Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021050
(777 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23C4.12 |hhp2||serine/threonine protein kinase Hhp2 |Schizos... 37 0.003
SPCC320.13c |ark1|aim1, SPCC330.16|aurora-B kinase Ark1|Schizosa... 36 0.009
SPBC3H7.15 |hhp1||serine/threonine protein kinase Hhp1|Schizosac... 34 0.020
SPBC1D7.05 |byr2|ste8, SPBC2F12.01|MAP kinase kinase kinase Byr2... 31 0.14
SPAC1805.05 |cki3||serine/threonine protein kinase Cki3|Schizosa... 30 0.43
SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr 1||... 29 0.56
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 29 0.98
SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16 |S... 28 1.3
SPCC1450.11c |cek1||serine/threonine protein kinase Cek1|Schizos... 28 1.7
SPAC19E9.02 |fin1||serine/threonine protein kinase Fin1|Schizosa... 27 2.3
SPBP35G2.05c |cki2||serine/threonine protein kinase Cki2|Schizos... 27 4.0
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 26 5.2
SPBC1347.06c |cki1||serine/threonine protein kinase Cki1|Schizos... 26 5.2
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 26 6.9
SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr ... 26 6.9
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 26 6.9
SPAC11E3.11c |||guanyl-nucleotide exchange factor |Schizosacchar... 25 9.2
SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1 |Schizosacch... 25 9.2
SPBC725.06c |ppk31|mug25|serine/threonine protein kinase Ppk31 |... 25 9.2
>SPAC23C4.12 |hhp2||serine/threonine protein kinase Hhp2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 400
Score = 37.1 bits (82), Expect = 0.003
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +2
Query: 371 DIQL-KKWRIGKPIGRGSFGRIYLASDDVDNEVTKFNARYVVKIEP 505
DI++ K+RIG+ IG GSFG+IYL + V+ E + VK+EP
Sbjct: 5 DIKIGNKYRIGRKIGSGSFGQIYLGLNTVNGE------QVAVKLEP 44
>SPCC320.13c |ark1|aim1, SPCC330.16|aurora-B kinase
Ark1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 35.5 bits (78), Expect = 0.009
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 356 GIVFTDIQLKKWRIGKPIGRGSFGRIYLASD 448
G + + + + IGKP+G+G FGR+YLA +
Sbjct: 78 GPQWREFHIGMFEIGKPLGKGKFGRVYLAKE 108
>SPBC3H7.15 |hhp1||serine/threonine protein kinase
Hhp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 365
Score = 34.3 bits (75), Expect = 0.020
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +2
Query: 386 KWRIGKPIGRGSFGRIYLASDDVDNE 463
K+RIG+ IG GSFG IYL ++ V E
Sbjct: 10 KYRIGRKIGSGSFGDIYLGTNVVSGE 35
>SPBC1D7.05 |byr2|ste8, SPBC2F12.01|MAP kinase kinase kinase
Byr2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 659
Score = 31.5 bits (68), Expect = 0.14
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 368 TDIQLKKWRIGKPIGRGSFGRIYLASDDVDNEV 466
TD Q KW G IG GSFG++YL + E+
Sbjct: 387 TDDQSIKWIRGALIGSGSFGQVYLGMNASSGEL 419
>SPAC1805.05 |cki3||serine/threonine protein kinase
Cki3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 439
Score = 29.9 bits (64), Expect = 0.43
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 389 WRIGKPIGRGSFGRIYLASDDVDNE--VTKFNAR 484
+R+GK IG GSFG ++ + ++N+ KF +R
Sbjct: 15 YRVGKKIGEGSFGMLFQGVNLINNQPIALKFESR 48
>SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1116
Score = 29.5 bits (63), Expect = 0.56
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 338 DEALPPGIVFTDIQLKKWRIGKPIGRGSFGRIYLA 442
D + G V + KW G+ IG G++G+++LA
Sbjct: 808 DTTITSGSVVSQNATFKWMKGELIGNGTYGKVFLA 842
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 28.7 bits (61), Expect = 0.98
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 380 LKKWRIGKPIGRGSFGRIYLASDDVDNEV 466
++ + I KPI +G+FG +YL+ + E+
Sbjct: 561 IQDYEIIKPISKGTFGTVYLSRKNTTGEI 589
>SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 672
Score = 28.3 bits (60), Expect = 1.3
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 389 WRIGKPIGRGSFGRIYLASDDVDN 460
+RI +G GSFG++YLA+ + N
Sbjct: 31 YRIESVVGEGSFGKVYLAAHLLTN 54
>SPCC1450.11c |cek1||serine/threonine protein kinase
Cek1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1338
Score = 27.9 bits (59), Expect = 1.7
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 380 LKKWRIGKPIGRGSFGRIYLA 442
+ ++I KPI +G+FG +YLA
Sbjct: 586 INDYKILKPISKGAFGSVYLA 606
>SPAC19E9.02 |fin1||serine/threonine protein kinase
Fin1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 722
Score = 27.5 bits (58), Expect = 2.3
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +2
Query: 380 LKKWRIGKPIGRGSFGRIY 436
++K++I + IG GSFGRIY
Sbjct: 1 MEKYKILECIGHGSFGRIY 19
>SPBP35G2.05c |cki2||serine/threonine protein kinase
Cki2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 435
Score = 26.6 bits (56), Expect = 4.0
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +2
Query: 389 WRIGKPIGRGSFGRIYLASDDVDNEV 466
+R+G+ IG GSFG I+ + ++N++
Sbjct: 12 YRVGRKIGEGSFGVIFDGMNLLNNQL 37
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 26.2 bits (55), Expect = 5.2
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 637 FTDENSGVKYRFLVLPRYDVDLHKI-ISRTRVLDLKNVLV 753
F E +G+K R +VLP V+L + + + D K+VLV
Sbjct: 124 FVSEKTGIKKRKIVLPSNVVELDSLNFDKVVMDDKKDVLV 163
>SPBC1347.06c |cki1||serine/threonine protein kinase
Cki1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 26.2 bits (55), Expect = 5.2
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 389 WRIGKPIGRGSFGRIYLASDDVDNE--VTKFNAR 484
+++G+ IG GSFG I+ ++ ++N+ KF R
Sbjct: 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPR 45
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.8 bits (54), Expect = 6.9
Identities = 18/65 (27%), Positives = 32/65 (49%)
Frame = +2
Query: 302 DETSSLDVSFCDDEALPPGIVFTDIQLKKWRIGKPIGRGSFGRIYLASDDVDNEVTKFNA 481
DE +S + F DDE +V D ++ + +G+GSFG++ +D E K A
Sbjct: 671 DENTSSNFGF-DDERGDYKVVLGDHIAYRYEVVDFLGKGSFGQVLRC---IDYETGKLVA 726
Query: 482 RYVVK 496
+++
Sbjct: 727 LKIIR 731
>SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 513
Score = 25.8 bits (54), Expect = 6.9
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 344 PRRHRNSRPDWRFHPL 297
PR HR + PD+ F PL
Sbjct: 155 PRTHRGTHPDYPFKPL 170
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase kinase
Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 25.8 bits (54), Expect = 6.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 386 KWRIGKPIGRGSFGRIYLA 442
+W+ G IG GSFG +Y A
Sbjct: 1119 RWQQGGLIGSGSFGTVYRA 1137
>SPAC11E3.11c |||guanyl-nucleotide exchange factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 942
Score = 25.4 bits (53), Expect = 9.2
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 432 ILPKLPLPMGFPIRHFLS*MSVNTIPGGNASSSQKLTSRLEVSSS 298
I P P P+R S + IP G + S++ + S L +S+S
Sbjct: 143 ITSSTPTPSQLPVRPSTSLSFFDDIPLGPSFSAETILSSLSISTS 187
>SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 297
Score = 25.4 bits (53), Expect = 9.2
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 230 WNAAAGTRFVQLPLHPKKKVKTLEDETS 313
W+AA G V+ + P K ++ LE+ TS
Sbjct: 33 WDAATGQLIVKGSVSPSKVLRRLENATS 60
>SPBC725.06c |ppk31|mug25|serine/threonine protein kinase Ppk31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1032
Score = 25.4 bits (53), Expect = 9.2
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 368 TDIQLKKWRIGKPIGRGSFGRIYLA 442
T L ++ + K I RG++GR+YLA
Sbjct: 521 TPHSLDEFILLKEINRGAYGRVYLA 545
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,148,596
Number of Sequences: 5004
Number of extensions: 66909
Number of successful extensions: 208
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 208
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 375345278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -