Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021049
(730 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 38 0.002
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 38 0.002
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 32 0.073
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 31 0.17
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 31 0.17
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 31 0.22
SPAC27E2.07 |pvg2|mug53|galactose residue biosynthesis protein P... 30 0.39
SPAC20G8.10c ||SPAC3A12.01c|beclin family protein|Schizosaccharo... 30 0.39
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.68
SPAC1002.10c |sgt1||SGT1 family transcriptional regulator Sgt1|S... 29 0.90
SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein Ndc80|... 28 1.2
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 28 1.2
SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2 |Schiz... 28 1.6
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 27 2.7
SPAC1783.07c |pap1|caf3, caf3|transcription factor Caf3|Schizosa... 26 4.8
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 26 4.8
SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subun... 26 4.8
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 26 6.3
SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces po... 26 6.3
SPBC16C6.05 |||translation initiation factor |Schizosaccharomyce... 26 6.3
SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces ... 26 6.3
SPCC338.07c |||NatA N-acetyltransferase complex subunit |Schizos... 26 6.3
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 25 8.4
SPAP27G11.04c |||tRNA specific adenosine deaminase subunit Tad3 ... 25 8.4
SPCC330.04c |mug135||DUF1773 family protein 3|Schizosaccharomyce... 25 8.4
SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces pomb... 25 8.4
SPBC25B2.09c |||arginine-tRNA ligase|Schizosaccharomyces pombe|c... 25 8.4
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 37.5 bits (83), Expect = 0.002
Identities = 21/80 (26%), Positives = 44/80 (55%)
Frame = +2
Query: 308 ECEILKEELSTTKTKLAGIEDNSFGMDDMVQSLKEEINEMKAQNDRLRHSLDDNEKLLRV 487
E E+L + LS TKT+L+ ++ + G+D ++ E++ + + R +L+ + L++
Sbjct: 730 EIELLDKRLSETKTELSDLQGDLQGLDIRKDEIQSELDTLYLR----RANLEKLQLLVKD 785
Query: 488 SENTAEEFRTLSAKWRILSV 547
N EE RT+ + +L +
Sbjct: 786 ISNLEEEIRTIDRETEVLRI 805
Score = 29.5 bits (63), Expect = 0.51
Identities = 13/69 (18%), Positives = 36/69 (52%)
Frame = +2
Query: 326 EELSTTKTKLAGIEDNSFGMDDMVQSLKEEINEMKAQNDRLRHSLDDNEKLLRVSENTAE 505
EEL T+ A ++D F + + I +++Q+D + +++D + + +++ ++E
Sbjct: 240 EELDQEITETARLQDELFKSTEEYEQQMITIRHLESQSDIINTTINDLKSQMTITDESSE 299
Query: 506 EFRTLSAKW 532
+ L + +
Sbjct: 300 DLEKLHSNF 308
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 37.5 bits (83), Expect = 0.002
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +2
Query: 269 INSLQRDLLFTTKECEILKEELSTTKTKLAGIEDNSFGMDDMVQSLKEEINEMKAQNDRL 448
I SL+ +LL K E+LKEE ++ +LA +++ D S K++ ++++ DR+
Sbjct: 1005 ITSLRSELLDLNKRVEVLKEEKESSSKELAKQLEDAVREKDSALSFKKDYEKIRSDADRV 1064
Query: 449 RHSL-DDNEK 475
SL +D EK
Sbjct: 1065 ITSLKEDIEK 1074
Score = 30.7 bits (66), Expect = 0.22
Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 5/107 (4%)
Frame = +2
Query: 305 KECEILKEELSTTKTKLAGIEDNSFGMDDMVQSLKEEINEMK-----AQNDRLRHSLDDN 469
K CE L++E +TKL + V SL EE+ +K A R + N
Sbjct: 1359 KNCEALEKEKQELETKLQETAKETDTFKQQVNSLNEEVENLKKEVEQANTKNTRLAAAWN 1418
Query: 470 EKLLRVSENTAEEFRTLSAKWRILSVSFWLKELT*RSKLQKSMEKLK 610
EK + +++ F L + + K +QK +E LK
Sbjct: 1419 EKCENLKKSSLTRFAHLKQELTNKNKELTSKNAE-NEAMQKEIESLK 1464
Score = 27.5 bits (58), Expect = 2.1
Identities = 19/89 (21%), Positives = 40/89 (44%)
Frame = +2
Query: 392 MVQSLKEEINEMKAQNDRLRHSLDDNEKLLRVSENTAEEFRTLSAKWRILSVSFWLKELT 571
M++ + +++ + D R + +NEKLL ++ T ++ + + + L
Sbjct: 615 MLEEVSDQLRYSLKERDFFRSLVQENEKLLDMAPATPNS----KLNTNLIEQTSYQRSLI 670
Query: 572 *RSKLQKSMEKLKHLKRN*SQ*VEIEITS 658
+L +E LK + RN + E I+S
Sbjct: 671 RLEQLTNELESLKSISRNKEKKFEEAISS 699
Score = 26.6 bits (56), Expect = 3.6
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +2
Query: 383 MDDMVQSLKEEINEMKAQNDRLRHSLDDNEKLLRVSENTAEEFRTLSA 526
M+D + SLK+ I ++ QN L D + + V + + E +SA
Sbjct: 1142 MEDEISSLKDYILGLENQNKLLHSQFDSLSQQITVLQQNSSENLNISA 1189
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 32.3 bits (70), Expect = 0.073
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = +2
Query: 266 TINSLQRDLLFTTKECEILKEELSTTKTKLAGIEDNSFGMDDMVQSLKEEINEMKAQNDR 445
++ SLQRD+L K+ E+ + +L+ K +L NS + + +L E A N+
Sbjct: 512 SLQSLQRDILNEKKKHEVYESQLNELKGELQTEISNSEHLSSQLSTLAAEKEAAVATNNE 571
Query: 446 LRHSLDDNEKL 478
L S + + L
Sbjct: 572 LSESKNSLQTL 582
Score = 31.9 bits (69), Expect = 0.096
Identities = 12/38 (31%), Positives = 26/38 (68%)
Frame = +1
Query: 475 TVASIRKYCRGVQNTLSEVENTLSELLAERANLEEQIA 588
+VAS++K C+ NT+ +++ L+ + A A LE++++
Sbjct: 1654 SVASLQKECKIKSNTVESLQDVLTSVQARNAELEDEVS 1691
Score = 25.8 bits (54), Expect = 6.3
Identities = 12/68 (17%), Positives = 35/68 (51%)
Frame = +1
Query: 526 EVENTLSELLAERANLEEQIAEINGKAQAFEEELITVSRDRDNFQLKYVSAETTLKESEK 705
E+EN + + + ++ ++ + FE++ T+S + ++ + K + E + K K
Sbjct: 620 ELENNHQTITKQLKDTSSKLQQLQLERANFEQKESTLSDENNDLRTKLLKLEESNKSLIK 679
Query: 706 QVKEIEQL 729
+ ++++ L
Sbjct: 680 KQEDVDSL 687
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 31.1 bits (67), Expect = 0.17
Identities = 19/92 (20%), Positives = 43/92 (46%)
Frame = +2
Query: 257 LIGTINSLQRDLLFTTKECEILKEELSTTKTKLAGIEDNSFGMDDMVQSLKEEINEMKAQ 436
L+ + SLQ D ++ E+ ++ + KLAG+ + +++ +Q L E+ +
Sbjct: 201 LVSDLASLQSDHSKVCEKLEVSSRQVQDLEKKLAGLAQQNTELNEKIQ-LFEQKRSNYSS 259
Query: 437 NDRLRHSLDDNEKLLRVSENTAEEFRTLSAKW 532
+ + L+ + ++ E E + L+A W
Sbjct: 260 DGNISKILETDPTSIKELEEEVETQKRLTALW 291
Score = 31.1 bits (67), Expect = 0.17
Identities = 23/84 (27%), Positives = 41/84 (48%)
Frame = +1
Query: 478 VASIRKYCRGVQNTLSEVENTLSELLAERANLEEQIAEINGKAQAFEEELITVSRDRDNF 657
+AS++ V L + +L + A L +Q E+N K Q FE++ S D N
Sbjct: 205 LASLQSDHSKVCEKLEVSSRQVQDLEKKLAGLAQQNTELNEKIQLFEQKRSNYSSD-GNI 263
Query: 658 QLKYVSAETTLKESEKQVKEIEQL 729
+ T++KE E++V+ ++L
Sbjct: 264 SKILETDPTSIKELEEEVETQKRL 287
Score = 29.1 bits (62), Expect = 0.68
Identities = 15/72 (20%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +2
Query: 308 ECEILKEELSTTKTKLAGIEDNSFGMDDMVQSLKEEINEMKAQNDRLRHSLDD-NEKLLR 484
E +LKE L+T+++ + ++ +DD ++S+ E E++ + R+ + E L +
Sbjct: 609 ERNLLKEMLATSRSSILSHNSSAGNIDDKMKSIDESTRELEKNYEVYRNEMTAIQESLSK 668
Query: 485 VSENTAEEFRTL 520
+++ E +
Sbjct: 669 RNQDLLSEMEAI 680
Score = 28.7 bits (61), Expect = 0.90
Identities = 12/64 (18%), Positives = 36/64 (56%)
Frame = +2
Query: 308 ECEILKEELSTTKTKLAGIEDNSFGMDDMVQSLKEEINEMKAQNDRLRHSLDDNEKLLRV 487
EC++ ++ + +++NS + + +++L+ E+N K +N+ L + + +++L
Sbjct: 560 ECDVEIQKQTVQYQISNAVKENSNTLSEQIKNLESELNSSKIKNESLLNERNLLKEMLAT 619
Query: 488 SENT 499
S ++
Sbjct: 620 SRSS 623
Score = 26.2 bits (55), Expect = 4.8
Identities = 12/66 (18%), Positives = 32/66 (48%)
Frame = +2
Query: 317 ILKEELSTTKTKLAGIEDNSFGMDDMVQSLKEEINEMKAQNDRLRHSLDDNEKLLRVSEN 496
+L E + + L E+ + + +++LK ++ + ++L L + ++ EN
Sbjct: 1234 LLNESNKSLRENLERNEEVITELREKIETLKTDLANFRLNKEQLESQLQTEKAAVKKLEN 1293
Query: 497 TAEEFR 514
+ EE++
Sbjct: 1294 SNEEYK 1299
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 31.1 bits (67), Expect = 0.17
Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 2/96 (2%)
Frame = -2
Query: 567 SSFSQKLTESILHFAESVLNSSAVFSDTRNXXXXXXXXXXXXXFCAFISLISSFSDCTIS 388
S+FS T S + S+ +SS + S + L SS S IS
Sbjct: 601 STFSSASTSSPSSISSSISSSSTILSSPTPSTSSLMISSSSIISGSSSILSSSISTIPIS 660
Query: 387 SMPNELSS--IPANFVLVVESSSFKISHSLVVNNKS 286
S + SS IP++ LV SSS +S S V ++ S
Sbjct: 661 SSLSTYSSSVIPSSSTLVSSSSSLIVSSSPVASSSS 696
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 30.7 bits (66), Expect = 0.22
Identities = 21/86 (24%), Positives = 39/86 (45%)
Frame = +2
Query: 269 INSLQRDLLFTTKECEILKEELSTTKTKLAGIEDNSFGMDDMVQSLKEEINEMKAQNDRL 448
I+ +R+LL+ CE ++EE KL E + ++ E++ N +L
Sbjct: 392 IDECRRNLLWAESSCETIREENQKNIKKLNDAESLKSRLLQSRTQMQTELDSYITSNSQL 451
Query: 449 RHSLDDNEKLLRVSENTAEEFRTLSA 526
+ + ++ VSE+ AE R S+
Sbjct: 452 KDEITSLKQ--TVSESEAERKRLFSS 475
Score = 27.9 bits (59), Expect = 1.6
Identities = 32/123 (26%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
Frame = +2
Query: 293 LFTTKECEILKEELSTTKTKLAGIEDNSFGMDDMVQSLKEEINEMKAQNDRLRHSLDDNE 472
L T K E L ++L ++ L ++NS +SLK ++ + +L++ +D+
Sbjct: 340 LETPKLVEELTKQLHVAESTL---KENSEKFKQNSESLKSRVDNLNDYITKLQNEIDECR 396
Query: 473 KLLRVSENTAEEFRTLSAK-WRILSVSFWLKELT*RSKLQKSMEKLKHLKRN*SQ*VEIE 649
+ L +E++ E R + K + L+ + LK +S+ Q E ++ N SQ ++ E
Sbjct: 397 RNLLWAESSCETIREENQKNIKKLNDAESLKSRLLQSRTQMQTELDSYITSN-SQ-LKDE 454
Query: 650 ITS 658
ITS
Sbjct: 455 ITS 457
Score = 25.8 bits (54), Expect = 6.3
Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 395 VQSLKEEINEMKAQNDRLRHSLDDN-EKL 478
V+ L E+N+++ + L+H +D EKL
Sbjct: 107 VRRLSHEVNDLQTDRENLKHQFEDQIEKL 135
>SPAC27E2.07 |pvg2|mug53|galactose residue biosynthesis protein
Pvg2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 389
Score = 29.9 bits (64), Expect = 0.39
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +2
Query: 260 IGTINSLQRDLLFTTKECEILKEELSTTKTKLAGIEDNSFGMDDMVQSLK 409
+G IN +R LFT + E+ ++EL +KT I + MDD+ QS K
Sbjct: 39 LGGINFYKRTNLFTVE--ELGEKELELSKTVTIDIYRKAMCMDDLEQSRK 86
>SPAC20G8.10c ||SPAC3A12.01c|beclin family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 464
Score = 29.9 bits (64), Expect = 0.39
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +2
Query: 365 EDNSFGMDDMVQSLKEEINEMKAQNDRLRHSLDDNEKLLRVSENTAEE 508
E+N+ +D + L ++INE + + + + D +KLLR + E+
Sbjct: 182 EENTAALDSEIDELMKQINEKEEKIEEISDETDKLQKLLRELDEEKEK 229
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 29.1 bits (62), Expect = 0.68
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +2
Query: 326 EELSTTKTKLAGIEDNSFGMDDMVQSLKEEINEMKAQNDRLRHSLDDNE-KLLRVSENTA 502
+E + ++ + D + D ++ LKE IN++ + L+ + DD+E K VS+ A
Sbjct: 144 QEKDELEKQVKTLHDLNEQKDKKIKELKERINDLTYDYETLKANADDSEGKQTLVSKREA 203
Query: 503 --EEFRT 517
EEF++
Sbjct: 204 ALEEFQS 210
>SPAC1002.10c |sgt1||SGT1 family transcriptional regulator
Sgt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 590
Score = 28.7 bits (61), Expect = 0.90
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
Frame = +3
Query: 63 VMGIDEETRVLFTSAGDACY-----TENYCDGQSNTNKNRLLTFLLT 188
++ + ++ + L +SA +A Y ENYCD S N+N L+T +T
Sbjct: 217 IVHVLQKNKNLISSAVNAFYYRDPIDENYCDRMSKFNQNDLVTTTIT 263
>SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein
Ndc80|Schizosaccharomyces pombe|chr 2|||Manual
Length = 624
Score = 28.3 bits (60), Expect = 1.2
Identities = 17/59 (28%), Positives = 34/59 (57%)
Frame = +1
Query: 553 LAERANLEEQIAEINGKAQAFEEELITVSRDRDNFQLKYVSAETTLKESEKQVKEIEQL 729
+ R NL +Q+ ++N + + + +L+ RD +Q++ + + ++ E EK V E EQL
Sbjct: 326 MESRTNLMKQL-QVNIEEKESQLQLLKEKRDSLKYQVE--NQDISISEFEKMVSEREQL 381
Score = 25.8 bits (54), Expect = 6.3
Identities = 16/85 (18%), Positives = 38/85 (44%)
Frame = +2
Query: 275 SLQRDLLFTTKECEILKEELSTTKTKLAGIEDNSFGMDDMVQSLKEEINEMKAQNDRLRH 454
++QRD + +K ++ + + ++ N + +Q LKE+ + +K Q +
Sbjct: 307 TMQRDEVKFQSAMSGMKSKMESRTNLMKQLQVNIEEKESQLQLLKEKRDSLKYQVENQDI 366
Query: 455 SLDDNEKLLRVSENTAEEFRTLSAK 529
S+ + EK++ E + +K
Sbjct: 367 SISEFEKMVSEREQLDRNLNMIGSK 391
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 28.3 bits (60), Expect = 1.2
Identities = 14/67 (20%), Positives = 34/67 (50%)
Frame = +1
Query: 529 VENTLSELLAERANLEEQIAEINGKAQAFEEELITVSRDRDNFQLKYVSAETTLKESEKQ 708
+ N L+ + + I++I+ + + L+++ R D F ++ S + + +Q
Sbjct: 154 LNNKLAVCDRNYSEAQHNISKISPELIGIQTRLVSIHRQIDGFAVRPTSDPGFIDRTMEQ 213
Query: 709 VKEIEQL 729
+KEIE++
Sbjct: 214 LKEIEEM 220
>SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 27.9 bits (59), Expect = 1.6
Identities = 23/86 (26%), Positives = 39/86 (45%)
Frame = +1
Query: 472 KTVASIRKYCRGVQNTLSEVENTLSELLAERANLEEQIAEINGKAQAFEEELITVSRDRD 651
K VA+I + +EV +E L+ER + E A+++ K ++F+EEL+ +
Sbjct: 34 KLVAAIERQAALDDKYATEVHR--NEALSER--IRELEAKLSAK-KSFDEELVKFHNLEE 88
Query: 652 NFQLKYVSAETTLKESEKQVKEIEQL 729
QL E + E+E L
Sbjct: 89 KLQLTETKCRNAESEKSRVENELEDL 114
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 27.1 bits (57), Expect = 2.7
Identities = 29/113 (25%), Positives = 48/113 (42%)
Frame = +2
Query: 269 INSLQRDLLFTTKECEILKEELSTTKTKLAGIEDNSFGMDDMVQSLKEEINEMKAQNDRL 448
I S +D+ ++ E L EEL+ K L +D+ ++ LK+ E +Q D +
Sbjct: 433 IQSSIKDMENVFRKNEYLMEELNELKNNLEVESSKVLRLDEEMKCLKD---EQLSQFDTV 489
Query: 449 RHSLDDNEKLLRVSENTAEEFRTLSAKWRILSVSFWLKELT*RSKLQKSMEKL 607
D+ + L + +NT + L +ELT KL S+E L
Sbjct: 490 FSLTDERDGLQKDLKNTKGNLDDEIGRSAFLKSQIRDQELT-IEKLHDSLETL 541
>SPAC1783.07c |pap1|caf3, caf3|transcription factor
Caf3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 552
Score = 26.2 bits (55), Expect = 4.8
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +2
Query: 365 EDNSFGMDDMVQSLKEEINEMKAQNDRLRHSLDDNEKLLRVSENTAEEF 511
ED+ ++ V +LKE + +ND+LR + E+ LR+ ++ + F
Sbjct: 98 EDHLKALETQVVTLKELHSSTTLENDQLRQKVRQLEEELRILKDGSFTF 146
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 26.2 bits (55), Expect = 4.8
Identities = 15/68 (22%), Positives = 33/68 (48%)
Frame = +1
Query: 520 LSEVENTLSELLAERANLEEQIAEINGKAQAFEEELITVSRDRDNFQLKYVSAETTLKES 699
+ ++E+T L + LEE + + K E L + + +RD K ++ ET ++
Sbjct: 404 VQKLESTNRALESTIKTLEEDVYTMKNKIIELEGILKSANVERDGLVEKLIAEETLRRKL 463
Query: 700 EKQVKEIE 723
++E++
Sbjct: 464 HNTIQELK 471
>SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subunit
Taf7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 393
Score = 26.2 bits (55), Expect = 4.8
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 490 RKYCRGVQN-TLSEVENTLSELLAERANLEEQIAEINGKAQAFEEELITVSRD 645
+++ + V N T+ VEN + LLA E E+ +AQ + I +S D
Sbjct: 193 KRFRKRVSNRTIEAVENEVDRLLAMDERAESTSNELIDQAQLARDSSIALSED 245
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 25.8 bits (54), Expect = 6.3
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2
Query: 371 NSFGMDDMVQSLKEEINEMKAQNDRLRHSLDDNEKLLR 484
NS ++ +++ LK E +ND++ S+D K +R
Sbjct: 2231 NSSTINSLIRKLKRRRTESHTRNDKIHESIDQFFKDIR 2268
>SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 743
Score = 25.8 bits (54), Expect = 6.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 147 SNTNKNRLLTFLLTTASSVLLFTLGYYYID 236
S T NRL + ++ S+L T YYY D
Sbjct: 544 SITGGNRLYIYAASSVFSILCITALYYYTD 573
>SPBC16C6.05 |||translation initiation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 190
Score = 25.8 bits (54), Expect = 6.3
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 505 GVQNTLSEVENTLSELLAERANLEEQIAEINGKAQAFEEE 624
G Q+ ++ENTL+ + +N EEQ A++ + + E E
Sbjct: 51 GEQDLSKDLENTLNVSGTKDSNAEEQPAKLTKEEKRVERE 90
>SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1877
Score = 25.8 bits (54), Expect = 6.3
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 275 SLQRDLLFTTKECEILKEELSTTKTKLA-GIEDNSFGMDDMVQSLKEEI 418
S+Q +L + E L + ++ +A G E NSF D+++SL EEI
Sbjct: 534 SIQNKMLVKNGD-EALTIAICDSRCLIARGTESNSFKRSDLLKSLLEEI 581
>SPCC338.07c |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 729
Score = 25.8 bits (54), Expect = 6.3
Identities = 16/65 (24%), Positives = 35/65 (53%)
Frame = +1
Query: 526 EVENTLSELLAERANLEEQIAEINGKAQAFEEELITVSRDRDNFQLKYVSAETTLKESEK 705
++ L + L++R E++ E + K++A E+ + V D D V+ LKE++K
Sbjct: 606 KIYKKLKKDLSKRLERAEKLKEAD-KSRAKSEDGMPVKYDEDPLGENLVATSEPLKEAQK 664
Query: 706 QVKEI 720
++++
Sbjct: 665 CLEKL 669
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 25.4 bits (53), Expect = 8.4
Identities = 20/90 (22%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +2
Query: 269 INSLQRDLLFTTKECEILKEELSTTKTKLAGIEDNSFGMD---DMVQSLKEEINEMKAQN 439
+ ++ L +E E L + +++L +E+ + + D K E ++ +
Sbjct: 29 LKEVELQLSLKEQEYESLSRKSEAAESQLEELEEETKQLRLKADNEDIQKTEAEQLSRKV 88
Query: 440 DRLRHSLDDNEKLLRVSENTAEEFRTLSAK 529
+ L L+ N+KLLR T E+ R K
Sbjct: 89 ELLEEELETNDKLLR---ETTEKMRQTDVK 115
>SPAP27G11.04c |||tRNA specific adenosine deaminase subunit Tad3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 315
Score = 25.4 bits (53), Expect = 8.4
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -2
Query: 294 NKSLCKELIVPISHHPVTLC 235
++ LCK+L V ++H P +C
Sbjct: 237 DRYLCKDLTVVMTHEPCVMC 256
>SPCC330.04c |mug135||DUF1773 family protein 3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 357
Score = 25.4 bits (53), Expect = 8.4
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 407 KEEINEMKAQNDRLRHSLDDNEKLLRVSENTAEEFRTLSAKWR 535
+EE E + D R S+D+ K + + +E+R + +WR
Sbjct: 180 REEDKEWRNSMDEWRKSMDEWRKSMDEWRKSMDEWRKSTDEWR 222
>SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 814
Score = 25.4 bits (53), Expect = 8.4
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 547 ELLAERANLEEQ-IAEINGKAQAFEEELITVSRDRDNFQLKYVSAETTLKESEKQVK 714
ELLA+ + + I + + E+E I DR+N +L ++ L ESE +V+
Sbjct: 651 ELLAKEEGITDSWIVKHHETLYELEKEKIKKKFDRENEKLAAEDPKSVLPESELEVR 707
>SPBC25B2.09c |||arginine-tRNA ligase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 618
Score = 25.4 bits (53), Expect = 8.4
Identities = 14/63 (22%), Positives = 35/63 (55%)
Frame = +2
Query: 383 MDDMVQSLKEEINEMKAQNDRLRHSLDDNEKLLRVSENTAEEFRTLSAKWRILSVSFWLK 562
+DD+++ KEE++++ +N+ +++ E++ + TA + + K RI + +F
Sbjct: 430 LDDIMEVAKEEMHKVMQKNEEKYAQVENPEEVADIVGKTAIRIQDSTGK-RINNYAFDWS 488
Query: 563 ELT 571
+T
Sbjct: 489 RMT 491
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,734,811
Number of Sequences: 5004
Number of extensions: 54784
Number of successful extensions: 252
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 250
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 343230174
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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