Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021053
(611 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 31 0.099
SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit Prp1|... 30 0.23
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa... 29 0.53
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 28 0.93
SPAC3C7.12 |tip1|noc1|CLIP170 family protein Tip1|Schizosaccharo... 28 1.2
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 27 1.6
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 27 1.6
SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces po... 27 1.6
SPBC725.13c |psf2|dre13, bsh3|GINS complex subunit Psf2|Schizosa... 27 2.1
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 27 2.8
SPBC3B8.09 |||U3 snoRNP-associated protein Utp3 |Schizosaccharom... 27 2.8
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 26 3.7
SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces p... 26 3.7
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 26 3.7
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 26 4.9
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 25 6.5
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 6.5
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 25 6.5
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 25 6.5
SPAC20G4.04c |hus1||checkpoint clamp complex protein Hus1|Schizo... 25 6.5
SPAC17G6.05c |||Rhophilin-2 homolog|Schizosaccharomyces pombe|ch... 25 6.5
SPAC22G7.04 |ubp13|pan2|poly|Schizosaccharomyces pombe|chr 1|||M... 25 6.5
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 25 6.5
SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyce... 25 8.6
SPBC27B12.12c |||CorA family magnesium ion transporter |Schizosa... 25 8.6
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 31.5 bits (68), Expect = 0.099
Identities = 15/59 (25%), Positives = 34/59 (57%)
Frame = +2
Query: 344 RTIDEKSAELDRLIAENEDTLHNLEEGIRRGRDLLEQGHDRQEELNDLLAKLDELRHKL 520
+ + ++ ELDRLI +++ + +E RD+ E H++ ++ +L + ++ +HKL
Sbjct: 754 KDLKQRLPELDRLILQSDQAIKKIE------RDMQEWKHNKGSKMAELEKEFNQYKHKL 806
>SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit
Prp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 906
Score = 30.3 bits (65), Expect = 0.23
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +3
Query: 21 LLAEKLENEARNIRDIADKAFNSSLVANKIAKDGINKQANISNEVQILTNELNAASGKLN 200
L AEKLEN+A++ + I KA + + + K+ +N + + N +L + ++
Sbjct: 346 LEAEKLENQAQHKKRIIKKALEFNPTSVSLWKEAVNLEEEVDNARILLARAVELIPMSID 405
Query: 201 SMTELAD-QALKRARAVYDK 257
LA + + A+ V +K
Sbjct: 406 LWLALARLETYENAKKVLNK 425
>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
Brl2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 680
Score = 29.1 bits (62), Expect = 0.53
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 311 NKLHEDSMEMNRTIDEKSAELDRLIAENEDTLHNLE 418
N L E + + +D E+D+LI E E+ L+N+E
Sbjct: 248 NGLMESRSQSLKILDSNVNEMDKLIMERENALNNVE 283
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 28.3 bits (60), Expect = 0.93
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Frame = +2
Query: 284 TTLLPDI-KLNKLHEDSM----EMNRTIDEKSAELDRLIAENEDTLHNLEEGIRRGR--- 439
T ++ D+ KL H+D + ++ + + + R AE + +H+LEEG +
Sbjct: 1319 TKVVADLEKLQHEHDDWLIQRGDLEKALKDSEKNFLRKEAEMTENIHSLEEGKEETKKEI 1378
Query: 440 -DLLEQGHDRQEELNDLLAKLDELRHKLK 523
+L + D Q N L +LD L +++
Sbjct: 1379 AELSSRLEDNQLATNKLKNQLDHLNQEIR 1407
>SPAC3C7.12 |tip1|noc1|CLIP170 family protein
Tip1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 461
Score = 27.9 bits (59), Expect = 1.2
Identities = 13/39 (33%), Positives = 26/39 (66%)
Frame = +2
Query: 428 RRGRDLLEQGHDRQEELNDLLAKLDELRHKLKTTWNSRE 544
+R DLL + + Q++L ++LA +D+L+ L T +N ++
Sbjct: 140 KRIEDLLYERQNHQQQLEEVLATVDQLQ-SLVTNFNDQQ 177
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 27.5 bits (58), Expect = 1.6
Identities = 20/84 (23%), Positives = 39/84 (46%)
Frame = +2
Query: 275 EVNTTLLPDIKLNKLHEDSMEMNRTIDEKSAELDRLIAENEDTLHNLEEGIRRGRDLLEQ 454
E N T+L + + +E + TI K AELD+L D ++E + + E+
Sbjct: 964 ENNATVLSEKA--EFNEQCKSLQETIVTKDAELDKLTKYISDYKTEIQEMRLTNQKMNEK 1021
Query: 455 GHDRQEELNDLLAKLDELRHKLKT 526
++ L++ L ++ +L + T
Sbjct: 1022 SIQQEGSLSESLKRVKKLERENST 1045
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 27.5 bits (58), Expect = 1.6
Identities = 14/55 (25%), Positives = 30/55 (54%)
Frame = +2
Query: 356 EKSAELDRLIAENEDTLHNLEEGIRRGRDLLEQGHDRQEELNDLLAKLDELRHKL 520
+K L++++AE+E + +E + L + D+++ L L +LDE+ +L
Sbjct: 591 QKGEVLEQVVAESEAAKNMVESSNASIQQLKSEVADKEQTLAQLHLQLDEMTQRL 645
>SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1159
Score = 27.5 bits (58), Expect = 1.6
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Frame = +2
Query: 338 MNRTIDEKSAELDRLIAENEDTLHNLEEGIRRGRDLLEQGHDR-----QEELNDLLAKLD 502
+N + S + + + +D H L R R LE+GH + E+L+++ A D
Sbjct: 297 VNAEVQTDSNPGNTMFIDKQDIYHRLSTPTSRKRQTLEKGHIKAFSAVDEDLDEIFACED 356
Query: 503 ELRHKLKTTWNSREPR 550
++ + N + R
Sbjct: 357 DVHYTALPKQNPKSER 372
>SPBC725.13c |psf2|dre13, bsh3|GINS complex subunit
Psf2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 183
Score = 27.1 bits (57), Expect = 2.1
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 264 PKACHTQLWLSLKLDRQALS 205
PK C LWL+L+L +Q L+
Sbjct: 49 PKKCRVPLWLALELKKQNLA 68
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 26.6 bits (56), Expect = 2.8
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 529 VELTRATLTAANEIYKTLKEF 591
VE T+ ++AANE +KT K F
Sbjct: 54 VEETKKAISAANEAFKTYKNF 74
>SPBC3B8.09 |||U3 snoRNP-associated protein Utp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 597
Score = 26.6 bits (56), Expect = 2.8
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Frame = +2
Query: 353 DEKSAELDRLIAENEDTLHNLEEGIRRGR--DLLEQGHDR----QEELNDLLAKLDELRH 514
D KS + D A E+ + + + R +LE H +ELN L +L+E++
Sbjct: 176 DLKSIKQDSSAAAIEELVQQISPDLPRTELLKILEAKHPEFQLFLDELNQLKPQLNEIKE 235
Query: 515 KLKT 526
KLKT
Sbjct: 236 KLKT 239
Score = 26.2 bits (55), Expect = 3.7
Identities = 21/85 (24%), Positives = 40/85 (47%)
Frame = +2
Query: 323 EDSMEMNRTIDEKSAELDRLIAENEDTLHNLEEGIRRGRDLLEQGHDRQEELNDLLAKLD 502
+D ++ ++D+KS +L EN D +L R +L+E G + + +AK
Sbjct: 478 QDDLDYYESLDKKSKMAKKLRKENHDLERDLIRASRH-PELIELGEGDKRGITLDIAKNR 536
Query: 503 ELRHKLKTTWNSREPR*QLQMRFTR 577
L + +R PR + +MR+ +
Sbjct: 537 GLTPRRPK--ENRNPRLKKRMRYEK 559
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 26.2 bits (55), Expect = 3.7
Identities = 15/66 (22%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = +2
Query: 329 SMEMNRTIDEKSAELDRLIAENEDTLHNLEEGIRRGRDLLEQGHD-RQEELNDLLAKLDE 505
S ++ E ++ RL E + L ++EG ++ HD ++ L + L E
Sbjct: 308 SHKIKELTSENELKISRLQEEKDSLLKKVQEGASLAMQRVQNKHDLEKKRLQSAIQPLQE 367
Query: 506 LRHKLK 523
+ LK
Sbjct: 368 ENNSLK 373
>SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 595
Score = 26.2 bits (55), Expect = 3.7
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -2
Query: 133 CLLMPSLAILFATSEEL-KALSAMSLMFLASFSNF 32
C+L PSLA FA S +L +AL M L+ + F
Sbjct: 333 CILYPSLACCFADSLQLPEALRLMDLIAIYGLEMF 367
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 26.2 bits (55), Expect = 3.7
Identities = 18/81 (22%), Positives = 33/81 (40%)
Frame = +2
Query: 281 NTTLLPDIKLNKLHEDSMEMNRTIDEKSAELDRLIAENEDTLHNLEEGIRRGRDLLEQGH 460
N + ++ N ED + +E A + E +D +E G H
Sbjct: 81 NENEVDNVNNNDKKEDEDNVEENEEEADANEEEEEDEEDDEEDEEDEDESGGGRRKRARH 140
Query: 461 DRQEELNDLLAKLDELRHKLK 523
DR+ + D+ A++DE +L+
Sbjct: 141 DRRNQFLDIEAEVDEDEEELE 161
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 25.8 bits (54), Expect = 4.9
Identities = 23/74 (31%), Positives = 38/74 (51%)
Frame = +2
Query: 308 LNKLHEDSMEMNRTIDEKSAELDRLIAENEDTLHNLEEGIRRGRDLLEQGHDRQEELNDL 487
L++ E + ++E++ +L RL A+NED E + R +LLE+ + E ND
Sbjct: 46 LSRKSEAAESQLEELEEETKQL-RLKADNEDIQKTEAEQLSRKVELLEE----ELETNDK 100
Query: 488 LAKLDELRHKLKTT 529
L L E K++ T
Sbjct: 101 L--LRETTEKMRQT 112
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 25.4 bits (53), Expect = 6.5
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 299 DIKLNKLHEDSMEMNRTIDEKSAELDRLIAENEDTLHNLEEGIRRGRDLLEQGHD--RQE 472
+ KL +LHE + + R + E+D L+ EN + ++ EE I L E+ D + E
Sbjct: 370 ETKLKELHEQNRRLQRQKSLATQEID-LLRENLKS-YDDEEAI-----LSEKNTDMKKLE 422
Query: 473 ELNDLLAKLDELRHKLKT 526
+ L+ +DE + KL++
Sbjct: 423 RIEGLVKLVDEYKLKLES 440
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.4 bits (53), Expect = 6.5
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = +2
Query: 323 EDSMEMNRTIDEKSAELDRLIAENEDTLHNLEEGIRRGRDLLEQGHDRQEELNDLLAKLD 502
ED +E + +E+SA A NE L + E+ + D Q + +EE++D + D
Sbjct: 4010 EDLLETEQKSNEQSA------ANNESDLVSKEDDNKALEDKDRQEKEDEEEMSDDVGIDD 4063
Query: 503 ELRHKLKTTWNSREP 547
E++ ++ NS+ P
Sbjct: 4064 EIQPDIQEN-NSQPP 4077
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 25.4 bits (53), Expect = 6.5
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 415 RGGHKARSGLAGTRSRQAGGAQ 480
RGG R G G R R GGA+
Sbjct: 459 RGGFGGRGGFGGGRGRGRGGAR 480
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 25.4 bits (53), Expect = 6.5
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = +2
Query: 296 PDIKLNKLHEDSMEMNRTIDEKSAELDRL 382
P+ K++ D+M++ + + +LDRL
Sbjct: 382 PEFSFTKVYSDNMKLQQKVSSLKLQLDRL 410
>SPAC20G4.04c |hus1||checkpoint clamp complex protein
Hus1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 287
Score = 25.4 bits (53), Expect = 6.5
Identities = 23/88 (26%), Positives = 39/88 (44%)
Frame = +2
Query: 278 VNTTLLPDIKLNKLHEDSMEMNRTIDEKSAELDRLIAENEDTLHNLEEGIRRGRDLLEQG 457
VN ++PD ++ ++ +E+ TI E D ++ N D + NLE I L
Sbjct: 36 VNFVIVPDFRMTQVWS-VLEVE-TIFE-----DYVVQSNADNVINLEVPIDNFYKALRSA 88
Query: 458 HDRQEELNDLLAKLDELRHKLKTTWNSR 541
+ + L K ++ L TTW+ R
Sbjct: 89 ANASDSTVRLSKKNNQPLLSLSTTWSGR 116
>SPAC17G6.05c |||Rhophilin-2 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 775
Score = 25.4 bits (53), Expect = 6.5
Identities = 20/80 (25%), Positives = 33/80 (41%)
Frame = +2
Query: 302 IKLNKLHEDSMEMNRTIDEKSAELDRLIAENEDTLHNLEEGIRRGRDLLEQGHDRQEELN 481
+K N ME+ K+ EL + + T + EG+ +G + + R E+N
Sbjct: 676 LKQNPEFLRKMEVYNNQFSKNKELCSNLLSSSLTAKAISEGVSKGLEYYKTVEQRLAEIN 735
Query: 482 DLLAKLDELRHKLKTTWNSR 541
L + LR K T S+
Sbjct: 736 KTLGEQLLLRRKQGATCLSK 755
>SPAC22G7.04 |ubp13|pan2|poly|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1115
Score = 25.4 bits (53), Expect = 6.5
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -2
Query: 142 ILACLLMPSLAILFATSEELKALSAMSLMFLASFSNFS-ARSL 17
++ CLL L LFA +E + + FL +FSN S A+SL
Sbjct: 538 LMECLLC-ELGFLFAMLKESTGRNCQATNFLRAFSNSSFAQSL 579
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/53 (24%), Positives = 30/53 (56%)
Frame = +2
Query: 350 IDEKSAELDRLIAENEDTLHNLEEGIRRGRDLLEQGHDRQEELNDLLAKLDEL 508
++ ++E+DRL E ++ ++E I +DL E+ QEE +++++ +
Sbjct: 3324 LEPLNSEVDRLKLEQKNAEECIQETIAACKDLDEKLLQLQEEYASMISEIHSM 3376
>SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2310
Score = 25.0 bits (52), Expect = 8.6
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +3
Query: 102 NKIAKDGINKQANISNEV---QILTNELNAASGKLNSMTELADQALK 233
+K+ K + K + NE Q++T SGK N + +AD+A K
Sbjct: 359 DKLPKQHLFKYRPVDNEATYCQVVTVTGEKGSGKSNLLNAVADEARK 405
>SPBC27B12.12c |||CorA family magnesium ion transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 25.0 bits (52), Expect = 8.6
Identities = 17/69 (24%), Positives = 29/69 (42%)
Frame = +2
Query: 341 NRTIDEKSAELDRLIAENEDTLHNLEEGIRRGRDLLEQGHDRQEELNDLLAKLDELRHKL 520
+R +D + E R++ E+ E + +G D E + +EEL D R +
Sbjct: 340 DREVDSQVDENTRVVEEDVCFPMQEESHVNKGIDFDELDNFAEEELQKQRQNTDHFRSRQ 399
Query: 521 KTTWNSREP 547
+T EP
Sbjct: 400 YSTCKPFEP 408
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,968,951
Number of Sequences: 5004
Number of extensions: 33828
Number of successful extensions: 185
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 183
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 267622334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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