Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021052
         (802 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457348-1|CAG33629.1|  277|Homo sapiens FLJ22353 protein.             36   0.13 
BC064520-1|AAH64520.1|  277|Homo sapiens transmembrane protein 5...    36   0.13 
AL122004-6|CAI22342.1|  277|Homo sapiens transmembrane protein 5...    36   0.13 
AL122004-1|CAI22338.1|  201|Homo sapiens transmembrane protein 5...    36   0.13 
AK026006-1|BAB15317.1|  277|Homo sapiens protein ( Homo sapiens ...    36   0.13 

>CR457348-1|CAG33629.1|  277|Homo sapiens FLJ22353 protein.
          Length = 277

 Score = 36.3 bits (80), Expect = 0.13
 Identities = 25/115 (21%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
 Frame = +3

Query: 459 SQTNNGSENNETGPAKSRPLCIMINWLLARQKHVMKYATLYLEQGFDVLSVSCTPWQLMW 638
           SQ N+ S   +    + +P+ I++ W   + K++ KY+ +Y ++G  V+  +  PW +++
Sbjct: 19  SQKNSPSPGGKEAETR-QPVVILLGWGGCKDKNLAKYSAIYHKRGCIVIRYT-APWHMVF 76

Query: 639 -----PMKGSQLVAGDVLKFMASNENE-QPLVVHRVLDCWIHVGRSLLHVMNNRK 785
                 +   +++A  +L+ +   E E +PL+ H   +  + + R +L ++  R+
Sbjct: 77  FSESLGIPSLRVLAQKLLELLFDYEIEKEPLLFHVFSNGGVMLYRYVLELLQTRR 131


>BC064520-1|AAH64520.1|  277|Homo sapiens transmembrane protein 53
           protein.
          Length = 277

 Score = 36.3 bits (80), Expect = 0.13
 Identities = 25/115 (21%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
 Frame = +3

Query: 459 SQTNNGSENNETGPAKSRPLCIMINWLLARQKHVMKYATLYLEQGFDVLSVSCTPWQLMW 638
           SQ N+ S   +    + +P+ I++ W   + K++ KY+ +Y ++G  V+  +  PW +++
Sbjct: 19  SQKNSPSPGGKEAETR-QPVVILLGWGGCKDKNLAKYSAIYHKRGCIVIRYT-APWHMVF 76

Query: 639 -----PMKGSQLVAGDVLKFMASNENE-QPLVVHRVLDCWIHVGRSLLHVMNNRK 785
                 +   +++A  +L+ +   E E +PL+ H   +  + + R +L ++  R+
Sbjct: 77  FSESLGIPSLRVLAQKLLELLFDYEIEKEPLLFHVFSNGGVMLYRYVLELLQTRR 131


>AL122004-6|CAI22342.1|  277|Homo sapiens transmembrane protein 53
           protein.
          Length = 277

 Score = 36.3 bits (80), Expect = 0.13
 Identities = 25/115 (21%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
 Frame = +3

Query: 459 SQTNNGSENNETGPAKSRPLCIMINWLLARQKHVMKYATLYLEQGFDVLSVSCTPWQLMW 638
           SQ N+ S   +    + +P+ I++ W   + K++ KY+ +Y ++G  V+  +  PW +++
Sbjct: 19  SQKNSPSPGGKEAETR-QPVVILLGWGGCKDKNLAKYSAIYHKRGCIVIRYT-APWHMVF 76

Query: 639 -----PMKGSQLVAGDVLKFMASNENE-QPLVVHRVLDCWIHVGRSLLHVMNNRK 785
                 +   +++A  +L+ +   E E +PL+ H   +  + + R +L ++  R+
Sbjct: 77  FSESLGIPSLRVLAQKLLELLFDYEIEKEPLLFHVFSNGGVMLYRYVLELLQTRR 131


>AL122004-1|CAI22338.1|  201|Homo sapiens transmembrane protein 53
           protein.
          Length = 201

 Score = 36.3 bits (80), Expect = 0.13
 Identities = 25/115 (21%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
 Frame = +3

Query: 459 SQTNNGSENNETGPAKSRPLCIMINWLLARQKHVMKYATLYLEQGFDVLSVSCTPWQLMW 638
           SQ N+ S   +    + +P+ I++ W   + K++ KY+ +Y ++G  V+  +  PW +++
Sbjct: 19  SQKNSPSPGGKEAETR-QPVVILLGWGGCKDKNLAKYSAIYHKRGCIVIRYT-APWHMVF 76

Query: 639 -----PMKGSQLVAGDVLKFMASNENE-QPLVVHRVLDCWIHVGRSLLHVMNNRK 785
                 +   +++A  +L+ +   E E +PL+ H   +  + + R +L ++  R+
Sbjct: 77  FSESLGIPSLRVLAQKLLELLFDYEIEKEPLLFHVFSNGGVMLYRYVLELLQTRR 131


>AK026006-1|BAB15317.1|  277|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22353 fis, clone HRC06331. ).
          Length = 277

 Score = 36.3 bits (80), Expect = 0.13
 Identities = 25/115 (21%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
 Frame = +3

Query: 459 SQTNNGSENNETGPAKSRPLCIMINWLLARQKHVMKYATLYLEQGFDVLSVSCTPWQLMW 638
           SQ N+ S   +    + +P+ I++ W   + K++ KY+ +Y ++G  V+  +  PW +++
Sbjct: 19  SQKNSPSPGGKEAETR-QPVVILLGWGGCKDKNLAKYSAIYHKRGCIVIRYT-APWHMVF 76

Query: 639 -----PMKGSQLVAGDVLKFMASNENE-QPLVVHRVLDCWIHVGRSLLHVMNNRK 785
                 +   +++A  +L+ +   E E +PL+ H   +  + + R +L ++  R+
Sbjct: 77  FSESLGIPSLRVLAQKLLELLFDYEIEKEPLLFHVFSNGGVMLYRYVLELLQTRR 131


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,120,880
Number of Sequences: 237096
Number of extensions: 2281876
Number of successful extensions: 4741
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4741
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)