Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021049
         (730 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   1.9  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   1.9  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   4.4  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   5.8  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   7.7  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +3

Query: 168 LLTFLLTTASSVLLFTLGYYYIDIR*QDGGLLEQSIL 278
           +LT +LT A+  LLF L Y Y  I+     L+  S L
Sbjct: 3   VLTTVLTAAAVFLLFYLFYCYKTIKQHIYSLISLSYL 39


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +3

Query: 168 LLTFLLTTASSVLLFTLGYYYIDIR*QDGGLLEQSIL 278
           +LT +LT A+  LLF L Y Y  I+     L+  S L
Sbjct: 3   VLTTVLTAAAVFLLFYLFYCYKTIKQHIYSLISLSYL 39


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -1

Query: 673 IHILVGSYLDLDLL*SIPLQMLELFH*FLQFAPL 572
           +H L  +Y  +DL  ++    L+L H  +QF+ L
Sbjct: 324 LHELRNNYFHMDLENNVQSYSLQLLHQKVQFSVL 357


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 728 NCSISLTCFSDSFNVVS 678
           +CS+  TC SD   +VS
Sbjct: 454 DCSVYYTCVSDGSKLVS 470


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 326 EELSTTKTKLAGIEDNSF 379
           EEL  +  +L  + DNSF
Sbjct: 45  EELDLSNNRLRNVPDNSF 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,247
Number of Sequences: 336
Number of extensions: 3162
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)