Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021051
         (768 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U13019-9|AAC24447.1|  434|Caenorhabditis elegans Hypothetical pr...    30   1.6  
L11247-9|AAK84522.2|  639|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AC024751-3|AAK21513.2|  440|Caenorhabditis elegans Hypothetical ...    30   2.1  
U80028-6|AAQ01536.1|  365|Caenorhabditis elegans Serpentine rece...    29   2.8  
AF067950-6|AAG24156.2|  372|Caenorhabditis elegans Serpentine re...    29   2.8  
Z68161-10|CAN86582.1|  705|Caenorhabditis elegans Hypothetical p...    29   3.6  
Z68161-8|CAH60763.1|  625|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z68161-5|CAA92299.2|  764|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z68161-4|CAD89735.1|  781|Caenorhabditis elegans Hypothetical pr...    29   3.6  
AY185494-1|AAO26317.1|  764|Caenorhabditis elegans poly ADP-ribo...    29   3.6  
AY185493-1|AAO26316.1|  781|Caenorhabditis elegans poly ADP-ribo...    29   3.6  
Z34801-4|CAA84328.1|  236|Caenorhabditis elegans Hypothetical pr...    28   6.4  
AL117195-25|CAB55036.1| 1048|Caenorhabditis elegans Hypothetical...    28   6.4  
AF016433-6|AAB65391.1|  335|Caenorhabditis elegans Seven tm rece...    28   6.4  
AL132898-3|CAC14412.1|  346|Caenorhabditis elegans Hypothetical ...    28   8.4  
AL132898-2|CAC14413.1|  349|Caenorhabditis elegans Hypothetical ...    28   8.4  

>U13019-9|AAC24447.1|  434|Caenorhabditis elegans Hypothetical
           protein T12A2.8 protein.
          Length = 434

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +1

Query: 223 NVSISMSTHSFQQDSSCHPSERKSFGSRLAVHCCPHIFKNSA 348
           N++ S S H  +  +   P +R+SFG     +   H++K +A
Sbjct: 77  NINASSSAHESKDQNEFVPRKRRSFGDSPFTNLVDHVYKTNA 118


>L11247-9|AAK84522.2|  639|Caenorhabditis elegans Hypothetical
           protein F09G8.8 protein.
          Length = 639

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -2

Query: 554 NGFRWDEANRERSYGVGLHTQTSSEDDLYC 465
           N FRW+  +    YG GL  + + + D YC
Sbjct: 605 NDFRWNSVSCTSEYGRGLCQEAACDTDFYC 634


>AC024751-3|AAK21513.2|  440|Caenorhabditis elegans Hypothetical
           protein Y18H1A.10 protein.
          Length = 440

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
 Frame = -1

Query: 672 EVYKMRWNGKP--LHFLPFQNNG 610
           EV+   WNG+P  +  LPF+NNG
Sbjct: 118 EVFSTVWNGRPVAIKVLPFENNG 140


>U80028-6|AAQ01536.1|  365|Caenorhabditis elegans Serpentine
           receptor, class w protein123 protein.
          Length = 365

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
 Frame = +3

Query: 210 DLFVECINLNEYSQLPTRLKLSSKRTQIVRIPTGGTLLSAYFQKLSIKS-TKAQFSALGK 386
           D+F EC++L+ Y  + T+  L+  +    R  T      A+ + L I++   +++ ALGK
Sbjct: 98  DIFFECLSLDTYGLVLTKALLTVVKDYSRRCSTWLIFFIAFIRTLIIQNPLSSKYEALGK 157


>AF067950-6|AAG24156.2|  372|Caenorhabditis elegans Serpentine
           receptor, class w protein122 protein.
          Length = 372

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
 Frame = +3

Query: 210 DLFVECINLNEYSQLPTRLKLSSKRTQIVRIPTGGTLLSAYFQKLSIKS-TKAQFSALGK 386
           D+F EC++L+ Y  + T+  L+  +    R  T      A+ + L I++   +++ ALGK
Sbjct: 98  DIFFECLSLDTYGLVLTKALLTVVKDYSRRCSTWLIFFIAFIRTLIIQNPLSSKYEALGK 157


>Z68161-10|CAN86582.1|  705|Caenorhabditis elegans Hypothetical
           protein F20C5.1d protein.
          Length = 705

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = +2

Query: 275 IQANANRSDPD--WRYTAVRIFSKTQHKINEGSIFGP 379
           +Q + N+ DPD  +RY  +  F  +Q K+ E + +GP
Sbjct: 284 LQPDLNKVDPDRNYRYCTIPNFPASQGKLREDNRYGP 320


>Z68161-8|CAH60763.1|  625|Caenorhabditis elegans Hypothetical
           protein F20C5.1c protein.
          Length = 625

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = +2

Query: 275 IQANANRSDPD--WRYTAVRIFSKTQHKINEGSIFGP 379
           +Q + N+ DPD  +RY  +  F  +Q K+ E + +GP
Sbjct: 128 LQPDLNKVDPDRNYRYCTIPNFPASQGKLREDNRYGP 164


>Z68161-5|CAA92299.2|  764|Caenorhabditis elegans Hypothetical
           protein F20C5.1b protein.
          Length = 764

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = +2

Query: 275 IQANANRSDPD--WRYTAVRIFSKTQHKINEGSIFGP 379
           +Q + N+ DPD  +RY  +  F  +Q K+ E + +GP
Sbjct: 267 LQPDLNKVDPDRNYRYCTIPNFPASQGKLREDNRYGP 303


>Z68161-4|CAD89735.1|  781|Caenorhabditis elegans Hypothetical
           protein F20C5.1a protein.
          Length = 781

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = +2

Query: 275 IQANANRSDPD--WRYTAVRIFSKTQHKINEGSIFGP 379
           +Q + N+ DPD  +RY  +  F  +Q K+ E + +GP
Sbjct: 284 LQPDLNKVDPDRNYRYCTIPNFPASQGKLREDNRYGP 320


>AY185494-1|AAO26317.1|  764|Caenorhabditis elegans poly ADP-ribose
           metabolism enzyme-3 short form protein.
          Length = 764

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = +2

Query: 275 IQANANRSDPD--WRYTAVRIFSKTQHKINEGSIFGP 379
           +Q + N+ DPD  +RY  +  F  +Q K+ E + +GP
Sbjct: 267 LQPDLNKVDPDRNYRYCTIPNFPASQGKLREDNRYGP 303


>AY185493-1|AAO26316.1|  781|Caenorhabditis elegans poly ADP-ribose
           metabolism enzyme-3 long form protein.
          Length = 781

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = +2

Query: 275 IQANANRSDPD--WRYTAVRIFSKTQHKINEGSIFGP 379
           +Q + N+ DPD  +RY  +  F  +Q K+ E + +GP
Sbjct: 284 LQPDLNKVDPDRNYRYCTIPNFPASQGKLREDNRYGP 320


>Z34801-4|CAA84328.1|  236|Caenorhabditis elegans Hypothetical
           protein F59A2.3 protein.
          Length = 236

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +1

Query: 73  PKDSVSDPPSFLTDFLL-LTKSLAHFCFHLYVEPINDIP 186
           P  +V+  P  +  F + +TK     CFHL + P++D P
Sbjct: 112 PSQAVAPVPVAMPPFTVEITKGDQRLCFHLELVPVDDQP 150


>AL117195-25|CAB55036.1| 1048|Caenorhabditis elegans Hypothetical
           protein Y57A10A.31 protein.
          Length = 1048

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = -1

Query: 171 RLDIEMKTEMCQGLRQKEKVCKE--GRRVGNGVFWQWRPKVKSGHISSHVW 25
           +LD +++   C   +Q++ +  +   +     +F +W P  KSG I  H W
Sbjct: 583 QLDAKLRATFCMLTKQEDPIMMQDDAQYYVVRIFEEWTPNSKSGVIGVHGW 633


>AF016433-6|AAB65391.1|  335|Caenorhabditis elegans Seven tm
           receptor protein 131 protein.
          Length = 335

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
 Frame = +1

Query: 169 PINDIPIIKFLFS----PTFSLNVSISMSTHSFQQDSSCHPSERKSF-GSRLAVHCCPHI 333
           PI ++PI  FLF+     +F L +S+  +   ++  + C P       G RLA+   P I
Sbjct: 79  PIRNVPIFGFLFTCLFGSSFGLCISLLSTQFFYRYLAVCRPKSLHYLEGRRLALIFIPAI 138

Query: 334 F 336
           F
Sbjct: 139 F 139


>AL132898-3|CAC14412.1|  346|Caenorhabditis elegans Hypothetical
           protein Y59A8B.4 protein.
          Length = 346

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +1

Query: 490 VCVWRPTPYDLSRFASSHLKPL 555
           +C+WR + Y+L  FA S L P+
Sbjct: 1   MCLWRNSTYELDTFAPSVLHPI 22


>AL132898-2|CAC14413.1|  349|Caenorhabditis elegans Hypothetical
           protein Y59A8B.3 protein.
          Length = 349

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +1

Query: 490 VCVWRPTPYDLSRFASSHLKPL 555
           +C+WR + Y+L  FA S L P+
Sbjct: 1   MCLWRNSTYELDTFAPSVLHPI 22


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,305,514
Number of Sequences: 27780
Number of extensions: 437090
Number of successful extensions: 1170
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1170
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)