Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021055
         (672 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U22832-1|AAA64507.1|  293|Caenorhabditis elegans Hypothetical pr...    34   0.080
Z81527-11|CAI91173.1|  390|Caenorhabditis elegans Hypothetical p...    28   6.9  

>U22832-1|AAA64507.1|  293|Caenorhabditis elegans Hypothetical
           protein C09F5.2 protein.
          Length = 293

 Score = 34.3 bits (75), Expect = 0.080
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = +3

Query: 573 AVPKEMLVAFTVCTTLLVESTCSRLMISTCILP 671
           + PK +L+   V T+LLV      LM+STCILP
Sbjct: 142 STPKPLLIVLGVVTSLLVSVHLLALMMSTCILP 174


>Z81527-11|CAI91173.1|  390|Caenorhabditis elegans Hypothetical
           protein F35E12.9b protein.
          Length = 390

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/42 (28%), Positives = 24/42 (57%)
 Frame = -1

Query: 300 LLSFGHQLLEGYRPPVKRSGSCFHQYWLTKPTYLNKLHDNPS 175
           +L++ ++ LE Y+  +K++G  F    +T  +Y     DNP+
Sbjct: 73  MLTYLYKSLEAYKQTIKKTGEYFPLSLVTGISYYTITSDNPN 114


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,873,661
Number of Sequences: 27780
Number of extensions: 339008
Number of successful extensions: 684
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)