Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021104
         (715 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69637-7|CAO78728.1|  433|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z69637-1|CAA93467.1|  601|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z67735-3|CAA91531.3|  513|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>Z69637-7|CAO78728.1|  433|Caenorhabditis elegans Hypothetical
           protein F35G2.1b protein.
          Length = 433

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = -2

Query: 501 FQNTIY-LRKKKLTSIYLRNSTRVHLI 424
           FQN I  +R K+ TS+ LRNS R  L+
Sbjct: 205 FQNDIRRMRAKRTTSVILRNSERARLV 231


>Z69637-1|CAA93467.1|  601|Caenorhabditis elegans Hypothetical
           protein F35G2.1a protein.
          Length = 601

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = -2

Query: 501 FQNTIY-LRKKKLTSIYLRNSTRVHLI 424
           FQN I  +R K+ TS+ LRNS R  L+
Sbjct: 373 FQNDIRRMRAKRTTSVILRNSERARLV 399


>Z67735-3|CAA91531.3|  513|Caenorhabditis elegans Hypothetical
           protein C15A7.2 protein.
          Length = 513

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +3

Query: 435 LL*NFLDKLMLVFFFLSKSCSGTLFFFWYIE 527
           +L ++LDKL LV  F+   CS  L  FW I+
Sbjct: 302 MLLSWLDKLFLVGMFIVFICSYLLMQFWEIK 332


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,262,586
Number of Sequences: 27780
Number of extensions: 304881
Number of successful extensions: 559
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 559
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)