Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021046
(790 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL358938-6|CAI14276.1| 167|Homo sapiens novel protein protein. 98 3e-20
BC012032-1|AAH12032.1| 137|Homo sapiens golgi autoantigen, golg... 97 8e-20
AF068291-1|AAF65180.1| 147|Homo sapiens HDCKB03P protein. 97 8e-20
AB104615-1|BAC82368.1| 137|Homo sapiens Golgi complex-associate... 97 8e-20
BC110810-1|AAI10811.1| 167|Homo sapiens chromosome 10 open read... 96 1e-19
BC047761-1|AAH47761.1| 378|Homo sapiens MKL2 protein protein. 30 8.3
>AL358938-6|CAI14276.1| 167|Homo sapiens novel protein protein.
Length = 167
Score = 98.3 bits (234), Expect = 3e-20
Identities = 41/75 (54%), Positives = 56/75 (74%)
Frame = +3
Query: 285 QTFEHTIERLNEHFEMAETADCSTYCEGCLACLTAYFIYICTETHYEKHLRKVSKFIATQ 464
Q FE T++ LN + AE S+Y EGCLAC TAYFI++C ETHYEK L+K+S++I Q
Sbjct: 50 QLFEETVKTLNGFYAEAEKIGGSSYLEGCLACATAYFIFLCMETHYEKVLKKISRYIQEQ 109
Query: 465 NERVYNPRGVHITDP 509
NE+++ PRG+ +TDP
Sbjct: 110 NEKIFAPRGLLLTDP 124
Score = 34.7 bits (76), Expect = 0.38
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +1
Query: 196 KIFIQRDYXEGTAVKFQTRF 255
K+FIQRDY +GT +FQT+F
Sbjct: 20 KVFIQRDYSDGTICQFQTKF 39
>BC012032-1|AAH12032.1| 137|Homo sapiens golgi autoantigen, golgin
subfamily a, 7 protein.
Length = 137
Score = 96.7 bits (230), Expect = 8e-20
Identities = 42/75 (56%), Positives = 54/75 (72%)
Frame = +3
Query: 285 QTFEHTIERLNEHFEMAETADCSTYCEGCLACLTAYFIYICTETHYEKHLRKVSKFIATQ 464
Q FE T+ LN + AE +Y EGCLACLTAY I++C ETHYEK L+KVSK+I Q
Sbjct: 41 QQFEETVRTLNNLYAEAEKLGGQSYLEGCLACLTAYTIFLCMETHYEKVLKKVSKYIQEQ 100
Query: 465 NERVYNPRGVHITDP 509
NE++Y P+G+ +TDP
Sbjct: 101 NEKIYAPQGLLLTDP 115
Score = 34.7 bits (76), Expect = 0.38
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +1
Query: 196 KIFIQRDYXEGTAVKFQTRFRLSLK 270
K+FIQRDY GT +FQT+F L+
Sbjct: 11 KVFIQRDYSSGTRCQFQTKFPAELE 35
>AF068291-1|AAF65180.1| 147|Homo sapiens HDCKB03P protein.
Length = 147
Score = 96.7 bits (230), Expect = 8e-20
Identities = 42/75 (56%), Positives = 54/75 (72%)
Frame = +3
Query: 285 QTFEHTIERLNEHFEMAETADCSTYCEGCLACLTAYFIYICTETHYEKHLRKVSKFIATQ 464
Q FE T+ LN + AE +Y EGCLACLTAY I++C ETHYEK L+KVSK+I Q
Sbjct: 51 QQFEETVRTLNNLYAEAEKLGGQSYLEGCLACLTAYTIFLCMETHYEKVLKKVSKYIQEQ 110
Query: 465 NERVYNPRGVHITDP 509
NE++Y P+G+ +TDP
Sbjct: 111 NEKIYAPQGLLLTDP 125
Score = 34.7 bits (76), Expect = 0.38
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +1
Query: 196 KIFIQRDYXEGTAVKFQTRFRLSLK 270
K+FIQRDY GT +FQT+F L+
Sbjct: 21 KVFIQRDYSSGTRYQFQTKFPAELE 45
>AB104615-1|BAC82368.1| 137|Homo sapiens Golgi complex-associated
protein of 16kDa protein.
Length = 137
Score = 96.7 bits (230), Expect = 8e-20
Identities = 42/75 (56%), Positives = 54/75 (72%)
Frame = +3
Query: 285 QTFEHTIERLNEHFEMAETADCSTYCEGCLACLTAYFIYICTETHYEKHLRKVSKFIATQ 464
Q FE T+ LN + AE +Y EGCLACLTAY I++C ETHYEK L+KVSK+I Q
Sbjct: 41 QQFEETVRTLNNLYAEAEKLGGQSYLEGCLACLTAYTIFLCMETHYEKVLKKVSKYIQEQ 100
Query: 465 NERVYNPRGVHITDP 509
NE++Y P+G+ +TDP
Sbjct: 101 NEKIYAPQGLLLTDP 115
Score = 34.7 bits (76), Expect = 0.38
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +1
Query: 196 KIFIQRDYXEGTAVKFQTRFRLSLK 270
K+FIQRDY GT +FQT+F L+
Sbjct: 11 KVFIQRDYSSGTRCQFQTKFPAELE 35
>BC110810-1|AAI10811.1| 167|Homo sapiens chromosome 10 open reading
frame 132 protein.
Length = 167
Score = 95.9 bits (228), Expect = 1e-19
Identities = 40/75 (53%), Positives = 55/75 (73%)
Frame = +3
Query: 285 QTFEHTIERLNEHFEMAETADCSTYCEGCLACLTAYFIYICTETHYEKHLRKVSKFIATQ 464
Q FE T++ LN + AE S+Y EGCLAC AYFI++C ETHYEK L+K+S++I Q
Sbjct: 50 QLFEETVKTLNGFYAEAEKIGGSSYLEGCLACAMAYFIFLCMETHYEKVLKKISRYIQEQ 109
Query: 465 NERVYNPRGVHITDP 509
NE+++ PRG+ +TDP
Sbjct: 110 NEKIFAPRGLLLTDP 124
Score = 34.7 bits (76), Expect = 0.38
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +1
Query: 196 KIFIQRDYXEGTAVKFQTRF 255
K+FIQRDY +GT +FQT+F
Sbjct: 20 KVFIQRDYSDGTICQFQTKF 39
>BC047761-1|AAH47761.1| 378|Homo sapiens MKL2 protein protein.
Length = 378
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = -2
Query: 363 HNMYCSLLSLPFQSAHSVSLLYVQRFVCLSFLQAQAESSLEF 238
H Y ++L PF++ H+VS +++ R C+ F ++ EF
Sbjct: 297 HYNYQTILPAPFKAYHTVSEVHMVRVACIPFQFLSSKIGSEF 338
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,958,314
Number of Sequences: 237096
Number of extensions: 2312823
Number of successful extensions: 4254
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4254
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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