRRRGGPG 322
L A++A R HP+PA +AG P W R G+ + +PDL GPG
Sbjct: 14 LAASAAAARRHPSPASSAAAGEPVYLWPLPRNFTSGSRTLLVDPDLALDGQGPG 67
>12_02_0964 -
24860373-24860381,24860427-24860768,24861436-24861583,
24862070-24862089
Length = 172
Score = 27.1 bits (57), Expect = 4.0
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = -2
Query: 267 PSATRRHGSPAEHGAGAGCHLRQAEVARSLSGSALSGPADHFN 139
P R G+ E AG G + RS SGSA P H +
Sbjct: 82 PEKARFAGARPEAAAGGGSRGTARRILRSASGSATPLPPHHLH 124
>06_03_0184 -
17648215-17648330,17648706-17648739,17648901-17649094,
17649273-17649369
Length = 146
Score = 27.1 bits (57), Expect = 4.0
Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +2
Query: 164 RADPLKLRATSACRRWHP-APAPCSAGLPWRRVAEGALQRIQNPDL 298
R DP + W P AP PCS V GAL+R+ + +
Sbjct: 3 RVDPSRAVPMDMATEWIPTAPTPCSKAALAGMVFFGALERLASSSI 48
>05_04_0235 + 19291204-19291769,19291860-19292250
Length = 318
Score = 27.1 bits (57), Expect = 4.0
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -3
Query: 71 GVLVPRCSVCCQSRTWCSS 15
G L P C +CC S WC S
Sbjct: 16 GALCPNC-LCCSSYGWCGS 33
>04_01_0578 +
7507204-7507436,7509588-7509618,7509634-7509774,
7509883-7509972,7511382-7511401,7512111-7512202,
7512790-7512858,7513400-7513560
Length = 278
Score = 27.1 bits (57), Expect = 4.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 4 GQPWEEHQVRDWQQTEHLGTNTPT 75
G+ + Q+RD + T +GT TPT
Sbjct: 89 GEQMRDEQLRDGEVTAEIGTTTPT 112
>01_07_0362 +
43063345-43063420,43064176-43064244,43064348-43064454,
43064561-43064608
Length = 99
Score = 27.1 bits (57), Expect = 4.0
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 44 CCQSRTWCSSQGCP 3
CC + TWCSSQ P
Sbjct: 4 CCPTSTWCSSQRGP 17
>01_06_0044 - 25922298-25923434
Length = 378
Score = 27.1 bits (57), Expect = 4.0
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -3
Query: 272 VPPQRLGATGVQLSTALVPDAT 207
VPP GA + S ALVP AT
Sbjct: 87 VPPDTAGAASIATSLALVPPAT 108
>11_01_0387 +
2922208-2922704,2922956-2923088,2923487-2923549,
2923564-2923680,2925040-2925399
Length = 389
Score = 26.6 bits (56), Expect = 5.3
Identities = 18/72 (25%), Positives = 27/72 (37%)
Frame = +3
Query: 39 AANRTPGDQHPHLPALQDQGDGGELQRNIERDSH*SDRLVRIGPTHSSSGQPQPVAGGIR 218
A++ TP P LP + GG R++ D+ D L G GG
Sbjct: 61 ASDPTPPPPPPALPQAAPRPPGGAHLRSLSLDAAFFDGLAFQGGGGGGGAGSGSSGGGAG 120
Query: 219 HQRRAQLDSRGA 254
H+R +D +
Sbjct: 121 HKRSGSMDGESS 132
>10_08_1043 +
22524322-22524346,22524931-22525028,22525287-22525384,
22525878-22525935,22526642-22526743,22526840-22526901,
22527441-22527519,22527669-22527788,22527869-22527982,
22528749-22528883
Length = 296
Score = 26.6 bits (56), Expect = 5.3
Identities = 17/39 (43%), Positives = 18/39 (46%)
Frame = +2
Query: 149 SAGPDRADPLKLRATSACRRWHPAPAPCSAGLPWRRVAE 265
S G DR DPL WHPAP SA RR+ E
Sbjct: 159 SGGRDRPDPLT-------GEWHPAPFDASAVDNMRRLLE 190
>09_04_0350 + 16899076-16900164
Length = 362
Score = 26.6 bits (56), Expect = 5.3
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
Frame = -2
Query: 264 SATRRHGSPAE--HGAGAGC--HLRQAEVARSLSGSALSGPADHFNG 136
S+ RRHG P G G GC R V S +G A G AD G
Sbjct: 277 SSHRRHGGPGRLAEGVGDGCIWPTRHRLVEGSETGLAQRGAADGSGG 323
>07_01_0214 +
1595917-1596526,1597127-1597140,1598414-1598743,
1598853-1598963,1599113-1599269,1603366-1603619,
1603762-1603960,1604341-1604498
Length = 610
Score = 26.6 bits (56), Expect = 5.3
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 168 PTHSSSGQPQPVAGGIRHQRRAQLDSRGAESLRGHFKG 281
P+ + GQP P+AG + Q R RG R KG
Sbjct: 102 PSSTRFGQPDPLAGRLGRQIRKPSLMRGGTGRRWREKG 139
>06_01_1097 + 8996985-8997635
Length = 216
Score = 26.6 bits (56), Expect = 5.3
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +2
Query: 179 KLRATSACRRWHPAPAPCSAGLPWRRVAEGALQRIQNPDLDRRRGGPG 322
+LR T+ RR A WR V+ G +R Q L RRG G
Sbjct: 148 RLRRTAGGRRRRRPRMRRGAAPSWRSVSRGCGRRRQRGTLPSRRGQGG 195
>04_04_0069 + 22506885-22508354
Length = 489
Score = 26.6 bits (56), Expect = 5.3
Identities = 19/47 (40%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
Frame = -2
Query: 264 SATRRHGSPAE--HGAGAGC--HLRQAEVARSLSGSALSGPADHFNG 136
S RRHG P G G GC R V S +G A G AD G
Sbjct: 301 SGHRRHGGPGRLAEGVGDGCIWPTRHVLVEGSETGLAQRGAADGSGG 347
>03_06_0048 - 31274899-31277193
Length = 764
Score = 26.6 bits (56), Expect = 5.3
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = +1
Query: 103 AVNFKGTS-NVTPIEVIG-WSG*GRPTQAPGNLSLSQVASGTSAVLSWT-PVAPSR*GGT 273
++ F GT + P V+ +S G T PG L +A G + + +W+ V PS G
Sbjct: 474 SIVFAGTQVGIQPSPVVAAFSSRGPNTVTPGILKPDLIAPGVNILAAWSGSVGPSGLAGD 533
Query: 274 SK 279
S+
Sbjct: 534 SR 535
>02_01_0434 +
3158637-3159319,3159460-3159576,3160064-3160226,
3160394-3160600
Length = 389
Score = 26.6 bits (56), Expect = 5.3
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +2
Query: 179 KLRATSACRRWHPAPAPCSAGLPWRRVAEGALQRIQNPDLDRRRG 313
++ +A R W PAPA +AG P VA + + RRRG
Sbjct: 130 RVGVAAAVRGWRPAPA--TAGPPRMLVAAAPCGMLHPAAVARRRG 172
>01_01_0470 - 3464634-3466520
Length = 628
Score = 26.6 bits (56), Expect = 5.3
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = -3
Query: 269 PPQRLGATGVQLSTALVPDATCDRLRLPGA*VGRPYPDQPITSMGVTFDVPLKFTAVTL 93
PP + L A + D+ RLR P + P PD P+ ++ P +A+++
Sbjct: 4 PPPSAARVALYLRRARLIDSLRLRLRSPSSPPPPPPPDDPVVALHAIRAAPTPASAISV 62
>12_02_0472 - 19469512-19469541,19469755-19469785,19469975-19471356
Length = 480
Score = 26.2 bits (55), Expect = 7.1
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -2
Query: 246 GSPAEHGAGAGCHLRQAEVAR--SLSGSALSGPADHF 142
GS + G G+G HLR + R S+ G+A +G F
Sbjct: 368 GSSSGGGGGSGFHLRMRSLRRRGSIGGTAAAGGGGGF 404
>10_08_0052 - 14491990-14493108
Length = 372
Score = 26.2 bits (55), Expect = 7.1
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 51 TPGDQHPHLPALQDQGDGGEL 113
TP D H HL L + GDG ++
Sbjct: 178 TPPDLHRHLGGLLESGDGADV 198
>09_03_0006 + 11426346-11426420,11426733-11427452
Length = 264
Score = 26.2 bits (55), Expect = 7.1
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = -1
Query: 331 DLLTRSSSASVQVWILYPLKCPLSDSAPRESS*ARRWCRMPPATG*GCPELEWVGPIRTS 152
DL + S+S V + + +CP S + A RW R PP+T P E + TS
Sbjct: 98 DLCSDSASPPV-LRLAVGHRCPDSSAPSPPQPGALRWHRRPPSTALP-PHGETAPLVSTS 155
Query: 151 RSLQW 137
S W
Sbjct: 156 WSAMW 160
>06_03_0836 -
25249491-25249511,25249883-25250050,25250721-25250920,
25251000-25251324,25251981-25252045,25252231-25252552,
25252650-25252730
Length = 393
Score = 26.2 bits (55), Expect = 7.1
Identities = 12/50 (24%), Positives = 22/50 (44%)
Frame = -2
Query: 243 SPAEHGAGAGCHLRQAEVARSLSGSALSGPADHFNGSHVRCSFEVHRRHL 94
+P + A G + + R + G+ L GP S + E H++H+
Sbjct: 261 APQQSAAKVGVSPVKRKRTRRIEGTCLEGPNRKSRASPISVKVEPHKKHV 310
>05_02_0004 -
5528713-5528718,5529039-5529390,5529802-5530339,
5530354-5531731,5531895-5532015,5534226-5534545
Length = 904
Score = 26.2 bits (55), Expect = 7.1
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +2
Query: 185 RATSACRRWHPAPAPCSAGLPWRRVAEGALQRIQNPDLDRRR 310
R T C RW P GLP E LQ L +RR
Sbjct: 367 RHTFKCNRWRKPSDPKEKGLPEVDEVESCLQTNTTSPLVKRR 408
>03_05_0907 + 28678909-28679253
Length = 114
Score = 26.2 bits (55), Expect = 7.1
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -2
Query: 264 SATRRHGSPAEHGAGAGCHLRQAEVARSLSGSALSGPA 151
SA +G+ A AGAG LR+ VAR + ++G A
Sbjct: 59 SAAAANGASAPGNAGAGSVLRRRPVARRVLLRGVNGEA 96
>03_05_0366 - 23505755-23506441
Length = 228
Score = 26.2 bits (55), Expect = 7.1
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 188 ATSACRRWHPAPAPCSAGLPWRRVAEGALQR 280
+T RRW P P P +G + A GAL R
Sbjct: 44 STGDGRRWLPRPPPRCSGSGLEQEAGGALSR 74
>01_05_0278 - 20313373-20313387,20314617-20315240
Length = 212
Score = 26.2 bits (55), Expect = 7.1
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -2
Query: 273 SAPSATRRHGSPAEHGAGAGCHLRQAEVARSLSGSALSGPADHF 142
+APSA+ H P G G + A+ R+L AL+G A+ F
Sbjct: 19 NAPSASAMHHPPHPAAGGGGPVMPYADADRTL--RALAGAAEGF 60
>01_01_0454 + 3375593-3376105
Length = 170
Score = 26.2 bits (55), Expect = 7.1
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -2
Query: 273 SAPSATRRHGSPAEHGAGAGCHLRQAEVARSLSGSALSGPA 151
S P A RR S GAG G H+R +++ L PA
Sbjct: 87 SVPDAKRRT-STGGGGAGRGHHVRSKSEGSAVAADRLGSPA 126
>12_01_0158 - 1199788-1200590,1200724-1200856
Length = 311
Score = 25.8 bits (54), Expect = 9.3
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -2
Query: 189 ARSLSGSALSGPADHFNGSHVRCSFEVHRRH 97
A + G+ L D +G+ + C F+VH++H
Sbjct: 214 AVDVGGNPLLSSFDCMSGADLDCCFDVHQQH 244
>11_06_0002 + 19154489-19155172,19155260-19155298
Length = 240
Score = 25.8 bits (54), Expect = 9.3
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 150 RLVRIGPTHSSSGQPQPVAGGIRHQRRAQLDSRGAESLR 266
RLV +GP H + QP+ +H+ A L R + LR
Sbjct: 79 RLVSLGPFHHGEAELQPMEKH-KHRAVAHLIERSGKPLR 116
>10_02_0175 - 6207485-6207898
Length = 137
Score = 25.8 bits (54), Expect = 9.3
Identities = 18/58 (31%), Positives = 24/58 (41%)
Frame = +2
Query: 155 GPDRADPLKLRATSACRRWHPAPAPCSAGLPWRRVAEGALQRIQNPDLDRRRGGPGQE 328
G R + RA +A RW A A WR+ G +R PD + GG G +
Sbjct: 35 GGGRKRRRRRRAEAATARWRAAAARRGEWRRWRQRRRGGGRR--RPDAVKGGGGGGAD 90
>09_04_0376 + 17077737-17078447
Length = 236
Score = 25.8 bits (54), Expect = 9.3
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -2
Query: 240 PAEHGAGAGCHLRQAEVARSLSGSALSGP 154
PA +GAGAG H Q + A S GS P
Sbjct: 79 PATYGAGAGVH--QLDFAMSSPGSDSGAP 105
>09_03_0061 -
11967727-11967765,11967872-11967910,11967996-11968284,
11968367-11968515,11968693-11969469
Length = 430
Score = 25.8 bits (54), Expect = 9.3
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +1
Query: 109 NFKGTSNVTPIEVIGWSG*GRPTQAPGNLSLSQVASGTSA 228
N +GT P ++I RPT APG L + AS SA
Sbjct: 61 NARGTFIQWPKDLIEIRVTARPTTAPGGRPLKRPASAPSA 100
>07_03_0363 +
17225472-17226778,17226910-17226917,17227313-17227488,
17227822-17227882,17227955-17228053,17228155-17228249,
17228411-17228482,17228668-17228735,17228934-17229390,
17229486-17229596
Length = 817
Score = 25.8 bits (54), Expect = 9.3
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = +3
Query: 213 IRHQRRAQLDSRGAESLR--GHFKGYKIQTWTDAEEDRVKRSLWSPT 347
IR RR D +G L GH W D +E R KR++ P+
Sbjct: 144 IRADRRIHADYKGDAKLDKDGHPTAISNIAWKDNKEHRGKRNIEQPS 190
>04_03_0700 - 18836757-18837329
Length = 190
Score = 25.8 bits (54), Expect = 9.3
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 185 RATSACRRWHPAPAPCSAGLPWRRVAE 265
R A R W P C G WRR AE
Sbjct: 68 RIRGAQRVWPPIGEKCGNGARWRRRAE 94
>04_01_0568 -
7279478-7279590,7279749-7279988,7280078-7280141,
7280242-7280547,7280643-7280857,7281395-7281689,
7281906-7281983,7282070-7282705,7283016-7283102,
7283945-7284265,7285503-7287599
Length = 1483
Score = 25.8 bits (54), Expect = 9.3
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -3
Query: 164 YPDQPITSMGVTFDVPLKFTAVT 96
+PD P+ G+ +PL + A+T
Sbjct: 183 FPDDPLAFAGLALSLPLVYVAIT 205
>02_05_0243 -
27124559-27124864,27126922-27126990,27127741-27127926,
27128572-27129093
Length = 360
Score = 25.8 bits (54), Expect = 9.3
Identities = 8/13 (61%), Positives = 13/13 (100%)
Frame = +2
Query: 233 SAGLPWRRVAEGA 271
+AG+PWRR+A+G+
Sbjct: 105 AAGVPWRRLAQGS 117
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,563,876
Number of Sequences: 37544
Number of extensions: 261838
Number of successful extensions: 1173
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1172
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 506210712
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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