Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021105X
         (464 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            26   0.75 
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   2.3  
AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine...    24   3.0  
DQ004400-1|AAY21239.1|  144|Anopheles gambiae lysozyme c-5 protein.    23   5.3  
EF427621-5|ABO09853.1|   62|Anopheles gambiae tal-like protein A...    23   6.9  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    23   6.9  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    22   9.2  
AF457547-1|AAL68777.1|  163|Anopheles gambiae selenoprotein prot...    22   9.2  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.8 bits (54), Expect = 0.75
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -2

Query: 397 SIKLIKKPFSLFSRWSGFVMNTKSFSSSSKNIEMAVDL 284
           +++L+KKP SL S W       +       N ++A+ L
Sbjct: 156 TVRLLKKPPSLDSEWKSSTSTIQLIEQLDSNKQLAIAL 193


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 127 EYPQHVCDRSRRSRQVNPHGLVGFQG 204
           ++P HVC+R  R+  +N   +V   G
Sbjct: 350 QHPLHVCERFERASVINREEIVRKHG 375


>AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine
           protease protein.
          Length = 405

 Score = 23.8 bits (49), Expect = 3.0
 Identities = 13/46 (28%), Positives = 18/46 (39%)
 Frame = -1

Query: 257 LRVSVKRVSPVSHQQ*YRPWKPTSP*GLTCRDRRERSQTCCGYSAS 120
           L++S+  V      + +RPW      G  C        TC G S S
Sbjct: 310 LKLSLPYVEREKCSKTFRPWSFALGPGQMCAGGERAKDTCAGDSGS 355


>DQ004400-1|AAY21239.1|  144|Anopheles gambiae lysozyme c-5 protein.
          Length = 144

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 15/66 (22%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
 Frame = +1

Query: 151 RSRRSRQVNPHGLVGFQGRYHC--WCETGETRFTDTRRTNKTVASPLNLRPSLCSSSLKR 324
           RS +  +   +GL   Q  YHC  W    E     +   N  ++  +      C+ S+ R
Sbjct: 60  RSAKKNRSKYYGLFQLQSAYHCNEWIAGNECHLKCSSLVNDDISDDMR-----CARSIYR 114

Query: 325 KI*YSS 342
           +  ++S
Sbjct: 115 RSFFNS 120


>EF427621-5|ABO09853.1|   62|Anopheles gambiae tal-like protein AA
           protein.
          Length = 62

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +3

Query: 186 TRWFPRPVSLLVRDRRDPFH*HAKDEQD 269
           T  + RP S     +R PFH H + +Q+
Sbjct: 8   TGMYRRPGSGASSSQRSPFHHHHQQQQN 35


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 8/21 (38%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = +3

Query: 3   PFSKRTPLLAYGSW-FNRTKI 62
           PF ++T ++ +GSW FN  ++
Sbjct: 159 PFDQQTCIMKFGSWTFNGDQV 179


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 22.2 bits (45), Expect = 9.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 3   PFSKRTPLLAYGSW 44
           PF ++T +L +GSW
Sbjct: 160 PFDEQTCVLKFGSW 173


>AF457547-1|AAL68777.1|  163|Anopheles gambiae selenoprotein
           protein.
          Length = 163

 Score = 22.2 bits (45), Expect = 9.2
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +2

Query: 56  KNHKPSKMVNFTVDEIRGM 112
           K+ +P+K  N T+  +RG+
Sbjct: 96  KSDRPAKFPNLTIKYVRGL 114


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 471,617
Number of Sequences: 2352
Number of extensions: 8726
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 40395045
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)