Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021104
         (715 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ290452-1|CAC44459.1|  437|Homo sapiens NB1 Glycoprotein protein.     31   3.1  
BT020111-1|AAV38914.1|  437|Homo sapiens polycythemia rubra vera...    31   5.4  
BC029167-1|AAH29167.1|  437|Homo sapiens CD177 molecule protein.       31   5.4  
AY358932-1|AAQ89291.1|  437|Homo sapiens PRV1 protein.                 31   5.4  
AF146747-1|AAG00895.1|  437|Homo sapiens cell surface receptor p...    31   5.4  
AB237911-1|BAE93254.1|  417|Homo sapiens CD177 protein.                31   5.4  

>AJ290452-1|CAC44459.1|  437|Homo sapiens NB1 Glycoprotein protein.
          Length = 437

 Score = 31.5 bits (68), Expect = 3.1
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = -3

Query: 620 GSLVSNKTHFNNKDKCRVLSEMSIKSNSL--SSLDIPEKEQC 501
           G LV++ THF + D C   S  S+  NSL   +  +P  +QC
Sbjct: 284 GVLVASYTHFCSSDLCNSASSSSVLLNSLPPQAAPVPGDQQC 325


>BT020111-1|AAV38914.1|  437|Homo sapiens polycythemia rubra vera 1
           protein.
          Length = 437

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = -3

Query: 620 GSLVSNKTHFNNKDKCRVLSEMSIKSNSL--SSLDIPEKEQC 501
           G LV++ THF + D C   S  S+  NSL   +  +P   QC
Sbjct: 284 GVLVASYTHFCSSDLCNSASSSSVLLNSLPPQAAPVPGDRQC 325


>BC029167-1|AAH29167.1|  437|Homo sapiens CD177 molecule protein.
          Length = 437

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = -3

Query: 620 GSLVSNKTHFNNKDKCRVLSEMSIKSNSL--SSLDIPEKEQC 501
           G LV++ THF + D C   S  S+  NSL   +  +P   QC
Sbjct: 284 GVLVASYTHFCSSDLCNSASSSSVLLNSLPPQAAPVPGDRQC 325


>AY358932-1|AAQ89291.1|  437|Homo sapiens PRV1 protein.
          Length = 437

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = -3

Query: 620 GSLVSNKTHFNNKDKCRVLSEMSIKSNSL--SSLDIPEKEQC 501
           G LV++ THF + D C   S  S+  NSL   +  +P   QC
Sbjct: 284 GVLVASYTHFCSSDLCNSASSSSVLLNSLPPQAAPVPGDRQC 325


>AF146747-1|AAG00895.1|  437|Homo sapiens cell surface receptor
           protein.
          Length = 437

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = -3

Query: 620 GSLVSNKTHFNNKDKCRVLSEMSIKSNSL--SSLDIPEKEQC 501
           G LV++ THF + D C   S  S+  NSL   +  +P   QC
Sbjct: 284 GVLVASYTHFCSSDLCNSASSSSVLLNSLPPQAAPVPGDRQC 325


>AB237911-1|BAE93254.1|  417|Homo sapiens CD177 protein.
          Length = 417

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = -3

Query: 620 GSLVSNKTHFNNKDKCRVLSEMSIKSNSL--SSLDIPEKEQC 501
           G LV++ THF + D C   S  S+  NSL   +  +P   QC
Sbjct: 284 GVLVASYTHFCSSDLCNSASSSSVLLNSLPPQAAPVPGDRQC 325


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,684,485
Number of Sequences: 237096
Number of extensions: 1820502
Number of successful extensions: 3067
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3067
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)