Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021054
(711 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit S... 107 2e-24
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 54 3e-08
SPBC215.15 |sec13||COPII-coated vesicle component Sec13|Schizosa... 37 0.002
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 34 0.023
SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2 |... 33 0.053
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 32 0.070
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 31 0.16
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 31 0.16
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 31 0.21
SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces p... 31 0.21
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 30 0.28
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 30 0.28
SPCC1235.09 |||histone deacetylase complex subunit|Schizosacchar... 30 0.28
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 30 0.38
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 30 0.38
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 30 0.38
SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9 |Schizosacchar... 29 0.66
SPAC167.07c ||SPAC57A7.03c|ubiquitin-protein ligase E3 |Schizosa... 29 0.87
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 29 0.87
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 28 1.1
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 28 1.1
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 28 1.5
SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein interm... 27 2.0
SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 27 2.0
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 27 2.0
SPAC15F9.02 |seh1||nucleoporin Seh1 |Schizosaccharomyces pombe|c... 27 2.6
SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa... 27 2.6
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 26 4.6
SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces po... 26 4.6
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 4.6
SPCC4B3.13 |||MatE family transporter|Schizosaccharomyces pombe|... 26 4.6
SPAC17A2.11 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 4.6
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 26 6.1
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 26 6.1
SPBC3B9.15c |scp1||sterol regulatory element binding protein Scp... 26 6.1
SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyc... 25 8.1
SPBC577.14c |spa1|spa|ornithine decarboxylase antizyme Spa1|Schi... 25 8.1
>SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit
Sop2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 377
Score = 107 bits (257), Expect = 2e-24
Identities = 45/78 (57%), Positives = 57/78 (73%)
Frame = +3
Query: 273 NEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWAT 452
N+V +Y+++GN WK +HD V +DWAP +NRIVTCS DRNAYV+ + DG W
Sbjct: 33 NQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQ 92
Query: 453 TLVLLRINRAATCVKWSP 506
TLVLLR+NRAAT V+WSP
Sbjct: 93 TLVLLRLNRAATFVRWSP 110
Score = 69.3 bits (162), Expect = 5e-13
Identities = 26/34 (76%), Positives = 34/34 (100%)
Frame = +2
Query: 506 HENKFAVGSGARLISICYFEKENNWWVSKHIKKP 607
+E+KFAVGSGAR+IS+CYFE+EN+WWVSKH+K+P
Sbjct: 111 NEDKFAVGSGARVISVCYFEQENDWWVSKHLKRP 144
Score = 48.4 bits (110), Expect = 1e-06
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = +1
Query: 607 IRSTVTSIDWHPNNILLVAGSADFKVRVFSA 699
+RST+ S+DWHPNN+LL AG AD K V SA
Sbjct: 145 LRSTILSLDWHPNNVLLAAGCADRKAYVLSA 175
Score = 31.9 bits (69), Expect = 0.093
Identities = 25/107 (23%), Positives = 42/107 (39%), Gaps = 4/107 (3%)
Frame = +3
Query: 222 MSCMEQG*KSNAF---SPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVT 392
++C++ KSN S + N K+ WKQT L+ + + W+PN ++
Sbjct: 58 VTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAV 117
Query: 393 CSVDRNAYVWTQGDDGKWATTLVLLR-INRAATCVKWSPMRTSLLSG 530
S R V + W + L R + + W P L +G
Sbjct: 118 GSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAG 164
Score = 31.5 bits (68), Expect = 0.12
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +3
Query: 288 YKKEGNDWKQTNNLVEHDLR--VMGIDWAPNTNRIVTCSVDRNAYV 419
Y ++ NDW + +L + LR ++ +DW PN + DR AYV
Sbjct: 128 YFEQENDWWVSKHL-KRPLRSTILSLDWHPNNVLLAAGCADRKAYV 172
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 53.6 bits (123), Expect = 3e-08
Identities = 27/84 (32%), Positives = 42/84 (50%)
Frame = +3
Query: 279 VHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTL 458
V I +K +DW+ T L H+ V I W+ N N + TCS D++ ++W +D ++
Sbjct: 358 VSINEKIDDDWECTAALEGHENEVKCIAWSCNGNYLATCSRDKSVWIWEATEDDEFDCLA 417
Query: 459 VLLRINRAATCVKWSPMRTSLLSG 530
VL + V W P L+SG
Sbjct: 418 VLQEHTQDVKVVTWHPTEDLLVSG 441
Score = 42.7 bits (96), Expect = 5e-05
Identities = 22/84 (26%), Positives = 40/84 (47%)
Frame = +3
Query: 270 NNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWA 449
+N + ++ +G+DW T L H V + ++PN N + + D N ++W + +
Sbjct: 444 DNSICFWRDDGDDWALTCQLQGHTNTVWALAFSPNGNTLASADNDGNVFLWIKISSNEDV 503
Query: 450 TTLVLLRINRAATCVKWSPMRTSL 521
T+ I R A +W +TSL
Sbjct: 504 ATIDSTNILRPALQEEWK-QQTSL 526
Score = 31.1 bits (67), Expect = 0.16
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +3
Query: 327 LVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW-TQGDDGKWATTLVLLRINRAATCVKWS 503
L EH V + W P + +V+ S D + W GDD WA T L + +S
Sbjct: 419 LQEHTQDVKVVTWHPTEDLLVSGSYDNSICFWRDDGDD--WALTCQLQGHTNTVWALAFS 476
Query: 504 PMRTSLLS 527
P +L S
Sbjct: 477 PNGNTLAS 484
Score = 25.4 bits (53), Expect = 8.1
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 619 VTSIDWHPNNILLVAGSAD 675
V + WHP LLV+GS D
Sbjct: 426 VKVVTWHPTEDLLVSGSYD 444
>SPBC215.15 |sec13||COPII-coated vesicle component
Sec13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 37.1 bits (82), Expect = 0.002
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Frame = +3
Query: 303 NDWKQTNNLVEHDLRVMGIDWAPNTNR----IVTCSVDRNAYVWTQGDDGKW-ATTLVLL 467
N+W + L H + WAP+ + + S D+N ++WT+ DG W T L
Sbjct: 193 NNWILEDTLAGHVDWTRDVAWAPSVGLTKTYLASASQDKNVFIWTKEGDGPWQKTPLTEE 252
Query: 468 RINRAATCVKWS 503
+ A V WS
Sbjct: 253 KFPDIAWRVSWS 264
Score = 35.9 bits (79), Expect = 0.006
Identities = 28/121 (23%), Positives = 49/121 (40%), Gaps = 2/121 (1%)
Frame = +3
Query: 270 NNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNT-NRIVTC-SVDRNAYVWTQGDDGK 443
+ V ++++ G W + + H V + WAP+ ++ C S D V DDG
Sbjct: 76 DGHVIVWRETGGVWSELMDHTAHQASVNAVSWAPHEYGALLACASSDGKVSVLEFKDDGS 135
Query: 444 WATTLVLLRINRAATCVKWSPMRTSLLSGQELD*YQFAILRRKIIGGCLSILRSHSFDCD 623
T + V WSP LSG + A ++ GC ++++ +FD
Sbjct: 136 -CDTRIFTAHEPGCNAVCWSP---PSLSGSVVGQSPAAGPKKLATAGCDNLVKIWAFDAG 191
Query: 624 I 626
+
Sbjct: 192 V 192
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 33.9 bits (74), Expect = 0.023
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 324 NLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 422
NL H L V+ +D + ++ +VTCS D+N +W
Sbjct: 571 NLYGHKLPVLSMDISYDSKLLVTCSADKNVKIW 603
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 324 NLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVLLR 470
++ H +M + + P+T TCS DR W DGK ++ LR
Sbjct: 613 SIFAHQDSIMEVTFQPDTYNFFTCSKDREVRYW----DGKSFDLILKLR 657
>SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 760
Score = 32.7 bits (71), Expect = 0.053
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 327 LVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW-TQGDDGKWATT 455
L+ H+ VM +DW P I++ S D + VW + G W T
Sbjct: 264 LMGHEDWVMSVDWHPTKEMILSSSADSSMIVWEPDTNTGIWVVT 307
Score = 28.3 bits (60), Expect = 1.1
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 619 VTSIDWHPNNILLVAGSADFKVRVF 693
V S+DWHP ++++ SAD + V+
Sbjct: 271 VMSVDWHPTKEMILSSSADSSMIVW 295
Score = 27.5 bits (58), Expect = 2.0
Identities = 11/55 (20%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 285 IYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQ-GDDGKW 446
++K++ W Q ++ H V G+ W P ++ D+ ++ + D W
Sbjct: 352 LWKQDAGQWLQLPSISGHTKSVKGVAWDPEGKFYLSAGTDQTTRLFARFKKDNAW 406
Score = 26.6 bits (56), Expect = 3.5
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = +3
Query: 261 SPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDD 437
+P + + +Y E W Q L H L V I ++P+ I++ DR + Q ++
Sbjct: 554 TPEHAVIRLY--ETQSWNQQQVLKGHSLTVTTIKFSPDDRYILSAGRDRLVCLHEQAEN 610
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 32.3 bits (70), Expect = 0.070
Identities = 20/87 (22%), Positives = 37/87 (42%)
Frame = +3
Query: 276 EVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATT 455
+V+++ E N+++ N +H +P+ I SVD VW D K +
Sbjct: 82 DVYVWNPETNEFRDLGNNAQHPSECWSSCISPDGQTIAFTSVDGRIAVWDNPSDCKISE- 140
Query: 456 LVLLRINRAATCVKWSPMRTSLLSGQE 536
L + C+ +SP ++SG +
Sbjct: 141 --LDTKGKFGLCIDYSPNGRFIVSGHQ 165
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 31.1 bits (67), Expect = 0.16
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +3
Query: 327 LVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSP 506
L H+ V+ ++++PN + +C D+ +W + K +L+ + CV+W P
Sbjct: 217 LAAHNGVVLCVNYSPNGVFLASCGRDKTIRIWDSTSNKK--KSLITINNVSPLNCVRWRP 274
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 31.1 bits (67), Expect = 0.16
Identities = 18/73 (24%), Positives = 33/73 (45%)
Frame = +3
Query: 312 KQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVLLRINRAATC 491
K+ L+ H V I W+P+ +++CS D++ +W D L + + +C
Sbjct: 246 KRVFRLIGHIDTVAYIRWSPDDRYLLSCSCDKSVILW----DAFTGEKLRDYKHGFSVSC 301
Query: 492 VKWSPMRTSLLSG 530
W P S ++G
Sbjct: 302 CCWLPDGLSFITG 314
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 30.7 bits (66), Expect = 0.21
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 333 EHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDD 437
EH+L +G+ W+ N+ + S D+N YVW+ D
Sbjct: 269 EHNL--LGVAWSRNSRFVGAGSSDKNVYVWSATGD 301
>SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 352
Score = 30.7 bits (66), Expect = 0.21
Identities = 15/56 (26%), Positives = 31/56 (55%)
Frame = +3
Query: 255 AFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 422
A S +++V IY+ + L EH V+ ++W+ + ++ + SVD++A V+
Sbjct: 46 AASSWDSKVRIYEVQATGQSIGKALYEHQGPVLSVNWSRDGTKVASGSVDKSAKVF 101
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 30.3 bits (65), Expect = 0.28
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +3
Query: 312 KQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWT 425
K +L H+ +V +DW+P+ R+ + D+ +W+
Sbjct: 464 KMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIWS 501
Score = 26.6 bits (56), Expect = 3.5
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 619 VTSIDWHPNNILLVAGSADFKVRVFS 696
V ++DW P+ + +G AD VR++S
Sbjct: 476 VFAVDWSPDGQRVASGGADKAVRIWS 501
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 30.3 bits (65), Expect = 0.28
Identities = 10/44 (22%), Positives = 23/44 (52%)
Frame = +3
Query: 291 KKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 422
+K +W+ L+ HD + + W+ ++ +V+ +D + VW
Sbjct: 118 EKHTENWRSYRRLLGHDNDIQDLCWSYDSQLVVSVGLDSSIIVW 161
>SPCC1235.09 |||histone deacetylase complex
subunit|Schizosaccharomyces pombe|chr 3|||Manual
Length = 564
Score = 30.3 bits (65), Expect = 0.28
Identities = 16/75 (21%), Positives = 35/75 (46%)
Frame = +3
Query: 279 VHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTL 458
+ +YK +G T + HD ++ + + + ++T S D +W++GD G + L
Sbjct: 369 LRVYKVDGKAPVSTVSHA-HDNSIVALRYNLRISLLLTASSDTTVKLWSRGDAGAF-ECL 426
Query: 459 VLLRINRAATCVKWS 503
+ + C+ W+
Sbjct: 427 HVFSFSSPVNCIDWN 441
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 29.9 bits (64), Expect = 0.38
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +3
Query: 258 FSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQ 428
+S NN N+ Q ++L+ H V G+ +P I++CS D +W++
Sbjct: 376 YSSTNNGPQPLVGSQNEPLQKSSLIGHTRPVFGVSISPQKEFILSCSEDGFTRLWSK 432
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 29.9 bits (64), Expect = 0.38
Identities = 11/46 (23%), Positives = 22/46 (47%)
Frame = +3
Query: 285 IYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 422
+Y +G Q + H + I W+P++++ VT S + +W
Sbjct: 213 VYVFDGKTGDQVYEIDAHKGSIFSISWSPDSSQFVTSSAGYSCKIW 258
Score = 28.7 bits (61), Expect = 0.87
Identities = 18/85 (21%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 AFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGD 434
A + ++N ++ + G ++ +L H V + ++PN R + D YV+
Sbjct: 163 ATASDDNSINFF--HGTPYRFNRSLRVHSKFVYDVRYSPNDERFASAGADGKVYVF---- 216
Query: 435 DGKWATTLVLLRINRAAT-CVKWSP 506
DGK + + ++ + + WSP
Sbjct: 217 DGKTGDQVYEIDAHKGSIFSISWSP 241
Score = 25.4 bits (53), Expect = 8.1
Identities = 13/54 (24%), Positives = 21/54 (38%)
Frame = +3
Query: 255 AFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAY 416
A N V I+ G D N + R+ +DW ++ RI+ + Y
Sbjct: 74 ASGDNQGNVRIWDCAGEDKILKNQVTAISGRITDLDWDGDSQRIIAVGEGKERY 127
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 29.9 bits (64), Expect = 0.38
Identities = 24/91 (26%), Positives = 39/91 (42%)
Frame = +3
Query: 336 HDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMRT 515
H++ V + ++PN ++ VT S D + VW + L L V W P +
Sbjct: 163 HEMEVRDVAFSPNDSKFVTASDDGSLKVW---NFHMSTEELKLTGHGWDVKTVDWHPSKG 219
Query: 516 SLLSGQELD*YQFAILRRKIIGGCLSILRSH 608
L SG + + +F R G C++ L H
Sbjct: 220 LLASGSKDNLVKFWDPR---TGTCIATLHGH 247
Score = 28.7 bits (61), Expect = 0.87
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 619 VTSIDWHPNNILLVAGSADFKVR 687
V ++DWHP+ LL +GS D V+
Sbjct: 209 VKTVDWHPSKGLLASGSKDNLVK 231
>SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 524
Score = 29.1 bits (62), Expect = 0.66
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 336 HDLRVMGIDWAPNTNRIVTCSVDRNAYVWT 425
H VMG+ TN + +CS DR+ VW+
Sbjct: 249 HRDAVMGLAMRRGTNEMFSCSADRSIKVWS 278
>SPAC167.07c ||SPAC57A7.03c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1029
Score = 28.7 bits (61), Expect = 0.87
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 627 RCHSRTNGFLICLDTHQLFSFSK*QIDINLAPDP 526
+C + TNGF +D H L F + +I I + DP
Sbjct: 881 QCRAFTNGFTQIIDPHWLAMFHESEIQILVGGDP 914
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 28.7 bits (61), Expect = 0.87
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +3
Query: 327 LVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 422
L EH +++ + W+PN ++ T S D +W
Sbjct: 345 LDEHIRQIVAMAWSPNGYQLATSSADDTVKIW 376
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 28.3 bits (60), Expect = 1.1
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -2
Query: 461 NKSSCPFPIISLSPDVSITVNRTRNNTVGVGSPINPH 351
NK S I SLSP ++ + N ++ +G+ +NPH
Sbjct: 408 NKESIKQRIPSLSPPITRSYNAKHRPSLVLGTSVNPH 444
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 28.3 bits (60), Expect = 1.1
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +1
Query: 619 VTSIDWHPNNILLVAGSADFKVRVFS 696
V+SID++P LLV+GS D VR+++
Sbjct: 141 VSSIDFNPLGTLLVSGSWDETVRIWN 166
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 27.9 bits (59), Expect = 1.5
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 357 IDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWS 503
+DW+ N N +V +++RN YVW D G + L + VKWS
Sbjct: 186 LDWS-NLN-VVAVALERNVYVW-NADSGS-VSALAETDESTYVASVKWS 230
Score = 25.4 bits (53), Expect = 8.1
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +3
Query: 249 SNAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 422
++ F NN + Y G KQ + + HD RV+ +P+ + T + D N W
Sbjct: 408 THGFPDNNLSIWSYSSSGLT-KQVD-IPAHDTRVLYSALSPDGRILSTAASDENLKFW 463
>SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein
intermediate chain Dic1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 544
Score = 27.5 bits (58), Expect = 2.0
Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 369 PNTNRIVTCSVDRNAYVWTQGDDGKWATTLVL-LRINRAATCV 494
P +N IVTCS D ++W + + T+ L +++ ++ C+
Sbjct: 303 PPSNNIVTCSTDGLVHIWEPDMFSRPSETICLSSQVDSSSQCI 345
>SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 682
Score = 27.5 bits (58), Expect = 2.0
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = -2
Query: 491 ASRCSVDTQKNKSSCPFPIISLSPDVSITVNRTRNNTVGVGSPINPHHSKVVFH 330
A S T N + P PI +L PD T++ + ++ + +G+ PHHS + H
Sbjct: 142 ADNSSSSTTSNPNVAP-PISTL-PDPVATISSSSSSHLDMGAIHPPHHSSLPPH 193
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 27.5 bits (58), Expect = 2.0
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +3
Query: 327 LVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWT 425
L+ H V G ++P+ +++CS D +A +W+
Sbjct: 375 LLSHSGPVYGTTFSPDNKYLLSCSEDASARLWS 407
>SPAC15F9.02 |seh1||nucleoporin Seh1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 339
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 273 NEVHIYKKEGND-WKQTNNLVEHDLRVMGIDWAPN 374
N+ +IYK+ + WK+ L H + I WAP+
Sbjct: 192 NDAYIYKQNSHGKWKKVAELPGHTDLIRDICWAPS 226
>SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein
Mfr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 27.1 bits (57), Expect = 2.6
Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +3
Query: 336 HDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVLLRINRAAT-CVKWSPMR 512
H+ + G+ W + ++ + D N +VW D + + L + AA + WSP +
Sbjct: 248 HEQEICGLQWDRSLGQLASGGNDNNLFVW----DYRSSRPLHKFEEHTAAVKAIGWSPHQ 303
Query: 513 TSLLS 527
+L+
Sbjct: 304 RGILA 308
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 26.2 bits (55), Expect = 4.6
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 619 VTSIDWHPNNILLVAGSADFKVRVFS 696
V I +HP L V+G D+KV V++
Sbjct: 56 VRGIAFHPTQPLFVSGGDDYKVNVWN 81
>SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 556
Score = 26.2 bits (55), Expect = 4.6
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +3
Query: 327 LVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVLLRINRAAT-CVKWS 503
L H V G++W N N + + D VW + ++ L + AA + WS
Sbjct: 370 LTAHRQEVCGLEWNSNENLLASGGNDNALMVWDKFEE----KPLYSFHNHIAAVKAITWS 425
Query: 504 PMRTSLLS 527
P + +L+
Sbjct: 426 PHQRGILA 433
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.2 bits (55), Expect = 4.6
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 604 AIRSTVTSIDWHPNNILLVAGSAD 675
A V SI WHPNN +A + D
Sbjct: 211 AATGAVNSIAWHPNNATRLATAID 234
>SPCC4B3.13 |||MatE family transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 539
Score = 26.2 bits (55), Expect = 4.6
Identities = 7/25 (28%), Positives = 17/25 (68%)
Frame = -2
Query: 338 VFHKVVCLLPVISFLFVYVNFIIVW 264
+FH V +L ++ + +++N++ VW
Sbjct: 245 IFHPVTYILAIVVPINIFLNYLFVW 269
>SPAC17A2.11 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 217
Score = 26.2 bits (55), Expect = 4.6
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = -2
Query: 413 SITVNRTRNNTVGVGSPINPHHSKVVFHKVVCLLPVISF----LFVYVNFIIVW*ECI*L 246
+I ++T N V V I KV+ ++ LL + S L ++NF +++ + I
Sbjct: 109 NILQDKTSVN-VNVNKLIPIPKKKVLKNRAKSLLSIKSHVHFHLIPFINFFLLYHQIILS 167
Query: 245 LSLFHA*HVIGAH 207
SLFH H+I H
Sbjct: 168 HSLFHISHLISFH 180
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 25.8 bits (54), Expect = 6.1
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +3
Query: 336 HDLRVMGIDWAPNTNRIVTCSVDRNAYVW 422
H LR+ + + P N ++ S+D++ VW
Sbjct: 546 HSLRIYSVLYEPERNICISGSMDKSIRVW 574
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 25.8 bits (54), Expect = 6.1
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -2
Query: 422 PDVSITVNRTRNNTVGVGSPINPHHSKVVFHKVVCLLP 309
PD I R R+++ + I+PHHS+ + ++ +P
Sbjct: 472 PDSDICFTRRRSDSNRTWTVIDPHHSQSFDNDILAEIP 509
>SPBC3B9.15c |scp1||sterol regulatory element binding protein
Scp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1086
Score = 25.8 bits (54), Expect = 6.1
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +3
Query: 330 VEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVL 464
V H L ++ I + N + +DR VW D +W T LVL
Sbjct: 592 VHHQLDILKIAVSENYKTFASVGLDRCLVVW---DLRQWCTKLVL 633
>SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 275
Score = 25.4 bits (53), Expect = 8.1
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +1
Query: 184 QTLTFGDSCAPITCHAWNKDRSQMHSHQTIMKFTYTKRKEMTGSKQTTLWNTT 342
+T F A + C + D +QM+ ++ K E TG+K+ +W T+
Sbjct: 26 RTKCFDSVYAALQCGYRHIDSAQMYHNEADCGRAILKFMEETGTKREDIWFTS 78
>SPBC577.14c |spa1|spa|ornithine decarboxylase antizyme
Spa1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 226
Score = 25.4 bits (53), Expect = 8.1
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 581 WVSKHIKKPFVRL*HLLIGIPITFCSSLALLTSKYESSLP 700
W H+K+ V + + + + CS L L K SSLP
Sbjct: 160 WEDVHLKEGLVAI--IDLAVDRLHCSKLVLFVDKNNSSLP 197
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,004,890
Number of Sequences: 5004
Number of extensions: 65735
Number of successful extensions: 266
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 266
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 331187010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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