Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021051
         (768 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.0  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   6.2  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   6.2  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +3

Query: 657  SSYRPPLLHQNQHYKSIWTFDLHAPY 734
            + Y  P+L QN  + ++ T+D H  +
Sbjct: 1571 AGYDVPVLAQNLDWVAVMTYDFHGQW 1596


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +1

Query: 28  NMTRNMTRLYFRPPLPKDSVSDPPSF 105
           N+T +     +R P P+   S PP +
Sbjct: 31  NLTTSKLLYTYRQPYPRQKKSHPPQW 56


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +3

Query: 459 FSTVKIVLRTCLCMEANSIRSLSV 530
           F   KIV  T LC EANS + L V
Sbjct: 304 FILAKIV--TDLCQEANSTKKLIV 325


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,869
Number of Sequences: 336
Number of extensions: 4428
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)