Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021052
         (802 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          24   1.4  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      24   1.4  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    22   5.8  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    22   5.8  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    22   5.8  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   5.8  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   5.8  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 682 SWLRTRMSSPSWCTGFSIA 738
           +W R RM+S  + T FSIA
Sbjct: 129 AWARLRMNSGMFTTAFSIA 147


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 682 SWLRTRMSSPSWCTGFSIA 738
           +W R RM+S  + T FSIA
Sbjct: 129 AWARLRMNSGMFTTAFSIA 147


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 390 W*ASSVRSFPGHHEEHS 440
           W  +   SFPG H+E S
Sbjct: 12  WFIACTHSFPGAHDEDS 28


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 390 W*ASSVRSFPGHHEEHS 440
           W  +   SFPG H+E S
Sbjct: 12  WFIACTHSFPGAHDEDS 28


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 390 W*ASSVRSFPGHHEEHS 440
           W  +   SFPG H+E S
Sbjct: 12  WFIACTHSFPGAHDEDS 28


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 627 QLMWPMKGSQLVAGDVL 677
           Q+ WP+K   +V GD++
Sbjct: 102 QMSWPVKKEAVVEGDLV 118


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 462 QTNNGSENNETGPAKSRP 515
           Q N  +EN++TG AK  P
Sbjct: 536 QYNTRAENHQTGTAKMGP 553


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,066
Number of Sequences: 438
Number of extensions: 4364
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)