Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021050
         (777 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       25   2.6  
AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposa...    23   8.0  

>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = +2

Query: 260 QLPLHPKKKVKTLEDETSSLDVSFCDDEALPPGIVFTDIQ 379
           ++ L P ++++   D    +   +CD  A PP I F D +
Sbjct: 58  EVSLEPGQRIRRELDPCCEILRLYCDTSACPPLIEFCDAE 97


>AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposase
           protein.
          Length = 336

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +2

Query: 209 YSKVIVCWNAAAGTRFVQLPLHP 277
           YSKV+  W A  G  FV   L+P
Sbjct: 245 YSKVVREWYAEKGVLFVPKNLNP 267


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 785,483
Number of Sequences: 2352
Number of extensions: 15909
Number of successful extensions: 39
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)