Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021105X
(464 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 98 2e-21
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 97 7e-21
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 43 1e-04
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 42 2e-04
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 41 4e-04
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 41 4e-04
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 37 0.006
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 37 0.006
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 33 0.13
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 33 0.13
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 33 0.13
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 33 0.13
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 33 0.13
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 32 0.18
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 32 0.18
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 32 0.18
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 30 0.71
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 30 0.71
AL031627-6|CAA20958.1| 338|Caenorhabditis elegans Hypothetical ... 30 0.94
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 29 1.2
Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical p... 29 1.6
Z81586-1|CAB04690.1| 579|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z48055-8|CAA88133.2| 379|Caenorhabditis elegans Hypothetical pr... 27 8.8
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 98.3 bits (234), Expect = 2e-21
Identities = 53/72 (73%), Positives = 58/72 (80%), Gaps = 8/72 (11%)
Frame = +3
Query: 255 KDEQDRCITIKSTAISMFFELEEKDLVFITNPDQRE------KSEK--GFLINLIDSPGH 410
KDEQ+RCITIKSTAIS+FFELE+KDL F+ +Q E K EK GFLINLIDSPGH
Sbjct: 61 KDEQERCITIKSTAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGH 120
Query: 411 VDFSSEVTAALR 446
VDFSSEVTAALR
Sbjct: 121 VDFSSEVTAALR 132
Score = 96.7 bits (230), Expect = 7e-21
Identities = 45/50 (90%), Positives = 49/50 (98%)
Frame = +2
Query: 77 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGAR 226
MVNFTVDEIR +MD+KRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAG++
Sbjct: 1 MVNFTVDEIRALMDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSK 50
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 96.7 bits (230), Expect = 7e-21
Identities = 45/50 (90%), Positives = 49/50 (98%)
Frame = +2
Query: 77 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGAR 226
MVNFTVDEIR +MD+KRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAG++
Sbjct: 1 MVNFTVDEIRALMDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSK 50
Score = 96.3 bits (229), Expect = 1e-20
Identities = 52/71 (73%), Positives = 57/71 (80%), Gaps = 8/71 (11%)
Frame = +3
Query: 255 KDEQDRCITIKSTAISMFFELEEKDLVFITNPDQRE------KSEK--GFLINLIDSPGH 410
KDEQ+RCITIKSTAIS+FFELE+KDL F+ +Q E K EK GFLINLIDSPGH
Sbjct: 61 KDEQERCITIKSTAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGH 120
Query: 411 VDFSSEVTAAL 443
VDFSSEVTAAL
Sbjct: 121 VDFSSEVTAAL 131
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 42.7 bits (96), Expect = 1e-04
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +3
Query: 381 LINLIDSPGHVDFSSEVTAAL 443
LINLIDSPGHVDFS EVT+AL
Sbjct: 84 LINLIDSPGHVDFSGEVTSAL 104
Score = 40.3 bits (90), Expect = 7e-04
Identities = 16/30 (53%), Positives = 24/30 (80%)
Frame = +2
Query: 128 NIRNMSVIAHVDHGKSTLTDSLVSKAGIIA 217
+IRN+ ++AHVDHGK++ DSLVS +I+
Sbjct: 19 HIRNVCLVAHVDHGKTSFADSLVSANAVIS 48
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 42.7 bits (96), Expect = 1e-04
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +3
Query: 381 LINLIDSPGHVDFSSEVTAAL 443
LINLIDSPGHVDFS EVT+AL
Sbjct: 84 LINLIDSPGHVDFSGEVTSAL 104
Score = 40.3 bits (90), Expect = 7e-04
Identities = 16/30 (53%), Positives = 24/30 (80%)
Frame = +2
Query: 128 NIRNMSVIAHVDHGKSTLTDSLVSKAGIIA 217
+IRN+ ++AHVDHGK++ DSLVS +I+
Sbjct: 19 HIRNVCLVAHVDHGKTSFADSLVSANAVIS 48
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 41.9 bits (94), Expect = 2e-04
Identities = 16/24 (66%), Positives = 23/24 (95%)
Frame = +3
Query: 372 KGFLINLIDSPGHVDFSSEVTAAL 443
+G+L+NLID+PGHVDFS+EV+ +L
Sbjct: 100 RGYLLNLIDTPGHVDFSAEVSRSL 123
Score = 41.1 bits (92), Expect = 4e-04
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 131 IRNMSVIAHVDHGKSTLTDSLVSKAGII 214
IRN ++AHVDHGKSTL D L+ G +
Sbjct: 42 IRNFGIVAHVDHGKSTLADRLLEMCGAV 69
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 41.1 bits (92), Expect = 4e-04
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = +3
Query: 333 VFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALR 446
V I D R KS +L+N+ID+PGHV+FS E+TA+ R
Sbjct: 189 VSIVAQDSRSKS---YLLNIIDTPGHVNFSDEMTASYR 223
Score = 30.3 bits (65), Expect = 0.71
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 110 MMDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 202
+MD +RN+++ H+ HGK+T D L+ +
Sbjct: 125 LMDCPHIMRNVAIAGHLHHGKTTFLDCLMEQ 155
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 41.1 bits (92), Expect = 4e-04
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = +3
Query: 333 VFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALR 446
V I D R KS +L+N+ID+PGHV+FS E+TA+ R
Sbjct: 64 VSIVAQDSRSKS---YLLNIIDTPGHVNFSDEMTASYR 98
Score = 29.5 bits (63), Expect = 1.2
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 113 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 202
MD +RN+++ H+ HGK+T D L+ +
Sbjct: 1 MDCPHIMRNVAIAGHLHHGKTTFLDCLMEQ 30
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 37.1 bits (82), Expect = 0.006
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +3
Query: 375 GFLINLIDSPGHVDFSSEVTAALRSL 452
G IN+ID+PGHVDF+ EV ALR L
Sbjct: 111 GTNINIIDTPGHVDFTVEVERALRVL 136
Score = 32.7 bits (71), Expect = 0.13
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +2
Query: 131 IRNMSVIAHVDHGKSTLTDSLVSKAGII 214
IRN+ + AH+D GK+T+T+ ++ AG I
Sbjct: 44 IRNIGISAHIDSGKTTVTERILYYAGRI 71
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 37.1 bits (82), Expect = 0.006
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +3
Query: 372 KGFLINLIDSPGHVDFSSEVTAALRSL 452
KG INLID+PGHVDF EV +R L
Sbjct: 88 KGHRINLIDTPGHVDFRVEVERCVRVL 114
Score = 36.3 bits (80), Expect = 0.011
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +2
Query: 131 IRNMSVIAHVDHGKSTLTDSLVSKAGII 214
+RN+ VIAHVD GK+T+T+ L+ AG I
Sbjct: 25 LRNIGVIAHVDAGKTTVTERLLYLAGAI 52
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 32.7 bits (71), Expect = 0.13
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 113 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 208
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 32
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 32.7 bits (71), Expect = 0.13
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 113 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 208
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 32
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 32.7 bits (71), Expect = 0.13
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 113 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 208
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 32
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 32.7 bits (71), Expect = 0.13
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 113 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 208
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 32
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 32.7 bits (71), Expect = 0.13
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 113 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 208
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 32
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 32.3 bits (70), Expect = 0.18
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 137 NMSVIAHVDHGKSTLTDSLVSKAGIIAGAR 226
N+ I HVDHGK+TLT ++ GA+
Sbjct: 51 NVGTIGHVDHGKTTLTSAITKILATSKGAK 80
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 32.3 bits (70), Expect = 0.18
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 137 NMSVIAHVDHGKSTLTDSLVSKAGIIAGAR 226
N+ I HVDHGK+TLT ++ GA+
Sbjct: 52 NVGTIGHVDHGKTTLTSAITKILATSKGAK 81
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 32.3 bits (70), Expect = 0.18
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 137 NMSVIAHVDHGKSTLTDSLVSKAGIIAGAR 226
N+ I HVDHGK+TLT ++ GA+
Sbjct: 52 NVGTIGHVDHGKTTLTSAITKILATSKGAK 81
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 30.3 bits (65), Expect = 0.71
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 137 NMSVIAHVDHGKSTLTDSL 193
N+ I H+DHGK+TLT ++
Sbjct: 47 NVGTIGHIDHGKTTLTSAI 65
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 30.3 bits (65), Expect = 0.71
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 137 NMSVIAHVDHGKSTLTDSL 193
N+ I H+DHGK+TLT ++
Sbjct: 47 NVGTIGHIDHGKTTLTSAI 65
>AL031627-6|CAA20958.1| 338|Caenorhabditis elegans Hypothetical
protein Y102A5C.15 protein.
Length = 338
Score = 29.9 bits (64), Expect = 0.94
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = -2
Query: 397 SIKLIKKPFSLFSRWSGFVMNTKSFSSSSKNIEMAVDLMVMQ 272
S+ L+ PF L +R +G+ + FSS S + MAV ++ +Q
Sbjct: 68 SVTLLGIPFILATRLAGYSLGLLKFSSYSFLVTMAVSVLSLQ 109
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 29.5 bits (63), Expect = 1.2
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +2
Query: 116 DKKRNIRNMSVIAHVDHGKSTLTDSL 193
D +R ++++ HVDHGK+TL D++
Sbjct: 151 DLERRPPIVTIMGHVDHGKTTLLDAM 176
>Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 29.1 bits (62), Expect = 1.6
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 79 GEFHGRRDPWDDGQEAEYPQHVCDRS 156
GEFHG WD+ ++EY + DR+
Sbjct: 666 GEFHGTTKSWDNITKSEYGTFLLDRA 691
>Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 29.1 bits (62), Expect = 1.6
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 79 GEFHGRRDPWDDGQEAEYPQHVCDRS 156
GEFHG WD+ ++EY + DR+
Sbjct: 666 GEFHGTTKSWDNITKSEYGTFLLDRA 691
>Z81586-1|CAB04690.1| 579|Caenorhabditis elegans Hypothetical
protein T05F1.2 protein.
Length = 579
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = -1
Query: 209 YRPWKPTSP*GLTCRDRRERSQTCCGYSASCPSSHGSRLP 90
YR WK P GL ++ GY +S P S S P
Sbjct: 438 YREWKVLRPDGLQSTRGFQKESLSSGYGSSLPGSGPSTPP 477
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 27.5 bits (58), Expect = 5.0
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 125 RNIRNMSVIAHVDHGKSTLTDSLVSKAGII 214
+++ N+ V+ HVD GKSTL L+ ++
Sbjct: 168 KDLINLIVVGHVDAGKSTLMGHLLHDLEVV 197
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 27.5 bits (58), Expect = 5.0
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 125 RNIRNMSVIAHVDHGKSTLTDSLVSKAGII 214
+++ N+ V+ HVD GKSTL L+ ++
Sbjct: 186 KDLINLIVVGHVDAGKSTLMGHLLHDLEVV 215
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 27.1 bits (57), Expect = 6.6
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 137 NMSVIAHVDHGKSTLTDSLVSKAGII 214
NM + HVD GKST+ L+ G++
Sbjct: 111 NMVFVGHVDAGKSTIGGQLMFLTGMV 136
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 26.6 bits (56), Expect = 8.8
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +2
Query: 137 NMSVIAHVDHGKSTLT 184
N+ ++ HVD GK+TLT
Sbjct: 15 NLGILGHVDSGKTTLT 30
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 26.6 bits (56), Expect = 8.8
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +2
Query: 137 NMSVIAHVDHGKSTLT 184
N+ ++ HVD GK+TLT
Sbjct: 15 NLGILGHVDSGKTTLT 30
>Z48055-8|CAA88133.2| 379|Caenorhabditis elegans Hypothetical
protein T07A5.1 protein.
Length = 379
Score = 26.6 bits (56), Expect = 8.8
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 297 ISMFFELEEKDLVFITNPDQREKSEKGFLINL 392
I +FFE EEK V + + D +EK+ K L NL
Sbjct: 23 IKIFFE-EEKFDVLVVSLDSKEKTSKECLSNL 53
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,495,322
Number of Sequences: 27780
Number of extensions: 211892
Number of successful extensions: 631
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 629
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 829055604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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