Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021051
         (768 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001394-1|AAN71149.1|  307|Drosophila melanogaster GH05569p pro...    29   5.3  
AJ295626-1|CAB99481.1|  511|Drosophila melanogaster lysyl oxidas...    29   5.3  
AE013599-3277|AAF46763.1|  511|Drosophila melanogaster CG4402-PA...    29   5.3  
BT001528-1|AAN71283.1|  600|Drosophila melanogaster RE05346p pro...    29   9.3  
AY095527-1|AAM12258.1|  620|Drosophila melanogaster RE18568p pro...    29   9.3  
AE014296-2325|AAF49786.2|  526|Drosophila melanogaster CG32137-P...    29   9.3  
AE014296-2324|AAF49787.2|  620|Drosophila melanogaster CG32137-P...    29   9.3  

>BT001394-1|AAN71149.1|  307|Drosophila melanogaster GH05569p
           protein.
          Length = 307

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +2

Query: 293 RSDPDWRYTAVRIFSKTQHKINEGSI-FGPWK 385
           R DP WRY + R+   T   IN G+  F P+K
Sbjct: 140 RDDPHWRYRSRRLLKFTAAAINAGNADFRPFK 171


>AJ295626-1|CAB99481.1|  511|Drosophila melanogaster lysyl
           oxidase-like 2 protein.
          Length = 511

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +2

Query: 293 RSDPDWRYTAVRIFSKTQHKINEGSI-FGPWK 385
           R DP WRY + R+   T   IN G+  F P+K
Sbjct: 344 RDDPHWRYRSRRLLKFTAAAINAGNADFRPFK 375


>AE013599-3277|AAF46763.1|  511|Drosophila melanogaster CG4402-PA
           protein.
          Length = 511

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +2

Query: 293 RSDPDWRYTAVRIFSKTQHKINEGSI-FGPWK 385
           R DP WRY + R+   T   IN G+  F P+K
Sbjct: 344 RDDPHWRYRSRRLLKFTAAAINAGNADFRPFK 375


>BT001528-1|AAN71283.1|  600|Drosophila melanogaster RE05346p
           protein.
          Length = 600

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 24/89 (26%), Positives = 34/89 (38%)
 Frame = -3

Query: 298 RTICVRLDDSLSLVGSCEYSLRLIHSTKRSG*KGTL*LGCRL*ARHRDENRNVPRTSSEG 119
           R + +  ++  SL  S E S   IH  +R   +    L   L A  R +  N   +   G
Sbjct: 254 RRLQIAQEEKESLTSSLEESSDRIHMLERHAREQETKLKTTLQALERSQRENNVLSERLG 313

Query: 118 ESL*GRKEGRKRSLLAMEAESKVGSYFES 32
                   GRK     ME +   GSY E+
Sbjct: 314 ADTNSSTPGRKSLQFEMECDEDDGSYTET 342


>AY095527-1|AAM12258.1|  620|Drosophila melanogaster RE18568p
           protein.
          Length = 620

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 24/89 (26%), Positives = 34/89 (38%)
 Frame = -3

Query: 298 RTICVRLDDSLSLVGSCEYSLRLIHSTKRSG*KGTL*LGCRL*ARHRDENRNVPRTSSEG 119
           R + +  ++  SL  S E S   IH  +R   +    L   L A  R +  N   +   G
Sbjct: 274 RRLQIAQEEKESLTSSLEESSDRIHMLERHAREQETKLETTLQALERSQRENNVLSERLG 333

Query: 118 ESL*GRKEGRKRSLLAMEAESKVGSYFES 32
                   GRK     ME +   GSY E+
Sbjct: 334 ADTNSSTPGRKSLQFEMECDEDDGSYTET 362


>AE014296-2325|AAF49786.2|  526|Drosophila melanogaster CG32137-PA,
           isoform A protein.
          Length = 526

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 24/89 (26%), Positives = 34/89 (38%)
 Frame = -3

Query: 298 RTICVRLDDSLSLVGSCEYSLRLIHSTKRSG*KGTL*LGCRL*ARHRDENRNVPRTSSEG 119
           R + +  ++  SL  S E S   IH  +R   +    L   L A  R +  N   +   G
Sbjct: 180 RRLQIAQEEKESLTSSLEESSDRIHMLERHAREQETKLETTLQALERSQRENNVLSERLG 239

Query: 118 ESL*GRKEGRKRSLLAMEAESKVGSYFES 32
                   GRK     ME +   GSY E+
Sbjct: 240 ADTNSSTPGRKSLQFEMECDEDDGSYTET 268


>AE014296-2324|AAF49787.2|  620|Drosophila melanogaster CG32137-PB,
           isoform B protein.
          Length = 620

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 24/89 (26%), Positives = 34/89 (38%)
 Frame = -3

Query: 298 RTICVRLDDSLSLVGSCEYSLRLIHSTKRSG*KGTL*LGCRL*ARHRDENRNVPRTSSEG 119
           R + +  ++  SL  S E S   IH  +R   +    L   L A  R +  N   +   G
Sbjct: 274 RRLQIAQEEKESLTSSLEESSDRIHMLERHAREQETKLETTLQALERSQRENNVLSERLG 333

Query: 118 ESL*GRKEGRKRSLLAMEAESKVGSYFES 32
                   GRK     ME +   GSY E+
Sbjct: 334 ADTNSSTPGRKSLQFEMECDEDDGSYTET 362


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,012,681
Number of Sequences: 53049
Number of extensions: 870656
Number of successful extensions: 2099
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2099
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3540671772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)