Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021045
(794 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 143 4e-33
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 139 6e-32
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 136 6e-31
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 136 8e-31
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 132 7e-30
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 128 1e-28
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 128 2e-28
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 126 5e-28
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 124 3e-27
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 123 6e-27
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 123 6e-27
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 120 4e-26
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 120 4e-26
UniRef50_Q4P3W3 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 117 4e-25
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 116 7e-25
UniRef50_Q5KMS9 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 113 5e-24
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 110 3e-23
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 97 4e-19
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 94 3e-18
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 93 6e-18
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 92 2e-17
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 91 3e-17
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 89 9e-17
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 85 1e-15
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 83 6e-15
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 83 1e-14
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 82 2e-14
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 81 2e-14
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 81 2e-14
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 81 4e-14
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 81 4e-14
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 79 1e-13
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 79 1e-13
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 79 1e-13
UniRef50_A7AWJ7 Cluster: DEAD/DEAH box helicase and helicase con... 79 1e-13
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 79 2e-13
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 79 2e-13
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 78 2e-13
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 78 2e-13
UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX... 78 2e-13
UniRef50_Q0HLM7 Cluster: DEAD/DEAH box helicase domain protein; ... 78 3e-13
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 78 3e-13
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 78 3e-13
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 77 4e-13
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 77 4e-13
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 77 5e-13
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 77 5e-13
UniRef50_Q4SDX4 Cluster: Chromosome undetermined SCAF14628, whol... 76 9e-13
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 76 9e-13
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 76 9e-13
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 76 9e-13
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U... 76 9e-13
UniRef50_Q4N0E9 Cluster: ATP-dependent RNA helicase, putative; n... 76 1e-12
UniRef50_Q9FLB0 Cluster: DEAD-box ATP-dependent RNA helicase 18;... 76 1e-12
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 75 2e-12
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 75 2e-12
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 75 2e-12
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 75 2e-12
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 75 2e-12
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 75 2e-12
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 75 2e-12
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 75 3e-12
UniRef50_Q4P9E5 Cluster: ATP-dependent rRNA helicase SPB4; n=2; ... 75 3e-12
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 75 3e-12
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 74 4e-12
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 74 4e-12
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 74 5e-12
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 74 5e-12
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 74 5e-12
UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2; ... 74 5e-12
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 73 6e-12
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 73 6e-12
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 73 6e-12
UniRef50_Q38DS7 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 73 6e-12
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 73 6e-12
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 73 6e-12
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 73 6e-12
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 73 8e-12
UniRef50_Q013Q9 Cluster: DEAD/DEAH box helicase, putative; n=7; ... 73 8e-12
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 73 8e-12
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 73 8e-12
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 73 1e-11
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 73 1e-11
UniRef50_Q9FVV4 Cluster: Putative DEAD-box ATP-dependent RNA hel... 73 1e-11
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 73 1e-11
UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;... 72 1e-11
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 72 1e-11
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 72 1e-11
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 72 1e-11
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 72 1e-11
UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101, w... 72 1e-11
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 72 1e-11
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 72 2e-11
UniRef50_UPI0000499530 Cluster: DEAD/DEAH box helicase; n=2; Ent... 72 2e-11
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 72 2e-11
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 72 2e-11
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 72 2e-11
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 72 2e-11
UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3; Ent... 71 3e-11
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 71 3e-11
UniRef50_Q2BIX8 Cluster: Probable ATP-dependent RNA helicase; n=... 71 3e-11
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 71 3e-11
UniRef50_Q54DV7 Cluster: Putative uncharacterized protein; n=1; ... 71 3e-11
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 71 3e-11
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 71 3e-11
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 71 3e-11
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 71 3e-11
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 71 3e-11
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 71 3e-11
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 71 3e-11
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 71 3e-11
UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella ve... 71 3e-11
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 71 3e-11
UniRef50_Q5KN79 Cluster: ATP-dependent RNA helicase DBP4; n=1; F... 71 3e-11
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 71 4e-11
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 71 4e-11
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 71 4e-11
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 71 4e-11
UniRef50_A7P0R7 Cluster: Chromosome chr19 scaffold_4, whole geno... 71 4e-11
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 71 4e-11
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 71 4e-11
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 71 4e-11
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 70 6e-11
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 70 6e-11
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 70 6e-11
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 70 6e-11
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 70 6e-11
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 70 6e-11
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 70 6e-11
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 70 6e-11
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 70 6e-11
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 70 8e-11
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 70 8e-11
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 70 8e-11
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 70 8e-11
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 70 8e-11
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 70 8e-11
UniRef50_Q015I7 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 70 8e-11
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 70 8e-11
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 70 8e-11
UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX... 70 8e-11
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 69 1e-10
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 69 1e-10
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 69 1e-10
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 69 1e-10
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 69 1e-10
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 69 1e-10
UniRef50_A1WB42 Cluster: DEAD/DEAH box helicase domain protein; ... 69 1e-10
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 69 1e-10
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 69 1e-10
UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, wh... 69 1e-10
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 69 1e-10
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 69 1e-10
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 69 1e-10
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 69 1e-10
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 69 1e-10
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 69 1e-10
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 69 1e-10
UniRef50_Q012T2 Cluster: DEAD-box protein abstrakt; n=3; Ostreoc... 69 1e-10
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ... 69 1e-10
UniRef50_Q5CWJ4 Cluster: Drs1p, eIF4a-1-family RNA SFII helicase... 69 1e-10
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 69 2e-10
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 69 2e-10
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 69 2e-10
UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;... 69 2e-10
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 69 2e-10
UniRef50_A6R918 Cluster: Putative uncharacterized protein; n=1; ... 69 2e-10
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 69 2e-10
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 68 2e-10
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 68 2e-10
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 68 2e-10
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 68 2e-10
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 68 2e-10
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 68 2e-10
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 68 2e-10
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 68 2e-10
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 68 2e-10
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 68 2e-10
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 68 2e-10
UniRef50_UPI0001509DC1 Cluster: DEAD/DEAH box helicase family pr... 68 3e-10
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 68 3e-10
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 68 3e-10
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 68 3e-10
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 68 3e-10
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 68 3e-10
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 68 3e-10
UniRef50_Q8SR01 Cluster: ATP-dependent RNA helicase DBP4; n=1; E... 68 3e-10
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 67 4e-10
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 67 4e-10
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 67 4e-10
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 67 4e-10
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 67 4e-10
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 67 4e-10
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 67 4e-10
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 67 4e-10
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 67 4e-10
UniRef50_Q4U8S0 Cluster: DEAD-box family helicase, putative; n=2... 67 4e-10
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 67 4e-10
UniRef50_Q4Q8D5 Cluster: ATP-dependent RNA helicase, putative; n... 67 4e-10
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 67 4e-10
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 67 4e-10
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 67 4e-10
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 67 4e-10
UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 67 5e-10
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 67 5e-10
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 67 5e-10
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 67 5e-10
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 67 5e-10
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 67 5e-10
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 67 5e-10
UniRef50_Q9UTP9 Cluster: ATP-dependent RNA helicase dbp4; n=1; S... 67 5e-10
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 66 7e-10
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 66 7e-10
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 66 7e-10
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 66 7e-10
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 66 7e-10
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 66 7e-10
UniRef50_Q7R0K7 Cluster: GLP_154_39979_41331; n=1; Giardia lambl... 66 7e-10
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 66 7e-10
UniRef50_Q23WN3 Cluster: Helicase conserved C-terminal domain co... 66 7e-10
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 66 7e-10
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 66 7e-10
UniRef50_Q6C193 Cluster: ATP-dependent rRNA helicase SPB4; n=1; ... 66 7e-10
UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family pr... 66 1e-09
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 66 1e-09
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 66 1e-09
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 66 1e-09
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 66 1e-09
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 66 1e-09
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 66 1e-09
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 66 1e-09
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 66 1e-09
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 66 1e-09
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 66 1e-09
UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein; ... 66 1e-09
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 66 1e-09
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 66 1e-09
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 66 1e-09
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 66 1e-09
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 66 1e-09
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 66 1e-09
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 66 1e-09
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 66 1e-09
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 66 1e-09
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 66 1e-09
UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3; ... 66 1e-09
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 66 1e-09
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 66 1e-09
UniRef50_A7AWS5 Cluster: DEAD/DEAH box helicase and helicase con... 66 1e-09
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 66 1e-09
UniRef50_Q9FFT9 Cluster: Probable DEAD-box ATP-dependent RNA hel... 66 1e-09
UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 66 1e-09
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 66 1e-09
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 66 1e-09
UniRef50_UPI0000E49D13 Cluster: PREDICTED: similar to DEAD (Asp-... 65 2e-09
UniRef50_UPI00006CA44F Cluster: DEAD/DEAH box helicase family pr... 65 2e-09
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 65 2e-09
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 65 2e-09
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 65 2e-09
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 65 2e-09
UniRef50_Q00VZ7 Cluster: DEAD/DEAH box helicase, putative; n=2; ... 65 2e-09
UniRef50_A7PDS5 Cluster: Chromosome chr11 scaffold_13, whole gen... 65 2e-09
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 65 2e-09
UniRef50_A0DK92 Cluster: Chromosome undetermined scaffold_54, wh... 65 2e-09
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 65 2e-09
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 65 2e-09
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 65 2e-09
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 65 2e-09
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 65 2e-09
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 65 2e-09
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 65 2e-09
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 65 2e-09
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=... 65 2e-09
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 65 2e-09
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 65 2e-09
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 65 2e-09
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 65 2e-09
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 65 2e-09
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 65 2e-09
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 65 2e-09
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 65 2e-09
UniRef50_Q6K7R9 Cluster: DEAD-box ATP-dependent RNA helicase 48;... 65 2e-09
UniRef50_Q0D622 Cluster: DEAD-box ATP-dependent RNA helicase 32;... 65 2e-09
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 65 2e-09
UniRef50_UPI00015B5BD1 Cluster: PREDICTED: similar to RE48840p; ... 64 3e-09
UniRef50_UPI00015B5BA9 Cluster: PREDICTED: similar to RE48840p; ... 64 3e-09
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 64 3e-09
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 64 3e-09
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 64 3e-09
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 64 3e-09
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 64 3e-09
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 64 3e-09
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 64 3e-09
UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-... 64 3e-09
UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gamb... 64 3e-09
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 64 3e-09
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 64 3e-09
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 64 3e-09
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 64 3e-09
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 64 3e-09
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 64 4e-09
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 64 4e-09
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 64 4e-09
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 64 4e-09
UniRef50_A2E5C2 Cluster: DEAD/DEAH box helicase family protein; ... 64 4e-09
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 64 4e-09
UniRef50_Q0CMM5 Cluster: Putative uncharacterized protein; n=2; ... 64 4e-09
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 64 4e-09
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 64 4e-09
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX... 64 4e-09
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 64 5e-09
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 64 5e-09
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 64 5e-09
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 64 5e-09
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 64 5e-09
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 64 5e-09
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 64 5e-09
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 64 5e-09
UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, wh... 64 5e-09
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 64 5e-09
UniRef50_Q5KAW6 Cluster: RNA helicase, putative; n=2; Filobasidi... 64 5e-09
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 63 7e-09
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 63 7e-09
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 63 7e-09
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 63 7e-09
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 63 7e-09
UniRef50_Q011U7 Cluster: Myc-regulated DEAD/H box 18 RNA helicas... 63 7e-09
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 63 7e-09
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 63 7e-09
UniRef50_Q6CDS6 Cluster: ATP-dependent RNA helicase ROK1; n=1; Y... 63 7e-09
UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 63 7e-09
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 63 7e-09
UniRef50_UPI0000498886 Cluster: DEAD/DEAH box helicase; n=1; Ent... 63 9e-09
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 63 9e-09
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 63 9e-09
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 63 9e-09
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 63 9e-09
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 63 9e-09
UniRef50_A7QKJ8 Cluster: Chromosome chr2 scaffold_112, whole gen... 63 9e-09
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 63 9e-09
UniRef50_Q7R3I2 Cluster: GLP_158_41121_38797; n=1; Giardia lambl... 63 9e-09
UniRef50_Q7PDQ7 Cluster: Similar ATP-dependent RNA Helicase; n=2... 63 9e-09
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 63 9e-09
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 63 9e-09
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 63 9e-09
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 63 9e-09
UniRef50_Q6FM43 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 63 9e-09
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 63 9e-09
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 63 9e-09
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 63 9e-09
UniRef50_Q5FLW7 Cluster: RNA helicase; n=9; Lactobacillus|Rep: R... 62 1e-08
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 62 1e-08
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 62 1e-08
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 62 1e-08
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 62 1e-08
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 62 1e-08
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 62 1e-08
UniRef50_A2YDR2 Cluster: Putative uncharacterized protein; n=2; ... 62 1e-08
UniRef50_A2YDM1 Cluster: Putative uncharacterized protein; n=2; ... 62 1e-08
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 62 1e-08
UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium... 62 1e-08
UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1; ... 62 1e-08
UniRef50_Q4Q552 Cluster: ATP-dependent RNA helicase, putative; n... 62 1e-08
UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicas... 62 1e-08
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 62 1e-08
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 62 2e-08
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 62 2e-08
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 62 2e-08
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 62 2e-08
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 62 2e-08
UniRef50_Q4Q1P0 Cluster: DEAD box RNA helicase, putative; n=5; T... 62 2e-08
UniRef50_Q4N559 Cluster: ATP-dependent RNA helicase, putative; n... 62 2e-08
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 62 2e-08
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 62 2e-08
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 62 2e-08
UniRef50_UPI0000D57716 Cluster: PREDICTED: similar to CG9143-PA;... 62 2e-08
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 62 2e-08
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 62 2e-08
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 62 2e-08
UniRef50_Q03GJ4 Cluster: Superfamily II DNA and RNA helicase; n=... 62 2e-08
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 62 2e-08
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 62 2e-08
UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVL... 62 2e-08
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 62 2e-08
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 62 2e-08
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 62 2e-08
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 61 3e-08
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 61 3e-08
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 61 3e-08
UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,... 61 3e-08
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 61 3e-08
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 61 3e-08
UniRef50_Q9AW79 Cluster: Putative RNA-dependent helicase; n=1; G... 61 3e-08
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 61 3e-08
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 61 3e-08
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 61 3e-08
UniRef50_A7U5X2 Cluster: DEAD-box helicase 15; n=2; Plasmodium f... 61 3e-08
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 61 3e-08
UniRef50_Q966L9 Cluster: ATP-dependent RNA helicase glh-2; n=4; ... 61 3e-08
UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1; U... 61 3e-08
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 61 4e-08
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 61 4e-08
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 61 4e-08
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 61 4e-08
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 61 4e-08
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 61 4e-08
UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68; ... 61 4e-08
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 61 4e-08
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 61 4e-08
UniRef50_A5K917 Cluster: DEAD/DEAH box helicase, putative; n=4; ... 61 4e-08
UniRef50_A2FYU9 Cluster: DEAD/DEAH box helicase family protein; ... 61 4e-08
UniRef50_A2E0F8 Cluster: DEAD/DEAH box helicase family protein; ... 61 4e-08
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 61 4e-08
UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;... 61 4e-08
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 61 4e-08
UniRef50_UPI0000498E70 Cluster: DEAD/DEAH box helicase; n=1; Ent... 60 5e-08
UniRef50_Q4KME7 Cluster: Zgc:111908 protein; n=3; Danio rerio|Re... 60 5e-08
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 60 5e-08
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 60 5e-08
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 60 5e-08
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 60 5e-08
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 60 5e-08
UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=... 60 5e-08
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 60 5e-08
UniRef50_Q4YV55 Cluster: RNA helicase , putative; n=4; Plasmodiu... 60 5e-08
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 60 5e-08
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n... 60 5e-08
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 60 5e-08
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 60 5e-08
UniRef50_Q96XQ7 Cluster: 337aa long hypothetical ATP-dependent R... 60 5e-08
UniRef50_Q8SR49 Cluster: ATP-dependent rRNA helicase SPB4; n=1; ... 60 5e-08
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 60 5e-08
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 60 5e-08
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 60 5e-08
UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1; U... 60 5e-08
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 60 6e-08
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 60 6e-08
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 60 6e-08
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 60 6e-08
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 60 6e-08
UniRef50_Q5CWD0 Cluster: Prp5p C terminal KH. eIF4A-1-family RNA... 60 6e-08
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 60 6e-08
UniRef50_A4RHM4 Cluster: Putative uncharacterized protein; n=1; ... 60 6e-08
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 60 8e-08
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 60 8e-08
UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;... 60 8e-08
UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2; Bacill... 60 8e-08
UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=... 60 8e-08
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 60 8e-08
UniRef50_A2SJY2 Cluster: Putative ATP-dependent RNA helicase; n=... 60 8e-08
UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2; ... 60 8e-08
UniRef50_Q5CUT2 Cluster: Spb4p, eIF4a-1-family RNA SFII helicase... 60 8e-08
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 60 8e-08
UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, wh... 60 8e-08
UniRef50_A0CUN8 Cluster: Chromosome undetermined scaffold_28, wh... 60 8e-08
UniRef50_Q8NJW1 Cluster: CYT-19 DEAD-box protein precursor; n=1;... 60 8e-08
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 60 8e-08
UniRef50_O74764 Cluster: ATP-dependent rRNA helicase spb4; n=1; ... 60 8e-08
UniRef50_A5E2I8 Cluster: ATP-dependent rRNA helicase SPB4; n=3; ... 60 8e-08
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 60 8e-08
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 60 8e-08
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 60 8e-08
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 59 1e-07
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 59 1e-07
UniRef50_Q4AEL1 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 59 1e-07
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 59 1e-07
UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genom... 59 1e-07
UniRef50_Q4P0P9 Cluster: Putative uncharacterized protein; n=1; ... 59 1e-07
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 59 1e-07
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 59 1e-07
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 59 1e-07
UniRef50_UPI0000ECBDA5 Cluster: ATP-dependent RNA helicase DDX24... 59 1e-07
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 59 1e-07
UniRef50_Q2J919 Cluster: Helicase-like; n=3; Frankia|Rep: Helica... 59 1e-07
UniRef50_Q1U8H0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 59 1e-07
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 59 1e-07
UniRef50_Q8IL21 Cluster: RNA helicase, putative; n=2; Plasmodium... 59 1e-07
UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n... 59 1e-07
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 59 1e-07
UniRef50_Q1E1R7 Cluster: ATP-dependent rRNA helicase SPB4; n=3; ... 59 1e-07
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 59 1e-07
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 59 1e-07
UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2; F... 59 1e-07
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 58 2e-07
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 58 2e-07
UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5; Actino... 58 2e-07
UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein p... 58 2e-07
UniRef50_Q54EC2 Cluster: Putative uncharacterized protein; n=1; ... 58 2e-07
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 58 2e-07
UniRef50_A5K5I2 Cluster: Putative uncharacterized protein; n=1; ... 58 2e-07
UniRef50_Q873H9 Cluster: ATP-dependent rRNA helicase spb-4; n=14... 58 2e-07
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 58 2e-07
UniRef50_Q9C8S9 Cluster: Probable DEAD-box ATP-dependent RNA hel... 58 2e-07
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 58 2e-07
UniRef50_Q9VHU1 Cluster: Probable ATP-dependent RNA helicase DDX... 58 2e-07
UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;... 58 2e-07
UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;... 58 2e-07
UniRef50_UPI0000E49031 Cluster: PREDICTED: similar to DEAD/DEXH ... 58 3e-07
UniRef50_Q88XN5 Cluster: ATP-dependent RNA helicase; n=2; Lactob... 58 3e-07
UniRef50_Q6F1J3 Cluster: ATP-dependent RNA helicase; n=4; Mollic... 58 3e-07
>UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 143 bits (347), Expect = 4e-33
Identities = 66/94 (70%), Positives = 82/94 (87%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+++VATPGRFLH+C+EM LKL++I+ VVFDEADRLFE+GFGEQL E RLPSSRQT++F
Sbjct: 161 DVIVATPGRFLHLCVEMDLKLNSIEYVVFDEADRLFEMGFGEQLNETLHRLPSSRQTVMF 220
Query: 688 SATLPKMLVEFARAGLSDPTLDKIRVDWKLPSTL 789
SATLPK+LVEFARAGL+DP L ++ V+ KLP L
Sbjct: 221 SATLPKLLVEFARAGLNDPVLIRLDVESKLPDAL 254
Score = 93.9 bits (223), Expect = 4e-18
Identities = 44/80 (55%), Positives = 61/80 (76%)
Frame = +2
Query: 254 SMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT 433
+MA+TGSGKTACF++P+ EKL + P K RALILSPTRELA+QT +F++ELG+F
Sbjct: 81 AMAKTGSGKTACFLIPLFEKL----QRREPTKGARALILSPTRELAVQTYKFIKELGRFM 136
Query: 434 GLTSAAILGGESIEQQFNVM 493
L S +LGG+S++ QF+ +
Sbjct: 137 ELKSILVLGGDSMDSQFSAI 156
Score = 77.0 bits (181), Expect = 5e-13
Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Frame = +3
Query: 33 KELDDHLPGFDAPKADXXXXXXXXXXXXXXS----SGAFQSMGLSFPVLKGITKRGYKQP 200
K+ D +PGF + D S SG FQSMGL F ++KGITKRGYK P
Sbjct: 3 KKQADEIPGFPSLDNDAGTSDRGADILKSKSKKNKSGGFQSMGLGFELIKGITKRGYKVP 62
Query: 201 TPIQRKTIPIALTGKDVVQWPELGPEK 281
TPIQRKTIP+ L G+DVV + G K
Sbjct: 63 TPIQRKTIPLILEGRDVVAMAKTGSGK 89
>UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG32344-PA - Apis mellifera
Length = 743
Score = 139 bits (337), Expect = 6e-32
Identities = 65/94 (69%), Positives = 81/94 (86%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+I++ATPGRFLHICIEM L+L+NI+ VVFDEADRLFE+GFGEQ+ EI RLP SRQTLLF
Sbjct: 158 DILIATPGRFLHICIEMDLQLNNIEYVVFDEADRLFEMGFGEQINEIINRLPESRQTLLF 217
Query: 688 SATLPKMLVEFARAGLSDPTLDKIRVDWKLPSTL 789
SATLPK+LV+FA+ GL+DP L ++ V+ K+P L
Sbjct: 218 SATLPKLLVDFAKIGLNDPVLLRLDVENKIPEQL 251
Score = 102 bits (244), Expect = 1e-20
Identities = 49/83 (59%), Positives = 65/83 (78%)
Frame = +2
Query: 254 SMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT 433
+MARTGSGKTACF++P+ EKL + K RALILSPTRELALQTL+F++ELG+FT
Sbjct: 78 AMARTGSGKTACFLIPLFEKLKIRQAKV----GARALILSPTRELALQTLKFIKELGRFT 133
Query: 434 GLTSAAILGGESIEQQFNVMSGS 502
GL + ILGG+++E QF+ + G+
Sbjct: 134 GLKATIILGGDNMENQFSAIHGN 156
Score = 78.6 bits (185), Expect = 2e-13
Identities = 36/52 (69%), Positives = 40/52 (76%)
Frame = +3
Query: 126 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
SG FQSM LSFP+LKGI KRGYK PTPIQRKTIP+AL G+D+V G K
Sbjct: 35 SGGFQSMALSFPILKGILKRGYKIPTPIQRKTIPLALEGRDIVAMARTGSGK 86
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 136 bits (329), Expect = 6e-31
Identities = 64/94 (68%), Positives = 78/94 (82%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+I+VATPGRFLHICIEM + L +I+ V+FDEADRLFE+GFGEQ+ EI RLP +RQTLLF
Sbjct: 160 DIIVATPGRFLHICIEMDMNLKSIEFVIFDEADRLFEMGFGEQIHEIANRLPKNRQTLLF 219
Query: 688 SATLPKMLVEFARAGLSDPTLDKIRVDWKLPSTL 789
SATLPK+LVEFA AGL +P L ++ V+ KLP L
Sbjct: 220 SATLPKVLVEFATAGLRNPVLVRLDVESKLPDEL 253
Score = 102 bits (244), Expect = 1e-20
Identities = 50/91 (54%), Positives = 67/91 (73%)
Frame = +2
Query: 230 SIDRERCCSMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRF 409
++D +MARTGSGKTACF++P+ EKL K RALILSPTRELALQT RF
Sbjct: 72 ALDGRDVVAMARTGSGKTACFLIPMFEKLKTRQAKT----GARALILSPTRELALQTQRF 127
Query: 410 VRELGKFTGLTSAAILGGESIEQQFNVMSGS 502
++E+G+FTGL S+ ILGG+S++ QF+ + G+
Sbjct: 128 IKEIGRFTGLKSSVILGGDSMDNQFSAIHGN 158
Score = 73.7 bits (173), Expect = 5e-12
Identities = 36/52 (69%), Positives = 39/52 (75%)
Frame = +3
Query: 126 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
SG FQSMGLS V++GI KRGYK PTPIQRKTIPIAL G+DVV G K
Sbjct: 37 SGGFQSMGLSQSVIRGILKRGYKIPTPIQRKTIPIALDGRDVVAMARTGSGK 88
>UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 784
Score = 136 bits (328), Expect = 8e-31
Identities = 61/94 (64%), Positives = 79/94 (84%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+I+VATPGRFLH+C+EM LKL +++ VFDEADRLFE+GFGEQL E RLP +RQ +LF
Sbjct: 160 DIIVATPGRFLHLCVEMDLKLSSVQYCVFDEADRLFEMGFGEQLTETLRRLPEARQMVLF 219
Query: 688 SATLPKMLVEFARAGLSDPTLDKIRVDWKLPSTL 789
SATLPK++V+FA+AGLSDPTL ++ V+ K+P L
Sbjct: 220 SATLPKLMVDFAKAGLSDPTLIRLDVESKIPEAL 253
Score = 87.0 bits (206), Expect = 5e-16
Identities = 40/77 (51%), Positives = 57/77 (74%)
Frame = +2
Query: 254 SMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT 433
+MA+TGSGKT CF++P+ EKL K RAL+L+PTRELA+QT +F+++LGKFT
Sbjct: 80 AMAKTGSGKTGCFLIPLFEKLKQREIK----SGARALVLTPTRELAIQTFKFIKQLGKFT 135
Query: 434 GLTSAAILGGESIEQQF 484
L + +LGG+S++ QF
Sbjct: 136 DLKTILVLGGDSMDSQF 152
Score = 70.9 bits (166), Expect = 3e-11
Identities = 38/80 (47%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = +3
Query: 51 LPGFDAPKADXXXXXXXXXXXXXXSS---GAFQSMGLSFPVLKGITKRGYKQPTPIQRKT 221
LPGF AD G FQ+MGLS P+LK I K GYK PTPIQRKT
Sbjct: 9 LPGFSIENADLDFDDDDDVSGKKGKKKKGGGFQAMGLSMPILKAILKMGYKVPTPIQRKT 68
Query: 222 IPIALTGKDVVQWPELGPEK 281
IP+ L G+DVV + G K
Sbjct: 69 IPLILEGRDVVAMAKTGSGK 88
>UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;
Eukaryota|Rep: ATP-dependent RNA helicase DDX54 - Homo
sapiens (Human)
Length = 881
Score = 132 bits (320), Expect = 7e-30
Identities = 61/94 (64%), Positives = 77/94 (81%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+I++ATPGR +H+ +EM LKL +++ VVFDEADRLFE+GF EQLQEI ARLP QT+LF
Sbjct: 218 DIIIATPGRLVHVAVEMSLKLQSVEYVVFDEADRLFEMGFAEQLQEIIARLPGGHQTVLF 277
Query: 688 SATLPKMLVEFARAGLSDPTLDKIRVDWKLPSTL 789
SATLPK+LVEFARAGL++P L ++ VD KL L
Sbjct: 278 SATLPKLLVEFARAGLTEPVLIRLDVDTKLNEQL 311
Score = 98.3 bits (234), Expect = 2e-19
Identities = 50/84 (59%), Positives = 63/84 (75%)
Frame = +2
Query: 233 IDRERCCSMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFV 412
+D + +MARTGSGKTACF+LP+ E+L + + RALILSPTRELALQTL+F
Sbjct: 131 LDGKDVVAMARTGSGKTACFLLPMFERLKTHSAQT----GARALILSPTRELALQTLKFT 186
Query: 413 RELGKFTGLTSAAILGGESIEQQF 484
+ELGKFTGL +A ILGG+ +E QF
Sbjct: 187 KELGKFTGLKTALILGGDRMEDQF 210
Score = 77.8 bits (183), Expect = 3e-13
Identities = 36/52 (69%), Positives = 39/52 (75%)
Frame = +3
Query: 126 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
SG FQSMGLS+PV KGI K+GYK PTPIQRKTIP+ L GKDVV G K
Sbjct: 95 SGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGK 146
>UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP10
- Yarrowia lipolytica (Candida lipolytica)
Length = 926
Score = 128 bits (310), Expect = 1e-28
Identities = 60/94 (63%), Positives = 76/94 (80%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+I++ATPGRFLH+ +EM L L +++ + FDEADRLFELGFGEQ+ E+ A LPS+RQTLLF
Sbjct: 224 DIIIATPGRFLHLKVEMELSLASVEYICFDEADRLFELGFGEQMNELLASLPSNRQTLLF 283
Query: 688 SATLPKMLVEFARAGLSDPTLDKIRVDWKLPSTL 789
SATLPK LVEFA+AGL DP L ++ + KLP L
Sbjct: 284 SATLPKTLVEFAKAGLHDPILVRLDAETKLPEHL 317
Score = 84.2 bits (199), Expect = 3e-15
Identities = 45/79 (56%), Positives = 58/79 (73%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG 436
MARTGSGKTA FVLP+LEKL V + K RA+ILSP+RELALQTL+ V++ T
Sbjct: 145 MARTGSGKTAAFVLPMLEKLKVHSAKV----GARAVILSPSRELALQTLKVVKDFSAGTD 200
Query: 437 LTSAAILGGESIEQQFNVM 493
L A ++GG+S+E+QF +M
Sbjct: 201 LRLAMLVGGDSLEEQFKMM 219
Score = 67.3 bits (157), Expect = 4e-10
Identities = 32/53 (60%), Positives = 38/53 (71%)
Frame = +3
Query: 123 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
SSG+F +GLS VLK I ++G+KQPTPIQRKTIP+ L GKDVV G K
Sbjct: 100 SSGSFAGLGLSQLVLKNIARKGFKQPTPIQRKTIPLVLEGKDVVGMARTGSGK 152
>UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 4 SCAF14575, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 532
Score = 128 bits (308), Expect = 2e-28
Identities = 59/90 (65%), Positives = 74/90 (82%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+I++ TPGR +H+ EM LKL N++ VVFDEADRLFE+GF EQLQEI R P +RQTLLF
Sbjct: 159 DIIIGTPGRLMHVIKEMNLKLQNVEYVVFDEADRLFEMGFAEQLQEIIRRFPETRQTLLF 218
Query: 688 SATLPKMLVEFARAGLSDPTLDKIRVDWKL 777
SATLPK++VEFARAGL++P L ++ VD KL
Sbjct: 219 SATLPKVIVEFARAGLTEPVLIRLDVDSKL 248
Score = 93.9 bits (223), Expect = 4e-18
Identities = 47/84 (55%), Positives = 62/84 (73%)
Frame = +2
Query: 233 IDRERCCSMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFV 412
+D + +MARTGSGKTA F++P+ E+L P + RALILSPTRELALQT++F
Sbjct: 72 LDGKDVVAMARTGSGKTAAFLIPMFERLKAPQAQT----GARALILSPTRELALQTMKFT 127
Query: 413 RELGKFTGLTSAAILGGESIEQQF 484
+ELGKFT L +A ILGG+S++ QF
Sbjct: 128 KELGKFTKLKTALILGGDSMDDQF 151
Score = 77.4 bits (182), Expect = 4e-13
Identities = 35/52 (67%), Positives = 39/52 (75%)
Frame = +3
Query: 126 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
SG FQSMGLSFPV KG+ ++GYK PTPIQRKTIP+ L GKDVV G K
Sbjct: 36 SGGFQSMGLSFPVFKGVMRKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGK 87
>UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp10 -
Emericella nidulans (Aspergillus nidulans)
Length = 936
Score = 126 bits (305), Expect = 5e-28
Identities = 63/94 (67%), Positives = 74/94 (78%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+IV+ATPGRFLH+ +EM L L +IK VVFDEADRLFE+GF QL EI LPS+RQTLLF
Sbjct: 213 DIVIATPGRFLHLKVEMNLDLSSIKYVVFDEADRLFEMGFAAQLTEILHGLPSTRQTLLF 272
Query: 688 SATLPKMLVEFARAGLSDPTLDKIRVDWKLPSTL 789
SATLPK LVEFARAGL DPTL ++ + K+ L
Sbjct: 273 SATLPKSLVEFARAGLQDPTLVRLDTESKISPDL 306
Score = 91.9 bits (218), Expect = 2e-17
Identities = 47/82 (57%), Positives = 62/82 (75%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG 436
MARTGSGKTA FV+P++EKL + K R LILSP+RELALQTL+ V+ELGK T
Sbjct: 134 MARTGSGKTAAFVIPMIEKLKSHSTK----FGARGLILSPSRELALQTLKVVKELGKGTD 189
Query: 437 LTSAAILGGESIEQQFNVMSGS 502
L S ++GG+S+E+QF +M+G+
Sbjct: 190 LKSVLLVGGDSLEEQFGMMAGN 211
Score = 56.0 bits (129), Expect = 1e-06
Identities = 25/51 (49%), Positives = 34/51 (66%)
Frame = +3
Query: 129 GAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
G FQ+MGL+ +LK I ++G+ PTPIQRKTIP+ + +DVV G K
Sbjct: 91 GGFQAMGLNANLLKAIARKGFSVPTPIQRKTIPVIMEDQDVVGMARTGSGK 141
>UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2;
Sordariomycetes|Rep: ATP-dependent RNA helicase DBP10 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 914
Score = 124 bits (299), Expect = 3e-27
Identities = 60/94 (63%), Positives = 73/94 (77%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+I++ATPGRFLH+ +EM L L +IK VVFDEADRLFE+GF QL EI LP SRQTLLF
Sbjct: 212 DIIIATPGRFLHLKVEMSLDLSSIKYVVFDEADRLFEMGFATQLTEILHSLPPSRQTLLF 271
Query: 688 SATLPKMLVEFARAGLSDPTLDKIRVDWKLPSTL 789
SATLP+ LVEFARAGL DP+L ++ + K+ L
Sbjct: 272 SATLPRSLVEFARAGLQDPSLVRLDAETKISPDL 305
Score = 87.0 bits (206), Expect = 5e-16
Identities = 44/88 (50%), Positives = 61/88 (69%)
Frame = +2
Query: 233 IDRERCCSMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFV 412
+DR MARTGSGKTA FV+P++E+L + + RALI+SP+RELALQTL+ V
Sbjct: 125 LDRRDVVGMARTGSGKTAAFVIPMIERLRAHSARV----GARALIMSPSRELALQTLKVV 180
Query: 413 RELGKFTGLTSAAILGGESIEQQFNVMS 496
+E GK T L + ++GG+S+E QF M+
Sbjct: 181 KEFGKGTDLKTVLLVGGDSLEDQFGFMT 208
Score = 56.0 bits (129), Expect = 1e-06
Identities = 26/52 (50%), Positives = 36/52 (69%)
Frame = +3
Query: 126 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
SG FQ+MGL+ +L+ IT++G+ PTPIQRK+IP+ L +DVV G K
Sbjct: 89 SGGFQAMGLNPSLLQAITRKGFAVPTPIQRKSIPLILDRRDVVGMARTGSGK 140
>UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 871
Score = 123 bits (296), Expect = 6e-27
Identities = 58/94 (61%), Positives = 75/94 (79%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+I++ATPGR LH+ +EM L+L ++ VVFDEADRLFE+GF +QL E R+P SRQTLLF
Sbjct: 145 DILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQDQLTETLKRIPESRQTLLF 204
Query: 688 SATLPKMLVEFARAGLSDPTLDKIRVDWKLPSTL 789
SATLPKMLV+FA+AGL+DP L ++ VD K+ L
Sbjct: 205 SATLPKMLVDFAKAGLTDPMLVRLDVDEKVSDKL 238
Score = 92.7 bits (220), Expect = 1e-17
Identities = 46/87 (52%), Positives = 66/87 (75%)
Frame = +2
Query: 233 IDRERCCSMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFV 412
+D + +M+RTGSGKTA FV+P+L+KL + T G +RAL++SPTRELALQT + V
Sbjct: 59 MDGKDVVAMSRTGSGKTAAFVIPMLQKL---KRRDTTG--IRALMVSPTRELALQTFKVV 113
Query: 413 RELGKFTGLTSAAILGGESIEQQFNVM 493
+ELG+FTGL A ++GG+ IE+QF+ +
Sbjct: 114 KELGRFTGLRCACLVGGDQIEEQFSTI 140
Score = 58.8 bits (136), Expect = 1e-07
Identities = 27/52 (51%), Positives = 33/52 (63%)
Frame = +3
Query: 126 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+G +Q +GL V K I K+G+ QPTPIQRKTIP + GKDVV G K
Sbjct: 23 AGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGK 74
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 123 bits (296), Expect = 6e-27
Identities = 60/94 (63%), Positives = 76/94 (80%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+IVVATPGRFLH+ +EM L+L +I+ VVFDEADRLFE+GF QL EI LP+SRQTLLF
Sbjct: 191 DIVVATPGRFLHLKVEMKLELSSIEYVVFDEADRLFEMGFAAQLTEILHALPTSRQTLLF 250
Query: 688 SATLPKMLVEFARAGLSDPTLDKIRVDWKLPSTL 789
SATLP+ LV+FA+AGL DP L ++ V+ K+ + L
Sbjct: 251 SATLPRTLVDFAKAGLQDPVLVRLDVESKVSADL 284
Score = 87.8 bits (208), Expect = 3e-16
Identities = 45/81 (55%), Positives = 58/81 (71%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG 436
MARTGSGKTA FV+P++E L N RALILSP RELALQT++ V++ K T
Sbjct: 112 MARTGSGKTAAFVIPMIEHL----KSTLANSNTRALILSPNRELALQTVKVVKDFSKGTD 167
Query: 437 LTSAAILGGESIEQQFNVMSG 499
L S AI+GG S+E+QF+++SG
Sbjct: 168 LRSVAIVGGVSLEEQFSLLSG 188
Score = 60.1 bits (139), Expect = 6e-08
Identities = 28/49 (57%), Positives = 35/49 (71%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
FQSMGL+ +L+ I K+G+K PTPIQRKTIP+ L G+DVV G K
Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGK 119
>UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP10 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 878
Score = 120 bits (289), Expect = 4e-26
Identities = 57/94 (60%), Positives = 73/94 (77%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+I++ATPGRFLH+ +EM L L +++ +VFDEADRLFE+GF QL EI LP+SRQTLLF
Sbjct: 200 DIIIATPGRFLHLKVEMGLDLSSVQYIVFDEADRLFEMGFAAQLAEILYALPTSRQTLLF 259
Query: 688 SATLPKMLVEFARAGLSDPTLDKIRVDWKLPSTL 789
SATLPK LVEFARAGL +P L ++ + K+ L
Sbjct: 260 SATLPKSLVEFARAGLQEPKLIRLDAESKISPDL 293
Score = 83.0 bits (196), Expect = 8e-15
Identities = 41/80 (51%), Positives = 59/80 (73%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG 436
MARTGSGKTA FV+P++E+L + K R +I+SP+RELALQTL+ V+E G+ T
Sbjct: 121 MARTGSGKTAAFVIPMIERLKTHSAKV----GARGVIMSPSRELALQTLKVVKEFGRGTD 176
Query: 437 LTSAAILGGESIEQQFNVMS 496
L + ++GG+S+E+QFN M+
Sbjct: 177 LRTILLVGGDSLEEQFNSMT 196
Score = 58.0 bits (134), Expect = 3e-07
Identities = 26/51 (50%), Positives = 34/51 (66%)
Frame = +3
Query: 129 GAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
G FQ+MGL+ +LK I ++G+K PTPIQRK +P+ L G DVV G K
Sbjct: 78 GGFQAMGLNVALLKAIAQKGFKIPTPIQRKAVPLILQGDDVVGMARTGSGK 128
>UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Chaetomium globosum|Rep: ATP-dependent RNA helicase
DBP10 - Chaetomium globosum (Soil fungus)
Length = 762
Score = 120 bits (289), Expect = 4e-26
Identities = 57/94 (60%), Positives = 72/94 (76%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+I++ATPGRFLH+ +EM L L +++ VVFDEADRLFE+GF QL EI LP SRQTLLF
Sbjct: 208 DIIIATPGRFLHLKVEMSLNLSSVRYVVFDEADRLFEMGFAAQLTEILHALPPSRQTLLF 267
Query: 688 SATLPKMLVEFARAGLSDPTLDKIRVDWKLPSTL 789
SATLP LVEFARAGL +P+L ++ + K+ L
Sbjct: 268 SATLPSSLVEFARAGLQEPSLIRLDAETKVSPDL 301
Score = 88.2 bits (209), Expect = 2e-16
Identities = 43/90 (47%), Positives = 65/90 (72%)
Frame = +2
Query: 233 IDRERCCSMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFV 412
++R MARTGSGKTA FV+P++E+L + + RA+I+SP+RELALQTL+ V
Sbjct: 121 LERRDVVGMARTGSGKTAAFVIPMIERLKAHSARV----GARAIIMSPSRELALQTLKVV 176
Query: 413 RELGKFTGLTSAAILGGESIEQQFNVMSGS 502
+ELGK T L + ++GG+S+E+QF +M+ +
Sbjct: 177 KELGKGTDLKTVLLVGGDSLEEQFGLMAAN 206
Score = 57.6 bits (133), Expect = 3e-07
Identities = 26/52 (50%), Positives = 36/52 (69%)
Frame = +3
Query: 126 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
SG FQ+MGL+ +L+ I+++G+ PTPIQRKTIP+ L +DVV G K
Sbjct: 85 SGGFQAMGLNSNLLRAISRKGFSVPTPIQRKTIPLVLERRDVVGMARTGSGK 136
>UniRef50_Q4P3W3 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP10 -
Ustilago maydis (Smut fungus)
Length = 1154
Score = 117 bits (281), Expect = 4e-25
Identities = 56/95 (58%), Positives = 75/95 (78%), Gaps = 1/95 (1%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
++V+ATPGR LH+ +EM L L +++ VVFDEADRLFE+GF EQL+E+ RLP +RQTLLF
Sbjct: 282 DVVIATPGRMLHLTVEMNLDLKSVEYVVFDEADRLFEMGFAEQLEEMLLRLPPTRQTLLF 341
Query: 688 SATLPKMLVEFARAGL-SDPTLDKIRVDWKLPSTL 789
SATLPK LVEF +AGL ++P L ++ D K+ + L
Sbjct: 342 SATLPKKLVEFTKAGLQANPKLVRLDADSKISADL 376
Score = 61.3 bits (142), Expect = 3e-08
Identities = 35/95 (36%), Positives = 58/95 (61%), Gaps = 13/95 (13%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVREL----- 421
MARTGSGKT +++P++ +L N + +P +++LIL P+RELA+Q LR +E+
Sbjct: 189 MARTGSGKTLAYLIPLINRL---NGRHSPTFGIKSLILCPSRELAVQILRVGKEIARGWK 245
Query: 422 --------GKFTGLTSAAILGGESIEQQFNVMSGS 502
+ + A I+GGES+++QF +MS +
Sbjct: 246 ADAGEGQDSRGEAIRWAIIVGGESLDEQFGIMSNN 280
Score = 44.8 bits (101), Expect = 0.003
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +3
Query: 129 GAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALT--GKDVVQWPELGPEKQL 287
G+FQSMGL +L+ + RG+ PTPIQR+ IP ++ +DVV G K L
Sbjct: 144 GSFQSMGLHPSLLRSLLIRGFTTPTPIQRQAIPAIMSQPPRDVVGMARTGSGKTL 198
>UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP10
- Saccharomyces cerevisiae (Baker's yeast)
Length = 995
Score = 116 bits (279), Expect = 7e-25
Identities = 53/94 (56%), Positives = 73/94 (77%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
++++ATPGRFLH+ +EM L L +++ VVFDEADRLFE+GF EQL E+ A LP++RQTLLF
Sbjct: 259 DVIIATPGRFLHLKVEMNLDLKSVEYVVFDEADRLFEMGFQEQLNELLASLPTTRQTLLF 318
Query: 688 SATLPKMLVEFARAGLSDPTLDKIRVDWKLPSTL 789
SATLP LV+F +AGL +P L ++ + K+ L
Sbjct: 319 SATLPNSLVDFVKAGLVNPVLVRLDAETKVSENL 352
Score = 77.0 bits (181), Expect = 5e-13
Identities = 41/80 (51%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGK-NLRALILSPTRELALQTLRFVRELGKFT 433
MARTGSGKTA F+LP++EKL K GK RA+ILSP+RELA+QT ++ + T
Sbjct: 180 MARTGSGKTAAFILPMVEKL-----KSHSGKIGARAVILSPSRELAMQTFNVFKDFARGT 234
Query: 434 GLTSAAILGGESIEQQFNVM 493
L S + GG+S+E+QF +M
Sbjct: 235 ELRSVLLTGGDSLEEQFGMM 254
Score = 56.8 bits (131), Expect = 6e-07
Identities = 26/51 (50%), Positives = 34/51 (66%)
Frame = +3
Query: 129 GAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
G+F S GLS VL I ++G++QPTPIQRKTIP+ L +D+V G K
Sbjct: 137 GSFPSFGLSKIVLNNIKRKGFRQPTPIQRKTIPLILQSRDIVGMARTGSGK 187
>UniRef50_Q5KMS9 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP10 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 802
Score = 113 bits (272), Expect = 5e-24
Identities = 53/94 (56%), Positives = 72/94 (76%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+IV+ATPGRFLH+ +EM + L +++ V++DEADRLFE+GF QLQEI RLPS+RQ LLF
Sbjct: 174 DIVIATPGRFLHLIVEMHMDLRHLQTVIYDEADRLFEMGFDVQLQEILHRLPSTRQNLLF 233
Query: 688 SATLPKMLVEFARAGLSDPTLDKIRVDWKLPSTL 789
SATLP + EFA+AGL +P L ++ + K+ L
Sbjct: 234 SATLPSSVAEFAKAGLVNPLLVRLDAEQKISPDL 267
Score = 46.0 bits (104), Expect = 0.001
Identities = 24/57 (42%), Positives = 36/57 (63%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGK 427
MARTGSGKT +++P+L++ G+ RALIL P+RELA+Q ++L +
Sbjct: 72 MARTGSGKTLAYLIPLLQR----TGSTHHGQGPRALILCPSRELAVQIYTVGKDLAR 124
>UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 1091
Score = 110 bits (265), Expect = 3e-23
Identities = 50/94 (53%), Positives = 69/94 (73%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+I++ATPGR +H +E + L ++ +VFDEADRLFE+GF EQL EI ++L +RQTLLF
Sbjct: 352 DIIIATPGRLMHHLLETGMSLSKVQYIVFDEADRLFEMGFNEQLTEILSKLSENRQTLLF 411
Query: 688 SATLPKMLVEFARAGLSDPTLDKIRVDWKLPSTL 789
SATLP +LV+F RAGL++P L + D K+ L
Sbjct: 412 SATLPSLLVDFVRAGLNNPKLINLDTDTKISENL 445
Score = 76.2 bits (179), Expect = 9e-13
Identities = 40/84 (47%), Positives = 58/84 (69%)
Frame = +2
Query: 233 IDRERCCSMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFV 412
+D MARTGSGKT FV+P+++KL ++ T G +RA+ILSPTRELA+QT + V
Sbjct: 265 LDGHDIVGMARTGSGKTGAFVIPMIQKL--GDHSTTVG--VRAVILSPTRELAIQTFKVV 320
Query: 413 RELGKFTGLTSAAILGGESIEQQF 484
++ + T L + I+GG+S+E QF
Sbjct: 321 KDFSQGTQLRTILIVGGDSMEDQF 344
Score = 55.2 bits (127), Expect = 2e-06
Identities = 26/52 (50%), Positives = 34/52 (65%)
Frame = +3
Query: 126 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+G FQSM L+ +LK I K+G+ PTPIQRK+IP+ L G D+V G K
Sbjct: 229 TGGFQSMDLTKNLLKAILKKGFNVPTPIQRKSIPMILDGHDIVGMARTGSGK 280
>UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 29; n=4; core eudicotyledons|Rep: Putative
DEAD-box ATP-dependent RNA helicase 29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 845
Score = 97.1 bits (231), Expect = 4e-19
Identities = 47/95 (49%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMC-LKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
++++ATPGR +H+ E+ + L ++ VVFDEAD LF +GF EQL +I +L +RQTLL
Sbjct: 150 DVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQILTQLSENRQTLL 209
Query: 685 FSATLPKMLVEFARAGLSDPTLDKIRVDWKLPSTL 789
FSATLP L EFA+AGL +P L ++ V+ K+ L
Sbjct: 210 FSATLPSALAEFAKAGLREPQLVRLDVENKISPDL 244
Score = 90.2 bits (214), Expect = 5e-17
Identities = 45/81 (55%), Positives = 61/81 (75%)
Frame = +2
Query: 254 SMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT 433
+MARTGSGKTA F++P+LEKL + P +RALILSPTR+LA QTL+F +ELGKFT
Sbjct: 70 AMARTGSGKTAAFLIPMLEKL----KQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFT 125
Query: 434 GLTSAAILGGESIEQQFNVMS 496
L + ++GG+S+E QF ++
Sbjct: 126 DLRVSLLVGGDSMEDQFEELT 146
Score = 56.8 bits (131), Expect = 6e-07
Identities = 27/52 (51%), Positives = 33/52 (63%)
Frame = +3
Query: 126 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
SG F+S+ L V I K+GYK PTPIQRKT+P+ L+G DVV G K
Sbjct: 27 SGGFESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGK 78
>UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-dependent
RNA helicase; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ATP-dependent RNA helicase -
Ornithorhynchus anatinus
Length = 580
Score = 94.3 bits (224), Expect = 3e-18
Identities = 48/84 (57%), Positives = 61/84 (72%)
Frame = +2
Query: 233 IDRERCCSMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFV 412
+D + +MARTGSGKTACF++P+ EKL + + RAL+LSPTRELALQT +F
Sbjct: 185 LDGKDVVAMARTGSGKTACFLIPMFEKLKAHSAQA----GARALVLSPTRELALQTGKFT 240
Query: 413 RELGKFTGLTSAAILGGESIEQQF 484
+ELGKFTGL A ILGG+ +E QF
Sbjct: 241 KELGKFTGLKMALILGGDRMEDQF 264
Score = 77.4 bits (182), Expect = 4e-13
Identities = 35/52 (67%), Positives = 39/52 (75%)
Frame = +3
Query: 126 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
SG FQSMGLS+PV KG+ K+GYK PTPIQRKTIP+ L GKDVV G K
Sbjct: 149 SGGFQSMGLSYPVFKGVMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGK 200
Score = 52.0 bits (119), Expect = 2e-05
Identities = 23/42 (54%), Positives = 32/42 (76%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGE 633
+I++ATPGR +H+ +EM LKL +++ VVFDEADR G GE
Sbjct: 272 DIIIATPGRLMHVAVEMNLKLQSVEYVVFDEADRCAG-GLGE 312
>UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;
n=3; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 29 - Oryza sativa subsp. japonica (Rice)
Length = 851
Score = 93.5 bits (222), Expect = 6e-18
Identities = 47/95 (49%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEM-CLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
+I++ATPGR +H E+ L L ++ VVFDEAD LF LG +QL +I +L +RQTLL
Sbjct: 171 DIIIATPGRLVHHLAEVEDLNLRTVEYVVFDEADSLFSLGLIQQLHDILHKLSDTRQTLL 230
Query: 685 FSATLPKMLVEFARAGLSDPTLDKIRVDWKLPSTL 789
FSATLP+ L +FA+AGL DP + ++ +D K+ L
Sbjct: 231 FSATLPQALADFAKAGLRDPQIVRLDLDKKISPDL 265
Score = 87.4 bits (207), Expect = 4e-16
Identities = 42/81 (51%), Positives = 61/81 (75%)
Frame = +2
Query: 254 SMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT 433
+MARTGSGKTA F++P++++L + G +RALILSPTR+LA QTL+F ++LGKFT
Sbjct: 91 AMARTGSGKTAAFLVPMIQRL----RRHDAGAGIRALILSPTRDLATQTLKFAQQLGKFT 146
Query: 434 GLTSAAILGGESIEQQFNVMS 496
L + I+GG+S+E QF ++
Sbjct: 147 DLKISLIVGGDSMESQFEELA 167
Score = 55.6 bits (128), Expect = 1e-06
Identities = 24/52 (46%), Positives = 32/52 (61%)
Frame = +3
Query: 126 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
SG F+SMGL V +G+ +GY+ PTPIQRK +P+ L G D+ G K
Sbjct: 48 SGGFESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGK 99
>UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n=7;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 803
Score = 91.9 bits (218), Expect = 2e-17
Identities = 46/94 (48%), Positives = 61/94 (64%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
++VVATPGR LHI E L L +++ +V DEADRLFELG Q+ I +LP S Q LF
Sbjct: 144 DVVVATPGRLLHIMEEASLHLTSVRCLVLDEADRLFELGLQPQIGAIMQKLPESCQRALF 203
Query: 688 SATLPKMLVEFARAGLSDPTLDKIRVDWKLPSTL 789
SAT+P +L EF AGL +P + ++ + KL L
Sbjct: 204 SATMPTVLAEFTSAGLHNPVVIRLDSEMKLSDQL 237
Score = 72.9 bits (171), Expect = 8e-12
Identities = 40/83 (48%), Positives = 57/83 (68%)
Frame = +2
Query: 254 SMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT 433
+MARTGSGKTA F++P+L L + G +R L+LSPTREL+LQ LR L KF
Sbjct: 64 AMARTGSGKTAAFLIPMLNTLKA--HAKIVG--IRGLVLSPTRELSLQILRNGFALNKFL 119
Query: 434 GLTSAAILGGESIEQQFNVMSGS 502
L AA++GG+S++QQF +++ +
Sbjct: 120 DLRFAALVGGDSMDQQFELLASN 142
Score = 52.8 bits (121), Expect = 1e-05
Identities = 26/51 (50%), Positives = 29/51 (56%)
Frame = +3
Query: 129 GAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
G FQS L P+L I K+G+ PTPIQRK IP L G DVV G K
Sbjct: 22 GGFQSFNLEKPLLDAILKQGFSVPTPIQRKAIPPMLQGNDVVAMARTGSGK 72
>UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_99,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 706
Score = 91.1 bits (216), Expect = 3e-17
Identities = 41/94 (43%), Positives = 66/94 (70%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+I++ TPGR L +E LKL +++V++DEAD LFE+G +QL++I + LPS +Q+L+F
Sbjct: 132 DILICTPGRVLQHLLEDRLKLSRVQMVIYDEADFLFEMGLADQLKQILSHLPSQKQSLMF 191
Query: 688 SATLPKMLVEFARAGLSDPTLDKIRVDWKLPSTL 789
SAT+P+ L FA GL D K+ +++LP ++
Sbjct: 192 SATIPEQLSMFASVGLKDYIFCKLDKEFQLPDSM 225
Score = 63.3 bits (147), Expect = 7e-09
Identities = 38/96 (39%), Positives = 58/96 (60%), Gaps = 6/96 (6%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
++TGSGKTA F++P++ KL N+ G +R LIL PTRELALQ ++ L KF+ +
Sbjct: 54 SKTGSGKTAAFLIPLINKL--QNHSTVVG--IRGLILLPTRELALQIASVLKALLKFSDI 109
Query: 440 TSAAILGGESIEQQFNVMSGS------SPT*LLQHL 529
+ ++GG E QF ++ + +P +LQHL
Sbjct: 110 QYSIMVGGHGFEGQFESLASNPDILICTPGRVLQHL 145
Score = 51.2 bits (117), Expect = 3e-05
Identities = 24/52 (46%), Positives = 32/52 (61%)
Frame = +3
Query: 126 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
SG F+SMGL + + I +G+ PTPIQRK IP L G+D+V + G K
Sbjct: 9 SGGFESMGLIPELYRAIKSQGFNVPTPIQRKAIPQILAGRDIVACSKTGSGK 60
>UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium hominis
Length = 868
Score = 89.4 bits (212), Expect = 9e-17
Identities = 43/94 (45%), Positives = 62/94 (65%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+IVVATPGR H IE L L +KI++ DEADRLFE+G Q+++I +P +RQ +L
Sbjct: 127 DIVVATPGRLFHHIIEAGLSLIAVKIIILDEADRLFEMGLASQIEKILESIPKNRQCVLV 186
Query: 688 SATLPKMLVEFARAGLSDPTLDKIRVDWKLPSTL 789
SAT+P L F++ L++P + +I D+ L TL
Sbjct: 187 SATMPTALASFSKVMLNEPEVIQIDSDYILSETL 220
Score = 80.6 bits (190), Expect = 4e-14
Identities = 42/83 (50%), Positives = 59/83 (71%)
Frame = +2
Query: 254 SMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT 433
+MARTGSGKTA FVLP++E+L +++ +R ++LSPTRELALQT R VR+L T
Sbjct: 46 AMARTGSGKTAGFVLPMIERLGCSHSQIV---GIRGVVLSPTRELALQTYRVVRKLACKT 102
Query: 434 GLTSAAILGGESIEQQFNVMSGS 502
L A+ GG S+++QF +SG+
Sbjct: 103 NLVVCALTGGSSLDRQFESLSGN 125
Score = 49.2 bits (112), Expect = 1e-04
Identities = 25/53 (47%), Positives = 29/53 (54%)
Frame = +3
Query: 123 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+ G FQS G S +L+ I GY PTPIQRK P L G+DVV G K
Sbjct: 2 AKGTFQSFGFSPKLLESIKIIGYSLPTPIQRKCFPSILAGRDVVAMARTGSGK 54
>UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 703
Score = 85.4 bits (202), Expect = 1e-15
Identities = 46/95 (48%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
++++ATPGR L I E L ++I+V DEAD LFE G Q+ I LP Q+LLF
Sbjct: 122 DVIIATPGRLLQIIAETQYSLSRVQIIVIDEADLLFEQGLEPQMTAILKLLPEKHQSLLF 181
Query: 688 SATLPKMLVEFARAGLSDPTLDKIRVDW-KLPSTL 789
SAT+P +L EF R LS T+ IR+D KLP TL
Sbjct: 182 SATVPSVLAEFTRINLSRATV--IRIDQSKLPKTL 214
Score = 67.3 bits (157), Expect = 4e-10
Identities = 35/81 (43%), Positives = 54/81 (66%)
Frame = +2
Query: 254 SMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT 433
+M++TGSGKTA F+LPI++KL N+ + R LI++P+RELALQT + ++ T
Sbjct: 42 AMSKTGSGKTASFLLPIVQKL----NEHSTITGCRCLIITPSRELALQTGHYFQKYASQT 97
Query: 434 GLTSAAILGGESIEQQFNVMS 496
L A I+GGE++ QF ++
Sbjct: 98 NLKCAQIIGGEALPPQFESLT 118
Score = 36.7 bits (81), Expect = 0.67
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +3
Query: 150 LSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
L P LK T Y++PTPIQ++ IP+ L DVV + G K
Sbjct: 8 LEGPALKVATTM-YRKPTPIQKEVIPVVLADHDVVAMSKTGSGK 50
>UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Type III restriction enzyme, res subunit family protein
- Tetrahymena thermophila SB210
Length = 1130
Score = 83.4 bits (197), Expect = 6e-15
Identities = 37/84 (44%), Positives = 57/84 (67%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+I++ATPGR + E L L+ ++ ++FDE D LFE+GF +Q++ I ++ RQTL+F
Sbjct: 421 DIIIATPGRLSQLIDETDLSLNKVEFLIFDECDYLFEMGFADQMKTILKKVSQQRQTLMF 480
Query: 688 SATLPKMLVEFARAGLSDPTLDKI 759
SAT+P+ L FARAGL + K+
Sbjct: 481 SATIPEELSSFARAGLKEYVFVKL 504
Score = 67.3 bits (157), Expect = 4e-10
Identities = 37/81 (45%), Positives = 51/81 (62%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
+RTGSGKTA F++P++ KL N+ G RALI+ PTRELALQ ++ KFT L
Sbjct: 343 SRTGSGKTAAFIIPLINKL--QNHSRIVGA--RALIVVPTRELALQIASVLKTFIKFTDL 398
Query: 440 TSAAILGGESIEQQFNVMSGS 502
T I+GG +E QF ++ +
Sbjct: 399 TYTLIVGGHGLEGQFESLASN 419
Score = 59.3 bits (137), Expect = 1e-07
Identities = 27/51 (52%), Positives = 32/51 (62%)
Frame = +3
Query: 129 GAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
G F+SM L +PV K I RG+ PTPIQRK IP+ L G+DVV G K
Sbjct: 299 GGFESMNLVYPVYKAIKTRGFNMPTPIQRKAIPLILEGRDVVACSRTGSGK 349
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 82.6 bits (195), Expect = 1e-14
Identities = 41/94 (43%), Positives = 59/94 (62%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+I+VATPGR I + L+ +++V FDEAD +FE GF EQ+ +I LP +RQ LLF
Sbjct: 134 DIIVATPGRLTFILEGANISLNRVEMVCFDEADLMFESGFSEQVSDIMRMLPPTRQILLF 193
Query: 688 SATLPKMLVEFARAGLSDPTLDKIRVDWKLPSTL 789
SATLP+ L EF + L P + ++ + +L L
Sbjct: 194 SATLPRNLAEFLKNTLKQPEIIRLDTEERLSPDL 227
Score = 77.0 bits (181), Expect = 5e-13
Identities = 41/83 (49%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Frame = +2
Query: 254 SMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT 433
+MARTGSGKTA +++PI+ +L T G +R+LI+ PTRELALQT++ ELGK T
Sbjct: 55 AMARTGSGKTAAYLVPIINRL---ETHSTEG--VRSLIICPTRELALQTIKVFNELGKLT 109
Query: 434 GLTSAAILGGESIEQQF-NVMSG 499
L ++ I+GG + QF N+ SG
Sbjct: 110 NLKASLIIGGSKLSDQFDNLSSG 132
Score = 61.7 bits (143), Expect = 2e-08
Identities = 28/53 (52%), Positives = 34/53 (64%)
Frame = +3
Query: 123 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
SSG FQSMGL+ L G+ K+GY+ PTPIQRK IP L G D++ G K
Sbjct: 11 SSGGFQSMGLNKQTLLGVLKKGYRVPTPIQRKAIPAILRGNDIIAMARTGSGK 63
>UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella frigidimarina (strain NCIMB
400)
Length = 421
Score = 81.8 bits (193), Expect = 2e-14
Identities = 38/85 (44%), Positives = 59/85 (69%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
++I+VATPGR L + + L L + +VFDEADR+ ++GF +++ E+ RLPS+RQTLL
Sbjct: 134 THILVATPGRLLDLLRKRALSLSQLTHLVFDEADRMLDMGFKDEIVEVLKRLPSTRQTLL 193
Query: 685 FSATLPKMLVEFARAGLSDPTLDKI 759
FSATL ++ F+R L P + ++
Sbjct: 194 FSATLDDRMLSFSRRLLRSPQVIEV 218
Score = 53.2 bits (122), Expect = 7e-06
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLV--------PNNKPTPGKNLRALILSPTRELALQTLRFVR 415
A+TG+GKTA F LP+L +LL P+ + + AL+L PTRELA Q +
Sbjct: 45 AQTGTGKTAAFALPLLHQLLTHQDNLAAQPDTQHINSTPITALVLVPTRELAQQVHSSIE 104
Query: 416 ELGKFTGLTSAAILGGESIEQQFNVMSGSS 505
+ + +TS + GG SI +Q ++ +
Sbjct: 105 QYAYGSSVTSVMVYGGVSIGEQIRQLANGT 134
Score = 40.7 bits (91), Expect = 0.041
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQLVXXXXXXR 311
+F + L ++ + + Y+QPTPIQ + IP+ L+GKDV+ + G K
Sbjct: 2 SFADLSLHPILINRLAELKYQQPTPIQLQAIPVILSGKDVMAGAQTGTGKTAAFALPLLH 61
Query: 312 NFLFRTTNL 338
L NL
Sbjct: 62 QLLTHQDNL 70
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 81.4 bits (192), Expect = 2e-14
Identities = 36/80 (45%), Positives = 56/80 (70%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
++++VATPGR + + L+L + +V DEAD++ +LGF L++I LP+ RQT+L
Sbjct: 195 ADLIVATPGRLIDLLDRKALRLSETRFLVLDEADQMLDLGFIHALRKIAPLLPAERQTML 254
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSAT+PK + E +RA L+DP
Sbjct: 255 FSATMPKQMEELSRAYLTDP 274
Score = 58.8 bits (136), Expect = 1e-07
Identities = 32/75 (42%), Positives = 45/75 (60%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG 436
+A+TG+GKTA F LP+L+ L+ KP P + R LIL+PTREL Q +R + +
Sbjct: 114 IAQTGTGKTAAFGLPLLDALMKAGTKPAP-RTCRGLILAPTRELVSQICESLRAFTEGSH 172
Query: 437 LTSAAILGGESIEQQ 481
L I+GG +I Q
Sbjct: 173 LKLQVIVGGVAIGPQ 187
Score = 38.3 bits (85), Expect = 0.22
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F +GLS ++ G+ + PTPIQ + IP L G+DV+ + G K
Sbjct: 73 FDMLGLSPRLVAGLAAQNITDPTPIQTRAIPHGLNGRDVLGIAQTGTGK 121
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 81.4 bits (192), Expect = 2e-14
Identities = 37/79 (46%), Positives = 53/79 (67%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+IVVATPGR L + ++ L L++I +VFDEADR+F++GF +++I LP RQ LLF
Sbjct: 126 DIVVATPGRLLDLALQNALSLEHIDTLVFDEADRMFDMGFIHDIKQIVKMLPEKRQNLLF 185
Query: 688 SATLPKMLVEFARAGLSDP 744
SAT P ++ + L DP
Sbjct: 186 SATYPSEVMSLCNSMLKDP 204
Score = 56.0 bits (129), Expect = 1e-06
Identities = 34/79 (43%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKL-LVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG 436
ARTG+GKTA F LPILEKL NK P R L+L PTRELA Q + ++ K
Sbjct: 45 ARTGTGKTAAFALPILEKLSSKERNKKRP--QTRVLVLVPTRELANQVTQNIKSYAKKLP 102
Query: 437 LTSAAILGGESIEQQFNVM 493
+ + GG S Q +
Sbjct: 103 FKTLPVFGGVSSYPQIQAL 121
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 80.6 bits (190), Expect = 4e-14
Identities = 40/78 (51%), Positives = 52/78 (66%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFS 690
IV+ATPGR + + +LD I+ +V DEADR+ ++GF QL I RLP RQTLLFS
Sbjct: 124 IVIATPGRLVDHLEQGNARLDGIEALVLDEADRMLDMGFKPQLDRILRRLPKQRQTLLFS 183
Query: 691 ATLPKMLVEFARAGLSDP 744
AT+ + +FARA L DP
Sbjct: 184 ATMAGEVADFARAHLRDP 201
Score = 54.8 bits (126), Expect = 2e-06
Identities = 32/74 (43%), Positives = 44/74 (59%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A TG+GKTA F+LP++++L KP RAL+L+PTRELALQ + G +
Sbjct: 48 AATGTGKTAAFLLPLIDRLA---GKP----GTRALVLAPTRELALQIGEELERFGHARRV 100
Query: 440 TSAAILGGESIEQQ 481
A I+GG + QQ
Sbjct: 101 RGAVIIGGVGMAQQ 114
Score = 42.7 bits (96), Expect = 0.010
Identities = 21/53 (39%), Positives = 30/53 (56%)
Frame = +3
Query: 123 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
S+ +F + LS L + + G++ PTPIQ + IP AL GKDV+ G K
Sbjct: 2 STTSFAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGK 54
>UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
drs-1 - Neurospora crassa
Length = 829
Score = 80.6 bits (190), Expect = 4e-14
Identities = 39/80 (48%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Frame = +1
Query: 508 NIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
++V+ATPGRF+ H+ +D I+I+V DEADR+ E GF ++L EI LP SRQT+L
Sbjct: 416 DVVIATPGRFIDHMRNSASFAVDTIEILVLDEADRMLEDGFADELNEILTTLPKSRQTML 475
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSAT+ + RAGL+ P
Sbjct: 476 FSATMTSSVDRLIRAGLNKP 495
Score = 62.5 bits (145), Expect = 1e-08
Identities = 31/74 (41%), Positives = 41/74 (55%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQLVXXXXXXR 311
+FQ M LS P+L+G+T G+ +PTPIQ KTIPI+L GKDVV G K
Sbjct: 294 SFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVPILE 353
Query: 312 NFLFRTTNLHLERI 353
L+R + R+
Sbjct: 354 RLLYRPKKVPTTRV 367
Score = 57.2 bits (132), Expect = 4e-07
Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLV-PNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG 436
A TGSGKTA FV+PILE+LL P PT R +IL+PTRELA+Q +L T
Sbjct: 337 AVTGSGKTAAFVVPILERLLYRPKKVPTT----RVVILTPTRELAIQCHAVAVKLASHTD 392
Query: 437 LTSAAILGGESIEQQ 481
+ +GG S++ Q
Sbjct: 393 IKFCLAVGGLSLKVQ 407
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 79.4 bits (187), Expect = 1e-13
Identities = 37/78 (47%), Positives = 54/78 (69%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFS 690
++VATPGR L + LKL +++ +V DEADR+ ++GF +++I A+LP RQTL FS
Sbjct: 142 VLVATPGRLLDLVQSNGLKLGSVEFLVLDEADRMLDMGFINDIRKIVAKLPIKRQTLFFS 201
Query: 691 ATLPKMLVEFARAGLSDP 744
AT+PK + E A + L DP
Sbjct: 202 ATMPKDIAELADSMLRDP 219
Score = 63.7 bits (148), Expect = 5e-09
Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG 436
+A+TG+GKTA F LPIL +LL KP P K R L+LSPTREL+ Q L G+
Sbjct: 59 IAQTGTGKTASFALPILHRLLEHRIKPQP-KTTRVLVLSPTRELSGQILDSFNAYGRHIR 117
Query: 437 LTSAAILGGESIEQQF-NVMSG 499
L+S +GG + +Q ++M G
Sbjct: 118 LSSTLAIGGVPMGRQVRSLMQG 139
Score = 52.4 bits (120), Expect = 1e-05
Identities = 23/50 (46%), Positives = 33/50 (66%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+FQ GL+ P+ + +++ Y PTPIQ +TIP ALTG+DVV + G K
Sbjct: 17 SFQDFGLAEPIARALSEENYVTPTPIQAQTIPTALTGRDVVGIAQTGTGK 66
>UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: DEAD/DEAH box
helicase-like - Pseudoalteromonas atlantica (strain T6c
/ BAA-1087)
Length = 458
Score = 79.4 bits (187), Expect = 1e-13
Identities = 37/79 (46%), Positives = 55/79 (69%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
++++ATPGR L + + L +N++I+VFDEADR+ +LGF + ++ I + LP RQTLLF
Sbjct: 125 DVLIATPGRLLDLYEQRALHFENLEILVFDEADRMLDLGFIDDVKRIQSLLPVKRQTLLF 184
Query: 688 SATLPKMLVEFARAGLSDP 744
SAT K + FAR L+ P
Sbjct: 185 SATFSKQIKHFAREMLNAP 203
Score = 56.4 bits (130), Expect = 8e-07
Identities = 31/76 (40%), Positives = 45/76 (59%)
Frame = +2
Query: 254 SMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT 433
++A+TG+GKTA F LP+L++L + G +R+LI++PTRELA Q V
Sbjct: 43 AVAQTGTGKTAAFTLPLLQRLAAKQSTKVQG--VRSLIVTPTRELAAQVAISVEIYSTQL 100
Query: 434 GLTSAAILGGESIEQQ 481
+ S A+ GG IE Q
Sbjct: 101 NIRSFAVYGGVRIEPQ 116
Score = 35.5 bits (78), Expect = 1.5
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+F+++GL ++ I +GY T IQR+ IP+ L D++ + G K
Sbjct: 2 SFEALGLRDELIHAIATQGYSVATDIQREAIPLVLAQHDLLAVAQTGTGK 51
>UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 542
Score = 79.0 bits (186), Expect = 1e-13
Identities = 39/83 (46%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Frame = +1
Query: 505 SNIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTL 681
++IVVATPGR L HI C N+K +V DEADR+ E+GF E++++I RLP +RQT+
Sbjct: 204 ASIVVATPGRLLDHIINTKCFIYRNLKCLVIDEADRIMEVGFEEEMRQILNRLPKNRQTM 263
Query: 682 LFSATLPKMLVEFARAGLSDPTL 750
LFSAT + + + A L P +
Sbjct: 264 LFSATQSEKVDDIANISLKQPVV 286
Score = 52.8 bits (121), Expect = 1e-05
Identities = 30/74 (40%), Positives = 46/74 (62%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
ARTGSGKT F++PI+E L + + G A+I+SPTRELA+QT + ++ +
Sbjct: 125 ARTGSGKTLAFLIPIVEILNKIHFQTRNGTG--AIIISPTRELAIQTFDVLEKILAHSER 182
Query: 440 TSAAILGGESIEQQ 481
T I+GG S +++
Sbjct: 183 TRTLIIGGSSKKKE 196
Score = 39.5 bits (88), Expect = 0.095
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
++S+ LS + K + + GY + T IQ ++IP+ L GKD++ G K L
Sbjct: 83 YKSLNLSEEIQKALEEAGYTKMTTIQARSIPLLLMGKDIMAKARTGSGKTL 133
>UniRef50_A7AWJ7 Cluster: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; n=1;
Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 783
Score = 79.0 bits (186), Expect = 1e-13
Identities = 40/94 (42%), Positives = 55/94 (58%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
++VVATPGR E + L + V DEAD+LFE+GF + I +RLP RQT+L
Sbjct: 149 DLVVATPGRLSQHIAEKSIDLTLVTHFVIDEADKLFEMGFMPDVYRILSRLPEKRQTMLV 208
Query: 688 SATLPKMLVEFARAGLSDPTLDKIRVDWKLPSTL 789
SATLP L EF GL +P + ++ D ++ L
Sbjct: 209 SATLPSELTEFVNFGLRNPVIAQVDKDMQINEQL 242
Score = 63.7 bits (148), Expect = 5e-09
Identities = 39/90 (43%), Positives = 57/90 (63%), Gaps = 4/90 (4%)
Frame = +2
Query: 239 RERCCSMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRE 418
R+ C +ARTGSGKTA ++ P+++ L+ + T G +R LIL PTRELALQ +++
Sbjct: 61 RDVVC-IARTGSGKTAAYLAPVVQ--LLEGHSRTVG--VRCLILLPTRELALQVSSVLKK 115
Query: 419 LGKFT----GLTSAAILGGESIEQQFNVMS 496
FT L SA ++GGES+E QF ++
Sbjct: 116 FIAFTKRDDALRSATLIGGESVEGQFGALT 145
Score = 40.3 bits (90), Expect = 0.054
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +3
Query: 126 SGAFQSMGLSFPVLKGIT-KRGYKQPTPIQRKTIPIALTGKDVV 254
+GAF +GL + + K YKQP+ IQR+TIP L G+DVV
Sbjct: 21 TGAFGLLGLDRTLCYALEHKLRYKQPSTIQRRTIPAVLQGRDVV 64
>UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4;
Ascomycota|Rep: 2-isopropylmalate synthase - Ajellomyces
capsulatus NAm1
Length = 1466
Score = 78.6 bits (185), Expect = 2e-13
Identities = 39/90 (43%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Frame = +1
Query: 508 NIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
++++ATPGRF+ H+ +D ++I+V DEADR+ E GF ++L EI +P SRQT+L
Sbjct: 428 DVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEILTTIPKSRQTML 487
Query: 685 FSATLPKMLVEFARAGLSDPTLDKIRVDWK 774
FSAT+ + + R GLS P ++ VD K
Sbjct: 488 FSATMTNNVDKLIRVGLSRPV--RLMVDAK 515
Score = 66.1 bits (154), Expect = 1e-09
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLV-PNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG 436
A TGSGKT F++PILE+LL P PT R IL PTRELA+Q +L FT
Sbjct: 349 AVTGSGKTGAFIIPILERLLYRPRKVPTS----RVAILMPTRELAVQCYNVATKLATFTD 404
Query: 437 LTSAAILGGESIEQQFNVM 493
+T ++GG S+ +Q N++
Sbjct: 405 ITFCQLVGGFSLREQENIL 423
Score = 63.7 bits (148), Expect = 5e-09
Identities = 32/77 (41%), Positives = 43/77 (55%)
Frame = +3
Query: 123 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQLVXXXX 302
S+ +FQ+ LS P+L+G+T G+ PTPIQRKTIP+AL GKDVV G K
Sbjct: 303 SAKSFQAFSLSRPILRGLTSVGFTTPTPIQRKTIPVALLGKDVVGGAVTGSGKTGAFIIP 362
Query: 303 XXRNFLFRTTNLHLERI 353
L+R + R+
Sbjct: 363 ILERLLYRPRKVPTSRV 379
>UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A;
n=50; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
35A - Oryza sativa subsp. japonica (Rice)
Length = 627
Score = 78.6 bits (185), Expect = 2e-13
Identities = 36/81 (44%), Positives = 53/81 (65%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+IVVATPGR + + + LDN + + DEADRL +LGF + ++E+ + RQTLLF
Sbjct: 316 HIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLF 375
Query: 688 SATLPKMLVEFARAGLSDPTL 750
SAT+PK + FA++ L P +
Sbjct: 376 SATMPKKIQNFAKSALVKPVI 396
Score = 42.3 bits (95), Expect = 0.013
Identities = 19/52 (36%), Positives = 33/52 (63%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQLV 290
F+ + L P+L+ + ++G QPTPIQ + +P+ L+G+D++ G K LV
Sbjct: 184 FRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLV 235
Score = 39.1 bits (87), Expect = 0.13
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Frame = +2
Query: 257 MARTGSGKTACFVLPIL-----EKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRE 418
+A TGSGKT FVLP++ E++++P PG+ +I+ P+RELA QT + +
Sbjct: 225 IAFTGSGKTLVFVLPLIMVALQEEMMMP---IVPGEGPFGMIICPSRELAKQTYDVIEQ 280
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 78.2 bits (184), Expect = 2e-13
Identities = 39/80 (48%), Positives = 49/80 (61%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
++IVVATPGR L + LK+ + +V DEADRL +LGFGE+L I LP RQ L
Sbjct: 130 ADIVVATPGRLLDLLEHNALKISEVSTLVLDEADRLLDLGFGEELGRILELLPPRRQNLF 189
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSAT P + A + L DP
Sbjct: 190 FSATFPPAIEVLAESMLHDP 209
Score = 54.4 bits (125), Expect = 3e-06
Identities = 36/85 (42%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLL-VPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF-- 430
A+TGSGKTA F LP+L++L P P P R LIL PTRELA Q + K+
Sbjct: 49 AQTGSGKTAAFALPMLQQLANAPTGTPRP---TRGLILVPTRELAAQVGEAIAGFAKYLP 105
Query: 431 TGLTSAAILGGESIE-QQFNVMSGS 502
+ A + GG SI Q N+ G+
Sbjct: 106 QRVKVAVVFGGVSINPQMMNLRGGA 130
Score = 37.5 bits (83), Expect = 0.38
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Frame = +3
Query: 135 FQSMGLS---FPV-LKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F S+G S P L+ I +GY+ PT IQ + IP L G+DVV + G K
Sbjct: 3 FSSLGFSPALLPAFLRAIGDKGYRAPTAIQSQAIPAILLGRDVVGSAQTGSGK 55
>UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2;
Chaetomium globosum|Rep: ATP-dependent RNA helicase DRS1
- Chaetomium globosum (Soil fungus)
Length = 795
Score = 78.2 bits (184), Expect = 2e-13
Identities = 39/88 (44%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Frame = +1
Query: 508 NIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
++V+ATPGRF+ H+ ++ ++I+V DEADR+ E GF ++L EI LP SRQT+L
Sbjct: 399 DVVIATPGRFIDHMRNSASFAVETVEILVLDEADRMLEDGFADELNEILTTLPKSRQTML 458
Query: 685 FSATLPKMLVEFARAGLSDPTLDKIRVD 768
FSAT+ + + R GL+ P +I VD
Sbjct: 459 FSATMTSTVDKLIRVGLNKPA--RIMVD 484
Score = 63.7 bits (148), Expect = 5e-09
Identities = 32/74 (43%), Positives = 41/74 (55%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQLVXXXXXXR 311
+FQ M LS P+L+G+T G+ +PTPIQ KTIPIAL GKDVV G K
Sbjct: 277 SFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSGKTAAFVVPILE 336
Query: 312 NFLFRTTNLHLERI 353
L+R + R+
Sbjct: 337 RLLYRPKKVPTTRV 350
Score = 57.6 bits (133), Expect = 3e-07
Identities = 34/75 (45%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLV-PNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG 436
A TGSGKTA FV+PILE+LL P PT R ++L+PTRELA+Q +L T
Sbjct: 320 AVTGSGKTAAFVVPILERLLYRPKKVPTT----RVVVLTPTRELAIQCHSVATKLASHTD 375
Query: 437 LTSAAILGGESIEQQ 481
+ +GG S++ Q
Sbjct: 376 IKFCLAVGGLSLKVQ 390
>UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX10;
n=14; Eutheria|Rep: Probable ATP-dependent RNA helicase
DDX10 - Mus musculus (Mouse)
Length = 875
Score = 78.2 bits (184), Expect = 2e-13
Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Frame = +1
Query: 508 NIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
NI+V TPGR L H+ +C N++++V DEADR+ ++GF + + I LP RQTLL
Sbjct: 192 NILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLL 251
Query: 685 FSATLPKMLVEFARAGLSDPTLDKI--RVDWKLPSTL 789
FSAT K + + AR L DP + + + P+TL
Sbjct: 252 FSATQTKSVKDLARLSLKDPEYVWVHEKAKYSTPATL 288
Score = 62.1 bits (144), Expect = 2e-08
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TGSGKT F++P+LE L T G L LI+SPTRELA QT +R++GK
Sbjct: 113 AKTGSGKTLAFLVPVLEALYRLQWTSTDG--LGVLIISPTRELAYQTFEVLRKVGKNHDF 170
Query: 440 TSAAILGGESIEQQFNVMSG-----SSPT*LLQHL 529
++ I+GG+ ++ + ++ +P LLQH+
Sbjct: 171 SAGLIIGGKDLKHEAERINNINILVCTPGRLLQHM 205
Score = 38.7 bits (86), Expect = 0.17
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
F LS LKG+ + Y+ T IQ++TI +AL GKDV+ + G K L
Sbjct: 71 FSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTL 121
>UniRef50_Q0HLM7 Cluster: DEAD/DEAH box helicase domain protein;
n=14; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain MR-4)
Length = 451
Score = 77.8 bits (183), Expect = 3e-13
Identities = 36/67 (53%), Positives = 49/67 (73%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFS 690
+VVATPGR L +C + + LD+IK +V DEADRL E+GF +Q++ A + +QTLLFS
Sbjct: 155 LVVATPGRLLDLCTQSHISLDSIKYLVLDEADRLLEMGFWPDVQKLMAMMLKRKQTLLFS 214
Query: 691 ATLPKML 711
ATLP+ L
Sbjct: 215 ATLPEAL 221
Score = 39.1 bits (87), Expect = 0.13
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Frame = +2
Query: 254 SMARTGSGKTACFVLPILEK----------LLVPNNKPTPGKNLRALILSPTRELALQTL 403
++++TGSGKT F LP+L+ L + P+ N +AL+L PTRELA Q
Sbjct: 58 ALSQTGSGKTLAFGLPLLQAIHQQLQQQVGLAGAESVPSLASNAQALVLVPTRELAQQVT 117
Query: 404 RFVRELGK--FTGLTSAAILGGESIEQQ 481
+ L + L + GG + E+Q
Sbjct: 118 TALHALASKLSSSLKIQLLCGGIAQEEQ 145
>UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2;
Salinispora|Rep: DEAD/DEAH box helicase-like -
Salinispora arenicola CNS205
Length = 633
Score = 77.8 bits (183), Expect = 3e-13
Identities = 37/78 (47%), Positives = 52/78 (66%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFS 690
I+V TPGR L + + LKLD ++ +V DEADR+ +LGF + ++ I A LP RQT+LFS
Sbjct: 235 ILVGTPGRLLDLAKQKHLKLDRVRALVLDEADRMLDLGFLDDVERILAILPEDRQTMLFS 294
Query: 691 ATLPKMLVEFARAGLSDP 744
AT+P +V +R L P
Sbjct: 295 ATMPDPIVALSRRFLRRP 312
Score = 48.8 bits (111), Expect = 2e-04
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVP--NNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT 433
A TG+GKT F +P+LE++L P TP +AL++ PTREL +Q + ++ G
Sbjct: 154 APTGTGKTLGFGVPLLEQVLAPAEGGDGTP----QALVVVPTRELGIQVAKDLQAAGSTR 209
Query: 434 GLTSAAILGGESIEQQFNVM 493
G+ I GG + E Q +
Sbjct: 210 GVRVLPIYGGVAYEPQIEAL 229
>UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized protein
- Emericella nidulans (Aspergillus nidulans)
Length = 1676
Score = 77.8 bits (183), Expect = 3e-13
Identities = 38/90 (42%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Frame = +1
Query: 508 NIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
++++ATPGRF+ H+ +D ++I+V DEADR+ E GF ++L EI +P SRQT+L
Sbjct: 913 DVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEILTTIPKSRQTML 972
Query: 685 FSATLPKMLVEFARAGLSDPTLDKIRVDWK 774
FSAT+ + + R GL+ P ++ VD K
Sbjct: 973 FSATMTDSVDKLIRVGLNRPV--RLMVDTK 1000
Score = 66.9 bits (156), Expect = 5e-10
Identities = 38/79 (48%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLV-PNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG 436
A TGSGKTA FV+PILE+LL P PT R IL PTRELA+Q +L +T
Sbjct: 834 AVTGSGKTAAFVVPILERLLFRPRKVPTS----RVAILMPTRELAVQCYNVATKLATYTD 889
Query: 437 LTSAAILGGESIEQQFNVM 493
+T ++GG S+ +Q NV+
Sbjct: 890 ITFCQLVGGFSLREQENVL 908
Score = 57.6 bits (133), Expect = 3e-07
Identities = 28/74 (37%), Positives = 38/74 (51%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQLVXXXXXXR 311
+FQ LS P+L+G+ + PTPIQ+KTIP+AL GKD+V G K
Sbjct: 791 SFQEFNLSRPILRGLAAVNFTNPTPIQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPILE 850
Query: 312 NFLFRTTNLHLERI 353
LFR + R+
Sbjct: 851 RLLFRPRKVPTSRV 864
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 77.4 bits (182), Expect = 4e-13
Identities = 43/98 (43%), Positives = 56/98 (57%), Gaps = 6/98 (6%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG 436
+A+TG+GKTA F LPIL +L + KP P + R L+LSPTRELA Q R+ GK G
Sbjct: 108 IAQTGTGKTAAFALPILHRL-AEDKKPAPRRGFRCLVLSPTRELATQIAESFRDYGKHMG 166
Query: 437 LTSAAILGGESIEQQFNVMSG------SSPT*LLQHLG 532
LT A I GG Q ++ ++P L+ HLG
Sbjct: 167 LTVATIFGGVKYGPQMKALAAGVDVVVATPGRLMDHLG 204
Score = 66.5 bits (155), Expect = 7e-10
Identities = 32/79 (40%), Positives = 50/79 (63%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
++VVATPGR + E L+ ++I V DEAD++ +LGF +++I ++LP RQ L F
Sbjct: 190 DVVVATPGRLMDHLGEKSAHLNGVEIFVLDEADQMLDLGFVVPIRKIASQLPKERQNLFF 249
Query: 688 SATLPKMLVEFARAGLSDP 744
SAT+P + + A L +P
Sbjct: 250 SATMPSEIGKLAGELLKNP 268
Score = 49.6 bits (113), Expect = 9e-05
Identities = 20/49 (40%), Positives = 33/49 (67%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F +GL+ P+LK +T +GY PTPIQ + IP+ ++G+D++ + G K
Sbjct: 67 FTDLGLAKPLLKALTDKGYTVPTPIQAQAIPLVMSGRDLLGIAQTGTGK 115
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 77.4 bits (182), Expect = 4e-13
Identities = 37/84 (44%), Positives = 51/84 (60%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
++VVATPGR L LKL+ +++VV DEAD + ++GF E L+ I + P RQT LF
Sbjct: 159 DVVVATPGRALDHLQRKTLKLEQVRVVVLDEADEMLDMGFAEDLEAILSSTPEKRQTALF 218
Query: 688 SATLPKMLVEFARAGLSDPTLDKI 759
SATLP + A L +P +I
Sbjct: 219 SATLPPRIASIAERHLREPVRVRI 242
Score = 58.8 bits (136), Expect = 1e-07
Identities = 30/79 (37%), Positives = 46/79 (58%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG 436
+A TG+GKTA F LP+L+++ + P AL+L PTRELA+Q + G+ G
Sbjct: 79 IAATGTGKTAAFSLPLLQRITPGAHAPFTAS---ALVLVPTRELAMQVAEAIHRYGQKLG 135
Query: 437 LTSAAILGGESIEQQFNVM 493
++ + GG+ I QQ V+
Sbjct: 136 ISVVPLYGGQVISQQLRVL 154
Score = 46.0 bits (104), Expect = 0.001
Identities = 18/44 (40%), Positives = 31/44 (70%)
Frame = +3
Query: 123 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVV 254
+ F+S+GL P+++ ++ GY++PTPIQR +P L GKD++
Sbjct: 34 ADNTFESLGLLPPLVEALSALGYEEPTPIQRAALPPLLEGKDLL 77
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 77.0 bits (181), Expect = 5e-13
Identities = 37/80 (46%), Positives = 54/80 (67%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
++I+VATPGR L + + L L ++++ V DEAD++ +LGF L+ I LP +RQTL
Sbjct: 130 TDILVATPGRLLDLIDQRALVLKDVEVFVLDEADQMLDLGFIHALRRIDKLLPKNRQTLF 189
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSAT+PK + E + LSDP
Sbjct: 190 FSATMPKTIQELSSQFLSDP 209
Score = 60.5 bits (140), Expect = 5e-08
Identities = 32/81 (39%), Positives = 46/81 (56%)
Frame = +2
Query: 251 CSMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF 430
C +A+TG+GKTA F LP + L N + P + R LILSPTRELA Q R + +
Sbjct: 47 CGIAQTGTGKTAAFALPSIH-YLATNPQARPQRGCRMLILSPTRELASQIARACNDYTRH 105
Query: 431 TGLTSAAILGGESIEQQFNVM 493
++ A+ GG I +Q ++
Sbjct: 106 LRMSVNAVFGGVPIGRQMRML 126
Score = 41.1 bits (92), Expect = 0.031
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = +3
Query: 123 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+S +F+++GL +++ + GY +PTPIQ + IP L GKD+ + G K
Sbjct: 4 TSVSFKTLGLDSSLVQALDGLGYSKPTPIQAQAIPHLLEGKDLCGIAQTGTGK 56
>UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1;
Toxoplasma gondii|Rep: Dead-box helicase, putative -
Toxoplasma gondii
Length = 822
Score = 77.0 bits (181), Expect = 5e-13
Identities = 40/94 (42%), Positives = 57/94 (60%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
++++ T GR + + L L + +V DEADR+FELG+ EQL + A LP+S+Q +L
Sbjct: 147 DVLLTTVGRGSQLIHDKVLSLSAARFLVLDEADRIFELGWKEQLSMLFAALPASKQVVLV 206
Query: 688 SATLPKMLVEFARAGLSDPTLDKIRVDWKLPSTL 789
SATLP LV FAR GL DP ++ + L L
Sbjct: 207 SATLPGDLVNFARLGLRDPEFVRLEKECTLSDDL 240
Score = 65.7 bits (153), Expect = 1e-09
Identities = 39/95 (41%), Positives = 58/95 (61%)
Frame = +2
Query: 248 CCSMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGK 427
C M+RTGSGKTACF+LP+L+ L+ + G +RA++++PTREL Q R +L
Sbjct: 65 CILMSRTGSGKTACFLLPLLD--LLGEHSSVVG--VRAVLIAPTRELVAQIHRVCSKLLH 120
Query: 428 FTGLTSAAILGGESIEQQFNVMSGSSPT*LLQHLG 532
+ L +LGGE+ +QF +S +P LL +G
Sbjct: 121 SSSLRVCCLLGGENYSKQFLALS-RNPDVLLTTVG 154
Score = 48.8 bits (111), Expect = 2e-04
Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +3
Query: 132 AFQSMGLSFPV-LKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
AF+++GLS P L I G+ QPTPIQR+ IP+ L GKD + G K
Sbjct: 25 AFETLGLSTPTSLAAIKGLGFSQPTPIQRRAIPLLLKGKDCILMSRTGSGK 75
>UniRef50_Q4SDX4 Cluster: Chromosome undetermined SCAF14628, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF14628, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 634
Score = 76.2 bits (179), Expect = 9e-13
Identities = 37/81 (45%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +1
Query: 505 SNIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTL 681
+NI++ TPGR L H+ + N+ ++V DEADR+ ++GF E L I LP SRQTL
Sbjct: 52 TNIIICTPGRLLQHMDQTVSFHASNLHVLVLDEADRILDMGFTETLNAIVENLPKSRQTL 111
Query: 682 LFSATLPKMLVEFARAGLSDP 744
LFSAT K + + AR L +P
Sbjct: 112 LFSATQTKSVKDLARLSLKEP 132
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 76.2 bits (179), Expect = 9e-13
Identities = 39/94 (41%), Positives = 56/94 (59%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+IVVATPGR L + + L L +K +V DEADR+ +LGF ++L +I + P + QTLLF
Sbjct: 127 DIVVATPGRLLDLMRKNALDLRGLKALVLDEADRMLDLGFADELDDILDQTPGNVQTLLF 186
Query: 688 SATLPKMLVEFARAGLSDPTLDKIRVDWKLPSTL 789
SAT P + E L +P ++ + LP L
Sbjct: 187 SATFPDKVKELTEELLRNPVEISVKQEATLPDQL 220
Score = 62.5 bits (145), Expect = 1e-08
Identities = 40/82 (48%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNL-RALILSPTRELALQTLRFVRELGKF-- 430
A TGSGKTA FVLP+LEKL ++ P PG NL AL+L PTRELA+Q + V +
Sbjct: 45 AETGSGKTAGFVLPLLEKL---HSIPAPGNNLTHALVLVPTRELAVQVSQSVDRYSENCP 101
Query: 431 TGLTSAAILGGESIEQQFNVMS 496
+ S AI GG +I Q +S
Sbjct: 102 RKIRSVAIYGGAAINPQMQSLS 123
Score = 41.5 bits (93), Expect = 0.024
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+F S+GLS ++ GYK+PT IQ K IP L G D++ E G K
Sbjct: 2 SFVSLGLSDFFTSTLSSLGYKEPTAIQDKAIPAVLKGHDLIAAAETGSGK 51
>UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein;
n=7; Actinomycetales|Rep: DEAD/DEAH box helicase domain
protein - Arthrobacter sp. (strain FB24)
Length = 585
Score = 76.2 bits (179), Expect = 9e-13
Identities = 36/79 (45%), Positives = 52/79 (65%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFS 690
IVV TPGR + + + L L N+KIV+ DEAD + +LGF ++ + A P+ RQTLLFS
Sbjct: 168 IVVGTPGRLIDLYKQKHLSLKNVKIVILDEADEMLDLGFLPDVETLIAGTPAVRQTLLFS 227
Query: 691 ATLPKMLVEFARAGLSDPT 747
AT+P ++ AR ++ PT
Sbjct: 228 ATMPGPVIAMARRYMTQPT 246
Score = 41.9 bits (94), Expect = 0.018
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNK-----PTPGKNLRALILSPTRELALQTLRFVRELG 424
A+TG+GKT F +P L++++ ++ PG +AL++ PTRELA+Q + +
Sbjct: 81 AKTGTGKTLGFGIPALQRVVGRDDPGFDKLAVPGAP-QALVIVPTRELAVQVAKDLENAA 139
Query: 425 KFTGLTSAAILGGESIEQQ 481
+ A I GG + E Q
Sbjct: 140 RKRNARIATIYGGRAYEPQ 158
Score = 35.5 bits (78), Expect = 1.5
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
+F + +++ + G P PIQ T+P+AL G D++ + G K L
Sbjct: 38 SFADYNVRADIVESLADAGITHPFPIQAMTLPVALAGHDIIGQAKTGTGKTL 89
>UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_139_12217_14094 - Giardia lamblia
ATCC 50803
Length = 625
Score = 76.2 bits (179), Expect = 9e-13
Identities = 35/80 (43%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMC-LKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
+I+VATPGR + + LD I+++V DE D++ ++GF ++L+EICA P +RQTLL
Sbjct: 124 DIIVATPGRLIDLVRNTVNFSLDTIEVLVLDEGDKMLDIGFHDELKEICALCPVARQTLL 183
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSAT+ K ++ F+ L P
Sbjct: 184 FSATMEKEVLSFSLLALQKP 203
Score = 58.4 bits (135), Expect = 2e-07
Identities = 33/74 (44%), Positives = 45/74 (60%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A TGSGKT F +P+LE++++ + T G ALILSPTRELA QT ++EL FT
Sbjct: 45 AVTGSGKTGAFGIPLLERMIL-RGRDTYGTT--ALILSPTRELAAQTAAVLQELAYFTNF 101
Query: 440 TSAAILGGESIEQQ 481
++GG +Q
Sbjct: 102 RVYLLIGGTDTAKQ 115
Score = 38.3 bits (85), Expect = 0.22
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVV 254
++Q + LS + + + + G+K PT +Q K IPI L G+D +
Sbjct: 2 SWQGLSLSRQLTRAVLRLGWKFPTTVQEKVIPIVLAGRDAL 42
>UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP4 -
Ustilago maydis (Smut fungus)
Length = 869
Score = 76.2 bits (179), Expect = 9e-13
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Frame = +1
Query: 508 NIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
NI++ATPGR L H+ + N++++V DEADR+ ++GF L I LP +RQT+L
Sbjct: 181 NILIATPGRLLQHMDQTLGFDTSNVQVLVLDEADRILDMGFSRTLNAIVENLPRNRQTML 240
Query: 685 FSATLPKMLVEFARAGLSDPTLDKIR 762
FSAT K + + AR L DP +R
Sbjct: 241 FSATQTKRVKDLARLSLQDPEYVAVR 266
Score = 69.7 bits (163), Expect = 8e-11
Identities = 37/95 (38%), Positives = 60/95 (63%), Gaps = 5/95 (5%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
ARTGSGKT F++P+LE L K P L AL++SPTRELA+Q +R++G +
Sbjct: 102 ARTGSGKTLAFLIPVLEILY--RRKWGPSDGLGALVISPTRELAIQIFEVLRKIGSYHTF 159
Query: 440 TSAAILGGESIEQQFNVMSG-----SSPT*LLQHL 529
++ ++GG+ ++Q+ + +S ++P LLQH+
Sbjct: 160 SAGLVIGGKDVKQEKDRLSRINILIATPGRLLQHM 194
Score = 35.5 bits (78), Expect = 1.5
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
F + LS +G+ + GY T IQ K++ ++L GKDV+ G K L
Sbjct: 60 FTQLPLSDRTCRGLKRAGYTDMTDIQAKSLSLSLKGKDVLGAARTGSGKTL 110
>UniRef50_Q4N0E9 Cluster: ATP-dependent RNA helicase, putative; n=2;
Theileria|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 839
Score = 75.8 bits (178), Expect = 1e-12
Identities = 38/87 (43%), Positives = 55/87 (63%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+IV+ATPGR ++ + L L + +V DEAD+LFE+GF + ++ A LP +Q +L
Sbjct: 136 DIVIATPGRLVYHLEQKSLTLSLLTHLVIDEADKLFEMGFLPDVYKVFAYLPKIKQVILV 195
Query: 688 SATLPKMLVEFARAGLSDPTLDKIRVD 768
SATLP L EF GL++P L K+ D
Sbjct: 196 SATLPTQLSEFVSFGLNEPVLAKLDQD 222
Score = 57.2 bits (132), Expect = 4e-07
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQT----LRFVRELG 424
+ARTGSGKT ++ PI++ L+ + P G +R LIL PTRELALQ +FV
Sbjct: 53 IARTGSGKTVAYIAPIVQ--LLDFHSPVVG--VRCLILLPTRELALQVEGVLKKFVNFSN 108
Query: 425 KFTGLTSAAILGGESIEQQFNVMS 496
+ L + ++GG+S+E QF +S
Sbjct: 109 QDDALRVSLLIGGKSVESQFGSLS 132
Score = 41.1 bits (92), Expect = 0.031
Identities = 21/43 (48%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 129 GAFQSMGLSFPVLKGITKR-GYKQPTPIQRKTIPIALTGKDVV 254
G F ++GL P+ + KR Y QP+ IQRKTIP L G DV+
Sbjct: 9 GPFGTLGLKKPICLTLQKRLRYDQPSAIQRKTIPHILAGSDVL 51
>UniRef50_Q9FLB0 Cluster: DEAD-box ATP-dependent RNA helicase 18;
n=8; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 18 - Arabidopsis thaliana (Mouse-ear cress)
Length = 593
Score = 75.8 bits (178), Expect = 1e-12
Identities = 40/94 (42%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEM-CLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
N+++ TPGR I M L N++I++ DEADRL E+GF Q+ I +RLP R+T L
Sbjct: 144 NVLIGTPGRLSDIMERMEILDFRNLEILILDEADRLLEMGFQRQVNYIISRLPKQRRTGL 203
Query: 685 FSATLPKMLVEFARAGLSDPTLDKIRVDWKLPST 786
FSAT + + E A+AGL +P ++R K S+
Sbjct: 204 FSATQTEGVEELAKAGLRNPVRVEVRAKSKSESS 237
Score = 47.6 bits (108), Expect = 4e-04
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRE-LGKFTG 436
A TGSGKT FV+P++E L + P + +I+SPTREL+ Q + +
Sbjct: 60 AATGSGKTLAFVVPLVEILRRSTSFPPKPHQVMGVIISPTRELSTQIYNVAQPFVSTLAN 119
Query: 437 LTSAAILGGESIEQQFNVM 493
+ S ++GG ++ ++
Sbjct: 120 VNSVLLVGGREVKADMKII 138
>UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=1;
Propionibacterium acnes|Rep: Putative ATP-dependent RNA
helicase - Propionibacterium acnes
Length = 561
Score = 75.4 bits (177), Expect = 2e-12
Identities = 35/79 (44%), Positives = 52/79 (65%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
++VV TPGR L + L L +++IVV DEAD + +LGF ++ + R P+SRQT+LF
Sbjct: 183 DVVVGTPGRLLDLSQRKDLDLSHVRIVVLDEADEMLDLGFLPDVENLIGRTPASRQTMLF 242
Query: 688 SATLPKMLVEFARAGLSDP 744
SAT+P ++ AR+ L P
Sbjct: 243 SATMPAPIMALARSQLHRP 261
Score = 49.2 bits (112), Expect = 1e-04
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNK-----PTPGKNLRALILSPTRELALQTLRFVRELG 424
ARTG+GKT F + IL ++ +P ++ T GK +AL++ PTRELALQ + +
Sbjct: 97 ARTGTGKTLAFGITILLRITLPGDEGWEELTTKGKP-QALVMCPTRELALQVSKDISTAA 155
Query: 425 KFTGLTSAAILGGESIEQQFNVM 493
G + GG E Q + +
Sbjct: 156 SVRGARVLTVYGGVGYESQIDAL 178
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 75.4 bits (177), Expect = 2e-12
Identities = 34/79 (43%), Positives = 55/79 (69%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
++++ATPGR L + + L + +++V DEADR+ ++GF ++ IC +LP+SRQTLLF
Sbjct: 124 DVLIATPGRLLDLFERGKILLSSCEMLVIDEADRMLDMGFIPDIETICTKLPTSRQTLLF 183
Query: 688 SATLPKMLVEFARAGLSDP 744
SAT+P + + A LS+P
Sbjct: 184 SATMPPAIKKLADRFLSNP 202
Score = 52.8 bits (121), Expect = 1e-05
Identities = 29/76 (38%), Positives = 47/76 (61%)
Frame = +2
Query: 254 SMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT 433
++A+TG+GKTA FVLP+++ L + + R+LIL PTRELA Q + GK+
Sbjct: 43 AVAQTGTGKTASFVLPMIDILAHGRCR---ARMPRSLILEPTRELAAQVAENFEKYGKYH 99
Query: 434 GLTSAAILGGESIEQQ 481
L+ + ++GG + +Q
Sbjct: 100 KLSMSLLIGGVPMAEQ 115
Score = 41.1 bits (92), Expect = 0.031
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+F +GLS +L+ + + GY++PTP+Q IP L +D++ + G K
Sbjct: 2 SFADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGK 51
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 75.4 bits (177), Expect = 2e-12
Identities = 37/79 (46%), Positives = 49/79 (62%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
++VVATPGR L L+LD + VV DEAD + ++GF E + I + P RQT+LF
Sbjct: 180 DVVVATPGRALDHMGRGTLRLDGLHTVVLDEADEMLDMGFAEDIDAILEQAPQKRQTVLF 239
Query: 688 SATLPKMLVEFARAGLSDP 744
SATLP + + AR L DP
Sbjct: 240 SATLPPRMDQIARRHLRDP 258
Score = 51.6 bits (118), Expect = 2e-05
Identities = 29/78 (37%), Positives = 41/78 (52%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A TG+GKTA F LP+L +L + T +AL+L PTRELA+Q + G+ G
Sbjct: 101 AATGTGKTAAFALPLLHRL---TDDRTGDHGPQALVLVPTRELAVQVSEAIHRYGRDLGA 157
Query: 440 TSAAILGGESIEQQFNVM 493
+ GG I +Q +
Sbjct: 158 RVLPVYGGAPIGRQVRAL 175
Score = 38.3 bits (85), Expect = 0.22
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F + L +L+ + GY++PTPIQR+ +P + G+D++ G K
Sbjct: 59 FAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGTGK 107
>UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein;
n=22; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain ANA-3)
Length = 491
Score = 75.4 bits (177), Expect = 2e-12
Identities = 32/78 (41%), Positives = 51/78 (65%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+++VATPGR L + + ++ D + ++V DEADR+ ++GF E + I +LP RQ LLF
Sbjct: 125 DLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINSIIEKLPEQRQNLLF 184
Query: 688 SATLPKMLVEFARAGLSD 741
SATL K + A++ + D
Sbjct: 185 SATLSKQVKALAKSAIPD 202
Score = 62.5 bits (145), Expect = 1e-08
Identities = 35/82 (42%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLL-VPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG 436
A+TG+GKTA FVLP+L + P +P K +RA+IL+PTRELALQ + + K+
Sbjct: 45 AQTGTGKTASFVLPLLHRFADAPKIRP---KRVRAIILTPTRELALQVEENINQYAKYLP 101
Query: 437 LTSAAILGG-ESIEQQFNVMSG 499
LT+ A+ GG ++ Q+ ++ G
Sbjct: 102 LTAMAMYGGVDAAPQKKRLIEG 123
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F +GL ++K +T+ GY PTPIQ K IP L GK+V+ + G K
Sbjct: 3 FSQLGLHSALVKAVTELGYTTPTPIQTKAIPSILAGKNVLAAAQTGTGK 51
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 74.9 bits (176), Expect = 2e-12
Identities = 35/92 (38%), Positives = 57/92 (61%)
Frame = +1
Query: 514 VVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFSA 693
+V TPGR + + LKLDN+K V DEAD + ++GF + ++ I R+P RQ LFSA
Sbjct: 135 IVGTPGRVMDHIEKKTLKLDNLKSFVLDEADEMLKMGFIDDIKWIMQRIPEQRQIALFSA 194
Query: 694 TLPKMLVEFARAGLSDPTLDKIRVDWKLPSTL 789
T+P ++ + A+ L+ P + KI+ + +T+
Sbjct: 195 TMPNVIKKIAKQFLNQPKIIKIKTKTETATTI 226
Score = 52.4 bits (120), Expect = 1e-05
Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGK-FTG 436
A+TG+GKTA FVLP+L+K+ + N P + LIL+PTRELA+Q V+ + G
Sbjct: 56 AQTGTGKTAAFVLPLLDKINLNINAP------QLLILAPTRELAIQVSEAVQTYARGMKG 109
Query: 437 LTSAAILGGESIEQQ 481
I GG+S + Q
Sbjct: 110 FHVLPIYGGQSYDIQ 124
Score = 37.9 bits (84), Expect = 0.29
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +3
Query: 123 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
S F+ +GLS +L + GY+ P+PIQ + I L KD++ + G K
Sbjct: 10 SPSKFERLGLSNTILNVLDSIGYETPSPIQEQCITHLLNNKDIIGQAQTGTGK 62
>UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 487
Score = 74.9 bits (176), Expect = 2e-12
Identities = 35/79 (44%), Positives = 53/79 (67%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
++VVATPGR + + + + LD + +V DEADR+ ++GF E ++ I + S RQTLLF
Sbjct: 181 HMVVATPGRLMDLLDKRIITLDVCRYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLF 240
Query: 688 SATLPKMLVEFARAGLSDP 744
SAT+PK + FA++ L P
Sbjct: 241 SATMPKKIQNFAKSALVKP 259
Score = 42.3 bits (95), Expect = 0.013
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQLV 290
F+ M P+L + K+G PTPIQ + +P LTG+D++ G K LV
Sbjct: 49 FKEMKFPRPILAALKKKGITHPTPIQVQGLPAVLTGRDMIGIAFTGSGKTLV 100
Score = 40.7 bits (91), Expect = 0.041
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTP---GKNLRALILSPTRELALQTLRFVRELGK 427
+A TGSGKT F LPI+ + K P + +I+ P+RELA QT + +
Sbjct: 90 IAFTGSGKTLVFTLPII-MFSLEQEKAMPFQRNEGPYGMIVVPSRELARQTFEVITHFSR 148
Query: 428 ------FTGLTSAAILGGESIEQQFNVM 493
F L + +GG SI++Q + M
Sbjct: 149 ALEAHGFPSLRTNLCIGGSSIKEQSDAM 176
>UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DRS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 752
Score = 74.9 bits (176), Expect = 2e-12
Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Frame = +1
Query: 508 NIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
+IV+ATPGRF+ HI +D+++I+V DEADR+ E GF ++L EI LPS+RQ LL
Sbjct: 355 DIVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLPSNRQNLL 414
Query: 685 FSATLPKMLVEFARAGLSDPTLDKIRVD 768
FSAT+ + L P +I +D
Sbjct: 415 FSATMNSKIKSLVSLSLKKPV--RIMID 440
Score = 60.9 bits (141), Expect = 4e-08
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF-TG 436
A TGSGKTA F++PI+E+LL KP + R ++L PTRELA+Q +++ +F +G
Sbjct: 275 AVTGSGKTAAFMIPIIERLLY---KPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSG 331
Query: 437 LTSAAILGGESIEQQ 481
+T +GG ++ QQ
Sbjct: 332 ITFGLAVGGLNLRQQ 346
Score = 57.6 bits (133), Expect = 3e-07
Identities = 28/73 (38%), Positives = 38/73 (52%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQLVXXXXXXRN 314
F S+ LS PVLKG+ GY +P+PIQ TIPIAL GKD++ G K
Sbjct: 233 FNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIER 292
Query: 315 FLFRTTNLHLERI 353
L++ + R+
Sbjct: 293 LLYKPAKIASTRV 305
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 74.5 bits (175), Expect = 3e-12
Identities = 37/87 (42%), Positives = 56/87 (64%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+I+VATPGR L + + +++ V DEAD + ++GF + +Q I ++LP SRQTLLF
Sbjct: 127 DILVATPGRLLDLIETGDINFKALEVFVLDEADTMLDMGFFKDVQSIISKLPKSRQTLLF 186
Query: 688 SATLPKMLVEFARAGLSDPTLDKIRVD 768
SAT+P + A A L+DPT +I +
Sbjct: 187 SATMPAEIEILAEAILTDPTKIQITAE 213
Score = 54.4 bits (125), Expect = 3e-06
Identities = 30/75 (40%), Positives = 44/75 (58%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG 436
+A+TG+GKTA F LPI+ K N K+ R+LIL+PTRELA Q ++ + + G
Sbjct: 45 IAQTGTGKTAAFSLPIINKF-GRNKIDIKAKSTRSLILTPTRELASQIMQNIDDYSDGLG 103
Query: 437 LTSAAILGGESIEQQ 481
L + + GG + Q
Sbjct: 104 LKTKVVYGGVGRQAQ 118
Score = 41.1 bits (92), Expect = 0.031
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F++ L ++ + +GYKQPTPIQ++ IP + G D++ + G K
Sbjct: 4 FKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGK 52
>UniRef50_Q4P9E5 Cluster: ATP-dependent rRNA helicase SPB4; n=2;
Ustilago maydis|Rep: ATP-dependent rRNA helicase SPB4 -
Ustilago maydis (Smut fungus)
Length = 767
Score = 74.5 bits (175), Expect = 3e-12
Identities = 37/90 (41%), Positives = 57/90 (63%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
++I+V TPGR + + +K +++++V DEADRL +LGF E L+ I + LP R+T L
Sbjct: 209 ADILVGTPGRLEELLSKKGVKKSSLEVLVLDEADRLLDLGFTENLRRILSLLPKQRRTGL 268
Query: 685 FSATLPKMLVEFARAGLSDPTLDKIRVDWK 774
FSAT+ L E R GL +P ++V+ K
Sbjct: 269 FSATMTDALSELVRIGLRNPVRVVVKVEAK 298
Score = 42.3 bits (95), Expect = 0.013
Identities = 24/46 (52%), Positives = 29/46 (63%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQ 397
A TGSGKT FV+P+LE +L + ALI+SPTRELA Q
Sbjct: 72 AVTGSGKTLAFVIPVLE-MLARRTTRLKKDEVGALIVSPTRELAEQ 116
Score = 34.7 bits (76), Expect = 2.7
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +3
Query: 162 VLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQLVXXXXXXRNFLFRTTNLH 341
V+ ++ G+ Q TP+Q TIP+ ++ KDVV G K L RTT L
Sbjct: 39 VVSLLSDLGFGQMTPVQASTIPLFVSHKDVVVEAVTGSGKTLAFVIPVLEMLARRTTRLK 98
Query: 342 LERI 353
+ +
Sbjct: 99 KDEV 102
>UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase drs1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 754
Score = 74.5 bits (175), Expect = 3e-12
Identities = 37/80 (46%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Frame = +1
Query: 508 NIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
+IV+ATPGRF+ H+ ++NI+I+V DEADR+ E GF ++L EI P SRQT+L
Sbjct: 382 DIVIATPGRFIDHMRNSQGFTVENIEIMVMDEADRMLEDGFADELNEIIQACPKSRQTML 441
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSAT+ + + R L+ P
Sbjct: 442 FSATMTDKVDDLIRLSLNRP 461
Score = 60.5 bits (140), Expect = 5e-08
Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLV-PNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG 436
A TGSGKTA F++PILE+LL P PT R LIL PTRELA+Q ++ FT
Sbjct: 303 AVTGSGKTAAFIVPILERLLYRPKKVPTT----RVLILCPTRELAMQCHSVATKIASFTD 358
Query: 437 LTSAAILGGESIEQQ 481
+ +GG S++ Q
Sbjct: 359 IMVCLCIGGLSLKLQ 373
Score = 59.7 bits (138), Expect = 8e-08
Identities = 30/74 (40%), Positives = 41/74 (55%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQLVXXXXXXR 311
+FQSM LS P+LKG++ G++ PT IQ KTIP+AL GKD+V G K
Sbjct: 260 SFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILE 319
Query: 312 NFLFRTTNLHLERI 353
L+R + R+
Sbjct: 320 RLLYRPKKVPTTRV 333
>UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;
Sulfurovum sp. NBC37-1|Rep: ATP-independent RNA helicase
DbpA - Sulfurovum sp. (strain NBC37-1)
Length = 453
Score = 74.1 bits (174), Expect = 4e-12
Identities = 35/85 (41%), Positives = 55/85 (64%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
++I++ TPGR + L L++IK +V DEADR+ ++GF E++ +I + +P +QTLL
Sbjct: 123 AHILIGTPGRIQDHLAKGTLTLESIKTLVLDEADRMLDMGFYEEIIKIGSNMPKQKQTLL 182
Query: 685 FSATLPKMLVEFARAGLSDPTLDKI 759
FSAT P + A+A L DP K+
Sbjct: 183 FSATFPPKIESLAKALLKDPLTIKV 207
Score = 40.3 bits (90), Expect = 0.054
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +2
Query: 254 SMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF- 430
+ ++TGSGKT F +P + V +NKP + ++++PTRELA Q +R++ +
Sbjct: 45 AQSKTGSGKTLAFGIPAVMGTDVKSNKP------QTIVITPTRELAEQVAMELRKIAAYK 98
Query: 431 TGLTSAAILGGESIEQQ 481
L + GG + Q
Sbjct: 99 ANLKILTLYGGVPLRAQ 115
>UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=7;
Eukaryota|Rep: ATP-dependent RNA helicase abstrakt -
Drosophila melanogaster (Fruit fly)
Length = 619
Score = 74.1 bits (174), Expect = 4e-12
Identities = 36/79 (45%), Positives = 51/79 (64%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+IVVATPGR + + + L LD + + DEADR+ ++GF E ++ I + RQTLLF
Sbjct: 311 HIVVATPGRLMDMLDKKILTLDMCRYLCMDEADRMIDMGFEEDVRTIFSFFKGQRQTLLF 370
Query: 688 SATLPKMLVEFARAGLSDP 744
SAT+PK + FAR+ L P
Sbjct: 371 SATMPKKIQNFARSALVKP 389
Score = 40.3 bits (90), Expect = 0.054
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQLV 290
+F+ M +L G+ +G K PTPIQ + +P L G+D++ G K LV
Sbjct: 178 SFREMKFPKGILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLV 230
Score = 36.7 bits (81), Expect = 0.67
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKN--LRALILSPTRELALQTLRFVRELGK- 427
+A TGSGKT FVLP++ L +N LI+ P+RELA QT ++ K
Sbjct: 220 IAFTGSGKTLVFVLPVIMFALEQEYSLPFERNEGPYGLIICPSRELAKQTHEIIQHYSKH 279
Query: 428 -----FTGLTSAAILGGESIEQQFNVMS 496
+ S +GG + + +V+S
Sbjct: 280 LQACGMPEIRSCLAMGGLPVSEALDVIS 307
>UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_03001730;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001730 - Ferroplasma acidarmanus fer1
Length = 430
Score = 73.7 bits (173), Expect = 5e-12
Identities = 36/95 (37%), Positives = 59/95 (62%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
S+IV+ TPGR L + + LKLD++K +V DEAD + ++GF + +++I + P RQT+L
Sbjct: 115 SDIVIGTPGRILDLYNQKYLKLDHVKYLVLDEADLMLDMGFIDDIKKIISFTPEGRQTIL 174
Query: 685 FSATLPKMLVEFARAGLSDPTLDKIRVDWKLPSTL 789
SATLP + A +++P D +PS++
Sbjct: 175 LSATLPAEVKTIANHFMNNPEFVDAGGDEAIPSSI 209
Score = 71.3 bits (167), Expect = 3e-11
Identities = 36/81 (44%), Positives = 53/81 (65%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
++TGSGKTA ++LP+L + + GK+++A+I+ PTRELALQT R LGK +G+
Sbjct: 40 SKTGSGKTAAYLLPVLNSV-----EKLKGKSVKAIIILPTRELALQTHRVASRLGKISGI 94
Query: 440 TSAAILGGESIEQQFNVMSGS 502
S + GG SI +Q + GS
Sbjct: 95 KSTIVYGGASIIRQVEELPGS 115
Score = 36.7 bits (81), Expect = 0.67
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +3
Query: 144 MGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
M +S + K + + +PT IQ K IP+ LTGKDV+ + G K
Sbjct: 1 MDISENLKKSLGLMKFTEPTEIQEKAIPVVLTGKDVIIRSKTGSGK 46
>UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase
protein; n=1; Spiroplasma citri|Rep: Putative
atp-dependent rna helicase protein - Spiroplasma citri
Length = 443
Score = 73.7 bits (173), Expect = 5e-12
Identities = 35/80 (43%), Positives = 49/80 (61%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
SNI+V TPGR L+LD IK +V DEAD + ++GF L ++ P+ QTLL
Sbjct: 120 SNIIVGTPGRIADHINRKTLRLDKIKTIVLDEADEMLKMGFKTDLDKVFQNAPNKYQTLL 179
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSAT+PK ++E A ++P
Sbjct: 180 FSATMPKQVLEIANNYQTNP 199
Score = 50.0 bits (114), Expect = 7e-05
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF-TG 436
+ TG+GKT F++PIL+ L +P +A+IL PT ELA Q + VR+ + G
Sbjct: 45 SHTGTGKTVAFIVPILQNLNTHLKQP------QAIILCPTHELASQIIEQVRKFATYLEG 98
Query: 437 LTSAAILGGESIEQQFNVMSGSS 505
+ + I GG I++Q + S+
Sbjct: 99 VNATLICGGSHIQRQIYALRKSN 121
Score = 34.7 bits (76), Expect = 2.7
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQLVXXXXXXRN 314
F ++ L + + I K GY T IQ K IP+AL +D++ G K + +N
Sbjct: 3 FNTLNLYPALQRMIAKMGYTNLTEIQEKAIPVALNSQDIIGKSHTGTGKTVAFIVPILQN 62
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 73.7 bits (173), Expect = 5e-12
Identities = 35/80 (43%), Positives = 54/80 (67%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
++I+VATPGR L + + +KL+ +++ V DEADR+ ++GF L+ I +LP+ RQ+L
Sbjct: 126 AHILVATPGRLLDLMNQGHIKLNQLEVFVLDEADRMLDMGFLPDLKRIITQLPTQRQSLF 185
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSATL + E A + LS P
Sbjct: 186 FSATLAPKITELAHSLLSKP 205
Score = 50.8 bits (116), Expect = 4e-05
Identities = 31/68 (45%), Positives = 39/68 (57%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TG+GKTA LPIL +L + K P L AL+L+PTRELA+Q G+ L
Sbjct: 46 AQTGTGKTAALALPILNQLGKNSRKSIPHHPL-ALVLAPTRELAIQIGDSFDAYGRHLKL 104
Query: 440 TSAAILGG 463
S I GG
Sbjct: 105 RSVLIYGG 112
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/49 (46%), Positives = 30/49 (61%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
FQ + L PV K + + YK PTPIQ +TIP AL G+DV+ + G K
Sbjct: 4 FQELKLIAPVQKALVEENYKIPTPIQAQTIPAALEGRDVLGCAQTGTGK 52
>UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 732
Score = 73.7 bits (173), Expect = 5e-12
Identities = 35/80 (43%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Frame = +1
Query: 508 NIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
NI+V TPGR L H+ + D+++++V DEADR+ ++GF +QL I LP+ RQTLL
Sbjct: 199 NIIVCTPGRLLQHMDENAQMSCDSLQVLVLDEADRMLDMGFSKQLNSIINNLPAERQTLL 258
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSAT + + + R +DP
Sbjct: 259 FSATQTRNVKDLCRVCTNDP 278
Score = 67.7 bits (158), Expect = 3e-10
Identities = 40/95 (42%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TGSGKT V+P+LE L K +P L ALI+SPTRELALQT + +G G
Sbjct: 120 AKTGSGKTLALVIPVLEALW--RAKWSPDYGLGALIISPTRELALQTFSTINAVGAHHGF 177
Query: 440 TSAAILGGESIEQQFNVMSG-----SSPT*LLQHL 529
+ ++GG + + N +SG +P LLQH+
Sbjct: 178 SCGLVIGGSDVAFERNRISGINIIVCTPGRLLQHM 212
Score = 42.7 bits (96), Expect = 0.010
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
F+ LS+ L+G+ Y +PT IQR TI +LTG DVV + G K L
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTL 128
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 73.3 bits (172), Expect = 6e-12
Identities = 34/79 (43%), Positives = 50/79 (63%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
++VV TPGR + + L L ++ +V DEADR+ ++GF E ++EI +R RQ+LLF
Sbjct: 148 HVVVGTPGRIQELARKRALHLGGVRTLVLDEADRMLDMGFEEPIREIASRCDKHRQSLLF 207
Query: 688 SATLPKMLVEFARAGLSDP 744
SAT P ++ AR L DP
Sbjct: 208 SATFPDIIRTLAREILKDP 226
Score = 39.5 bits (88), Expect = 0.095
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 SMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGK-F 430
+ A TGSGKTA F L +L+KL P + +AL+L PTRELA Q + +R+L
Sbjct: 68 AQAPTGSGKTAAFGLGLLQKL-----DPALTR-AQALVLCPTRELADQVGKQLRKLATGI 121
Query: 431 TGLTSAAILGGESIEQQFNVMSGSSP 508
+ + GG + Q + P
Sbjct: 122 PNMKLVVLTGGMPLGPQLASLEAHDP 147
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 73.3 bits (172), Expect = 6e-12
Identities = 34/94 (36%), Positives = 58/94 (61%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+I+VATPGR L + + ++ DN+K++V DEADR+ ++GF ++++ LP +RQ ++F
Sbjct: 148 DILVATPGRLLDLINQKMIRFDNLKVLVLDEADRMLDMGFIRDIKKVIEYLPKNRQNMMF 207
Query: 688 SATLPKMLVEFARAGLSDPTLDKIRVDWKLPSTL 789
SAT + + A L+DP K V + T+
Sbjct: 208 SATFSTPIKKLALGLLNDPVEIKASVQNQAAPTI 241
Score = 61.7 bits (143), Expect = 2e-08
Identities = 35/80 (43%), Positives = 49/80 (61%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TG+GKTA F+LPI+E LL +KP + + +L+L+PTRELA Q + K+ L
Sbjct: 68 AQTGTGKTAAFILPIIE-LLRAEDKPKRYQ-VHSLVLTPTRELAAQVEASAKAYTKYLAL 125
Query: 440 TSAAILGGESIEQQFNVMSG 499
S A+ GG SI Q + G
Sbjct: 126 RSDAVFGGVSIRPQVKRLQG 145
Score = 40.7 bits (91), Expect = 0.041
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F+ + L ++ I + GY PTPIQ TIP L GKD++ + G K
Sbjct: 26 FEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKDIMASAQTGTGK 74
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 73.3 bits (172), Expect = 6e-12
Identities = 34/80 (42%), Positives = 51/80 (63%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
++IVV TPGR L + L LD+++ +V DEADR+ ++GF +++ I + RQTLL
Sbjct: 124 AHIVVGTPGRILKHLNKSSLSLDHVRTLVLDEADRMLDMGFQDEIDAIIDQTNKQRQTLL 183
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSAT PK + A+ + DP
Sbjct: 184 FSATYPKKIATIAKRVMKDP 203
Score = 46.8 bits (106), Expect = 6e-04
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 8/113 (7%)
Frame = +2
Query: 233 IDRERCCSMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFV 412
+D + + A+TG+GKTA F L +L KL++ + + ++ LIL PTREL Q + +
Sbjct: 39 LDGKDLIAQAKTGTGKTAAFGLGVLSKLVLDDYR------IQVLILCPTRELCEQVSKAI 92
Query: 413 RELGKFTGLTSAAILGG--------ESIEQQFNVMSGSSPT*LLQHLGASYTS 547
R+L + LGG +S+ +++ G +P +L+HL S S
Sbjct: 93 RDLARMMPNIKLLSLGGGMPFRPQMKSVAHGAHIVVG-TPGRILKHLNKSSLS 144
Score = 39.1 bits (87), Expect = 0.13
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +3
Query: 123 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
SS F S+ LS ++K + GY++ T IQ ++P L GKD++ + G K
Sbjct: 2 SSKDFASLPLSEDLIKNVASLGYEEMTEIQELSLPAILDGKDLIAQAKTGTGK 54
>UniRef50_Q38DS7 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=5; Trypanosomatidae|Rep: ATP-dependent
DEAD/H RNA helicase, putative - Trypanosoma brucei
Length = 795
Score = 73.3 bits (172), Expect = 6e-12
Identities = 41/101 (40%), Positives = 58/101 (57%), Gaps = 8/101 (7%)
Frame = +1
Query: 490 DVWLFS----NIVVATPGRFLHICIEM----CLKLDNIKIVVFDEADRLFELGFGEQLQE 645
DV +FS N+++ TPGR + + L + ++++ DEADRL E GF +L
Sbjct: 237 DVDMFSRTGGNVLIGTPGRLYELLVSSKHSGLFNLTSFELLILDEADRLLEFGFKAKLDA 296
Query: 646 ICARLPSSRQTLLFSATLPKMLVEFARAGLSDPTLDKIRVD 768
I RLP R+T LFSAT K L E ARAG+ +P +RV+
Sbjct: 297 ILKRLPKQRRTGLFSATQTKELAELARAGMRNPVSVAVRVN 337
>UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 727
Score = 73.3 bits (172), Expect = 6e-12
Identities = 38/80 (47%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = +1
Query: 508 NIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
NI++ TPGR L H+ N+KI+V DEADR +LGF + I LPS RQTLL
Sbjct: 185 NIIICTPGRLLQHMDQNPLFDCTNLKILVLDEADRCLDLGFESAMNAIIENLPSERQTLL 244
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSAT K + + AR L +P
Sbjct: 245 FSATQTKSVKDLARLNLRNP 264
Score = 67.7 bits (158), Expect = 3e-10
Identities = 40/96 (41%), Positives = 59/96 (61%), Gaps = 6/96 (6%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TGSGKT F++P+ EKL N+ T L ALI++PTRELALQ V ++GK
Sbjct: 106 AKTGSGKTLAFLIPVFEKLYT--NQWTKLDGLGALIITPTRELALQIFETVAKIGKLHDF 163
Query: 440 TSAAILGGESIE------QQFNVMSGSSPT*LLQHL 529
T+ I+GG++++ Q N++ +P LLQH+
Sbjct: 164 TTGLIIGGQNLKAEKNRLHQLNIII-CTPGRLLQHM 198
Score = 37.1 bits (82), Expect = 0.51
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +3
Query: 126 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
+ +F LS L G+ + Y +PT IQR++I AL GKD++ + G K L
Sbjct: 61 TSSFSDFPLSKKTLGGLKQGQYHKPTAIQRESILPALQGKDILAAAKTGSGKTL 114
>UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 640
Score = 73.3 bits (172), Expect = 6e-12
Identities = 32/74 (43%), Positives = 46/74 (62%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
SN+++ATPGRF+ + + + +V DEADR+F+LGF Q+ I R+ RQTL+
Sbjct: 224 SNVIIATPGRFIDLLSSSAFNIKKVSYLVIDEADRMFDLGFEPQVIRIAERMRKDRQTLM 283
Query: 685 FSATLPKMLVEFAR 726
FSAT P + AR
Sbjct: 284 FSATFPHTVERIAR 297
Score = 55.2 bits (127), Expect = 2e-06
Identities = 33/82 (40%), Positives = 43/82 (52%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A TGSGKT F++P L +L PT A+ILSPTRELA QT +++
Sbjct: 145 AVTGSGKTLAFIIPCLLHVLA--QPPTGQYEAAAVILSPTRELAYQTHIECQKIFSLMDK 202
Query: 440 TSAAILGGESIEQQFNVMSGSS 505
SA ++GG IE Q + S
Sbjct: 203 KSACLVGGNDIENQLRAIKNGS 224
Score = 41.5 bits (93), Expect = 0.024
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 147 GLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
GL P++ + RG+KQPT IQ + IP L+G+D++ G K L
Sbjct: 107 GLPAPLMSHLRLRGFKQPTSIQCQAIPCILSGRDIIGCAVTGSGKTL 153
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 73.3 bits (172), Expect = 6e-12
Identities = 33/85 (38%), Positives = 52/85 (61%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
NI+V TPGR L ++L+N+ VV DEAD + +GF + ++ I + +PS QTLLF
Sbjct: 123 NIIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSEHQTLLF 182
Query: 688 SATLPKMLVEFARAGLSDPTLDKIR 762
SAT+P + A +++P K++
Sbjct: 183 SATMPAPIKRIAERFMTEPEHVKVK 207
Score = 53.6 bits (123), Expect = 5e-06
Identities = 28/78 (35%), Positives = 49/78 (62%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TG+GKTA F +P++EK+ N +P N++A++++PTRELA+Q + ++G+
Sbjct: 47 AQTGTGKTAAFGIPLVEKI----NPESP--NIQAIVIAPTRELAIQVSEELYKIGQDKRA 100
Query: 440 TSAAILGGESIEQQFNVM 493
I GG+ I +Q +
Sbjct: 101 KVLPIYGGQDIGRQIRAL 118
Score = 46.8 bits (106), Expect = 6e-04
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
FQ LS ++K I + G+++ TPIQ +TIP+ L+ KDV+ + G K
Sbjct: 5 FQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGK 53
>UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Saccharophagus degradans (strain 2-40 / ATCC
43961 / DSM 17024)
Length = 436
Score = 72.9 bits (171), Expect = 8e-12
Identities = 37/74 (50%), Positives = 49/74 (66%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TGSGKTA F+LP+L K L N P P + RALIL PTRELALQT++ + +T +
Sbjct: 45 AKTGSGKTAAFLLPMLHKFL---NDPRPNTSTRALILLPTRELALQTVKAFEQFAGYTQI 101
Query: 440 TSAAILGGESIEQQ 481
I+GGE+ + Q
Sbjct: 102 KVGLIMGGEAYKHQ 115
Score = 54.0 bits (124), Expect = 4e-06
Identities = 31/86 (36%), Positives = 47/86 (54%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFS 690
++VATPGR + + +++ +V DE+DR+ ++GF E + I A RQ LLFS
Sbjct: 125 VLVATPGRLVEHIKNGNVDFSDLEFLVLDESDRMLDMGFQENMLAIAAVCNEERQNLLFS 184
Query: 691 ATLPKMLVEFARAGLSDPTLDKIRVD 768
ATL + L DP +I+VD
Sbjct: 185 ATLKHKGIGGITGLLQDPV--RIQVD 208
Score = 37.5 bits (83), Expect = 0.38
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQLVXXXXXXRN 314
F +GL + K + K + +PT +Q +TIP L GKD++ + G K
Sbjct: 3 FSELGLHQSLQKALDKLTFTKPTDVQVQTIPAVLAGKDIMVSAKTGSGKTAAFLLPMLHK 62
Query: 315 FL 320
FL
Sbjct: 63 FL 64
>UniRef50_Q013Q9 Cluster: DEAD/DEAH box helicase, putative; n=7;
cellular organisms|Rep: DEAD/DEAH box helicase, putative
- Ostreococcus tauri
Length = 1423
Score = 72.9 bits (171), Expect = 8e-12
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Frame = +1
Query: 508 NIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
NI+V TPGR L H+ ++++V DEADR+ +LGF + L I LP RQTLL
Sbjct: 825 NILVCTPGRLLQHMDETPLFDCVGLQMLVLDEADRMLDLGFAKTLNAIIENLPKKRQTLL 884
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSAT K + + AR GL DP
Sbjct: 885 FSATQTKSVKDLARLGLKDP 904
Score = 51.2 bits (117), Expect = 3e-05
Identities = 28/94 (29%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Frame = +2
Query: 263 RTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLT 442
+TGSGKT +V+P++E L+ K + +++SPTRELA+Q + + +G ++
Sbjct: 747 KTGSGKTLAYVIPLVE--LLWRKKWGRQDGVGGIVISPTRELAIQIFQCLTRVGARHSMS 804
Query: 443 SAAILGGESIEQQFNVMSG-----SSPT*LLQHL 529
+ ++GG+ + ++ N ++ +P LLQH+
Sbjct: 805 AGLLIGGKDVSEEANRVNKMNILVCTPGRLLQHM 838
Score = 34.7 bits (76), Expect = 2.7
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
F + LS + + +K+ T IQR T+P AL G+DV+ P+ G K L
Sbjct: 704 FIHLPLSSSTKSALKECKFKEMTAIQRATLPHALCGRDVLGPPKTGSGKTL 754
>UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog;
n=39; Gammaproteobacteria|Rep: ATP-dependent RNA
helicase srmB homolog - Haemophilus influenzae
Length = 439
Score = 72.9 bits (171), Expect = 8e-12
Identities = 36/80 (45%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
++VVATPGR L E ++++++FDEADR+ ++GFG+ ++I A +QTLLF
Sbjct: 128 DLVVATPGRLLQYIKEENFDCRSVEMLIFDEADRMLQMGFGQDAEKIAAETRWRKQTLLF 187
Query: 688 SATLP-KMLVEFARAGLSDP 744
SATL ++LV+FA L+DP
Sbjct: 188 SATLEGELLVDFAERLLNDP 207
Score = 64.9 bits (151), Expect = 2e-09
Identities = 37/80 (46%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLL-VPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG 436
A TG+GKTA F+LP L+ LL P KP P R L+L+PTRELA+Q EL +FT
Sbjct: 48 APTGTGKTAAFLLPALQHLLDYPRRKPGPP---RILVLTPTRELAMQVAEQAEELAQFTH 104
Query: 437 LTSAAILGGESIEQQFNVMS 496
L A I GG + + +V +
Sbjct: 105 LNIATITGGVAYQNHGDVFN 124
Score = 38.7 bits (86), Expect = 0.17
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVV 254
F+ LS +LK + K+GY +PT IQ + IP A+ DV+
Sbjct: 6 FEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEESDVL 45
>UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;
n=2; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 35 - Arabidopsis thaliana (Mouse-ear cress)
Length = 591
Score = 72.9 bits (171), Expect = 8e-12
Identities = 36/79 (45%), Positives = 50/79 (63%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+IVVATPGR + + + LD + + DEADRL +LGF + ++E+ S RQTLLF
Sbjct: 280 HIVVATPGRLKDMLAKKKMSLDACRYLTLDEADRLVDLGFEDDIREVFDHFKSQRQTLLF 339
Query: 688 SATLPKMLVEFARAGLSDP 744
SAT+P + FAR+ L P
Sbjct: 340 SATMPTKIQIFARSALVKP 358
Score = 41.1 bits (92), Expect = 0.031
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQLV 290
F+ M PVL + ++G QPTPIQ + +P+ L G+D++ G K LV
Sbjct: 148 FKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLV 199
Score = 38.3 bits (85), Expect = 0.22
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 11/90 (12%)
Frame = +2
Query: 257 MARTGSGKTACFVLPIL-----EKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVREL 421
+A TGSGKT FVLP++ E++++P G+ LI+ P+RELA QT V +
Sbjct: 189 IAFTGSGKTLVFVLPMIMIALQEEMMMP---IAAGEGPIGLIVCPSRELARQTYEVVEQF 245
Query: 422 ------GKFTGLTSAAILGGESIEQQFNVM 493
+ L S +GG + Q V+
Sbjct: 246 VAPLVEAGYPPLRSLLCIGGIDMRSQLEVV 275
>UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10;
Rickettsia|Rep: ATP-dependent RNA helicase RhlE -
Rickettsia conorii
Length = 414
Score = 72.5 bits (170), Expect = 1e-11
Identities = 33/78 (42%), Positives = 50/78 (64%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFS 690
+++ TPGR + LK+D I I V DE DR+ ++G EQL+EI LP RQ L+FS
Sbjct: 122 VIIGTPGRIIDHLNRGSLKIDRIGITVLDEMDRMLDMGMKEQLEEINKFLPEKRQVLMFS 181
Query: 691 ATLPKMLVEFARAGLSDP 744
AT+PK ++ ++ L++P
Sbjct: 182 ATMPKHIIAVSQKYLNNP 199
Score = 49.6 bits (113), Expect = 9e-05
Identities = 29/75 (38%), Positives = 45/75 (60%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
++TGSGKT ++LP+++ + NK T ALIL PTRELA Q + ++ +
Sbjct: 47 SQTGSGKTLAYLLPLIDSFI--KNKTT------ALILVPTRELATQIHSTLNKVTTSYKI 98
Query: 440 TSAAILGGESIEQQF 484
SA ++GGE + +QF
Sbjct: 99 NSAVLIGGEPMPKQF 113
Score = 33.9 bits (74), Expect = 4.7
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +3
Query: 138 QSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQLVXXXXXXRNF 317
++ LS ++ + +PT IQ+++IP+A+ G D++ + G K L +F
Sbjct: 6 KNFNLSEELIIALETMNITEPTEIQKQSIPVAMAGSDILASSQTGSGKTLAYLLPLIDSF 65
Query: 318 LFRTT 332
+ T
Sbjct: 66 IKNKT 70
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 72.5 bits (170), Expect = 1e-11
Identities = 37/83 (44%), Positives = 50/83 (60%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFS 690
I VATPGRF+ + L I VV DEADR+ ++GF Q++EI LP QTLLFS
Sbjct: 245 IAVATPGRFIDHLQQGNTSLSRISYVVLDEADRMLDMGFEPQIREIMRSLPEKHQTLLFS 304
Query: 691 ATLPKMLVEFARAGLSDPTLDKI 759
AT+P + A+ L++P K+
Sbjct: 305 ATMPVEIEALAKEYLANPVQVKV 327
Score = 52.0 bits (119), Expect = 2e-05
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGK-FTG 436
A TGSGKTA F +P+L+ LV G AL+L+PTRELA Q + V+ +
Sbjct: 162 AETGSGKTAAFTIPMLQHCLV-QPPIRRGDGPLALVLAPTRELAQQIEKEVQAFSRSLES 220
Query: 437 LTSAAILGGESIEQQ 481
L + ++GG +IE+Q
Sbjct: 221 LKNCIVVGGTNIEKQ 235
Score = 37.5 bits (83), Expect = 0.38
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+F M L ++K I Y +P+ IQ + +PIAL+G+D++ E G K
Sbjct: 119 SFNDMCLHPSIMKDIAYHEYTRPSSIQAQAMPIALSGRDLLGCAETGSGK 168
>UniRef50_Q9FVV4 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 55; n=2; Arabidopsis thaliana|Rep: Putative
DEAD-box ATP-dependent RNA helicase 55 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 465
Score = 72.5 bits (170), Expect = 1e-11
Identities = 38/91 (41%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEM-CLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTL 681
+N+++ TPGR + M L N++I++ DEADRL ++GF +Q+ I +RLP R+T
Sbjct: 136 ANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTG 195
Query: 682 LFSATLPKMLVEFARAGLSDPTLDKIRVDWK 774
LFSAT + + + A+AGL +P L K D K
Sbjct: 196 LFSATQTQAVADLAKAGLRNPYL-KCEADQK 225
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVR 415
A TGSGKT F+LP +E + N+ P + +I+SPTREL+ Q + R
Sbjct: 61 AATGSGKTLAFLLPFIEIIRRSNSYPPKPHQVMGVIISPTRELSAQIHKVAR 112
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;
n=7; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 72.5 bits (170), Expect = 1e-11
Identities = 37/78 (47%), Positives = 50/78 (64%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFS 690
IVVATPGR + + L + +V DEADR+F+LGF Q++ I ++ RQTLLFS
Sbjct: 354 IVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFS 413
Query: 691 ATLPKMLVEFARAGLSDP 744
AT+P + + AR LSDP
Sbjct: 414 ATMPWKVEKLAREILSDP 431
Score = 51.2 bits (117), Expect = 3e-05
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLL-VPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT 433
+A+TGSGKTA FVLP++ ++ P + G +I +PTRELA Q ++ K
Sbjct: 271 IAKTGSGKTAAFVLPMIVHIMDQPELQRDEGPI--GVICAPTRELAHQIFLEAKKFSKAY 328
Query: 434 GLTSAAILGGESIEQQF 484
GL +A+ GG S +QF
Sbjct: 329 GLRVSAVYGGMSKHEQF 345
Score = 42.7 bits (96), Expect = 0.010
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F+ G S ++ I K+ Y++PT IQ + +PI L+G+DV+ + G K
Sbjct: 230 FEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGK 278
>UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 782
Score = 72.1 bits (169), Expect = 1e-11
Identities = 37/80 (46%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = +1
Query: 508 NIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
NI++ TPGR L H+ N+KI+V DEADR ++GF + + I LP RQTLL
Sbjct: 164 NIIICTPGRLLQHMDENPLFDCVNMKILVLDEADRCLDMGFEKTMNSIIENLPLERQTLL 223
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSAT K + + AR L DP
Sbjct: 224 FSATQTKTVKDLARLSLKDP 243
Score = 58.0 bits (134), Expect = 3e-07
Identities = 35/96 (36%), Positives = 57/96 (59%), Gaps = 6/96 (6%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TGSGKT F++P++E L G L ALI++PTRELA Q +R++G++ +
Sbjct: 85 AKTGSGKTLAFLIPVMEILYCKQWTRLDG--LGALIITPTRELAYQIYETLRKVGRYHDI 142
Query: 440 TSAAILGGESIE------QQFNVMSGSSPT*LLQHL 529
++ I+GG+ + Q N++ +P LLQH+
Sbjct: 143 SAGLIIGGKDLHFEKKRLDQCNIII-CTPGRLLQHM 177
Score = 35.1 bits (77), Expect = 2.0
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
F + LS LKG+ Y T IQR++I +AL G D++ + G K L
Sbjct: 43 FTDLPLSMQTLKGLKDSEYIDLTDIQRQSIGLALKGNDILGAAKTGSGKTL 93
>UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 393
Score = 72.1 bits (169), Expect = 1e-11
Identities = 42/79 (53%), Positives = 50/79 (63%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
++TGSGKTA FVLP+L+KL P PG RALIL PTRELA QT R+LG+ L
Sbjct: 64 SQTGSGKTAAFVLPMLQKLTEAG--PAPGP--RALILEPTRELAAQTAAVCRQLGRRLSL 119
Query: 440 TSAAILGGESIEQQFNVMS 496
+ I GG S EQQ +S
Sbjct: 120 KTRVICGGTSREQQVQSVS 138
Score = 52.0 bits (119), Expect = 2e-05
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS-RQTLL 684
+I+VAT GR L + ++ L L+++ +V DEADRL + F + + P QT+
Sbjct: 142 DIIVATHGRLLDLVMQADLVLEHLTYLVLDEADRLLDEDFSASMTALTPYFPDQPPQTVF 201
Query: 685 FSATLPKMLVEFARAGLSDPTLDKIRVDWKLPSTL 789
SATLP+ +++ A+ +P +I + P +
Sbjct: 202 CSATLPEPVMDLAKRVTRNPVRVEIAAESFTPKNI 236
Score = 40.7 bits (91), Expect = 0.041
Identities = 19/49 (38%), Positives = 30/49 (61%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F+ +GL P+L + + G+K+P+ IQ + IP L GKDV+ + G K
Sbjct: 22 FEELGLIAPLLATLAQAGHKRPSLIQTQAIPPLLEGKDVLVGSQTGSGK 70
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 72.1 bits (169), Expect = 1e-11
Identities = 36/89 (40%), Positives = 56/89 (62%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+++VATPGR L ++LD ++ VV DEAD++ +LGF +++I A+LP RQ ++F
Sbjct: 182 DLLVATPGRLLDHVAAGVIRLDAVETVVLDEADQMLDLGFIPAIRQIMAKLPRQRQAVMF 241
Query: 688 SATLPKMLVEFARAGLSDPTLDKIRVDWK 774
SAT+PK + A L DP + V+ K
Sbjct: 242 SATMPKPIRALAGEFLRDPREVAVSVESK 270
Score = 68.9 bits (161), Expect = 1e-10
Identities = 43/99 (43%), Positives = 58/99 (58%), Gaps = 6/99 (6%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG 436
+A+TG+GKTA FVLPIL ++ +P P + RAL+L+PTRELA Q R GKFT
Sbjct: 100 IAQTGTGKTAAFVLPILHRIAANRARPAP-RACRALVLAPTRELATQIADAARTYGKFTR 158
Query: 437 LTSAAILGGESIEQQFNVM-SG-----SSPT*LLQHLGA 535
+ A ++GG Q M SG ++P LL H+ A
Sbjct: 159 PSVAVVIGGAKPGPQARRMESGVDLLVATPGRLLDHVAA 197
Score = 48.0 bits (109), Expect = 3e-04
Identities = 20/49 (40%), Positives = 34/49 (69%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F ++GL+ P+L+ I+++ Y+ PTPIQ ++IP+ L G D+V + G K
Sbjct: 59 FTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQTGTGK 107
>UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=2;
Polaribacter|Rep: Putative ATP-dependent RNA helicase -
Polaribacter dokdonensis MED152
Length = 411
Score = 72.1 bits (169), Expect = 1e-11
Identities = 33/88 (37%), Positives = 54/88 (61%)
Frame = +2
Query: 233 IDRERCCSMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFV 412
+D++ A+TG+GKTA F LPI+ L + K ++AL+++PTRELA+Q L
Sbjct: 36 LDKKNVIVAAQTGTGKTAAFALPIINLLFDKQDAEKGEKKIKALVITPTRELAIQILENF 95
Query: 413 RELGKFTGLTSAAILGGESIEQQFNVMS 496
+ K++ L S A+ GG S+E Q +++
Sbjct: 96 KSYSKYSNLRSTAVFGGVSLEPQKEILA 123
Score = 62.9 bits (146), Expect = 9e-09
Identities = 29/80 (36%), Positives = 53/80 (66%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+I+VATPGR + + ++ + L ++I V DEAD + ++GF +++I P +QTLLF
Sbjct: 127 DILVATPGRLIDLQMQGNIDLSQLEIFVLDEADLMLDMGFINDIKKIEKLCPRKKQTLLF 186
Query: 688 SATLPKMLVEFARAGLSDPT 747
SAT+P+ + E +++ + + T
Sbjct: 187 SATIPEKIDELSKSIVKNAT 206
Score = 33.9 bits (74), Expect = 4.7
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F + L+ + K I + + +PT +Q KTIP+ L K+V+ + G K
Sbjct: 3 FSDIPLNKSIQKAIAEARFHKPTLVQEKTIPLVLDKKNVIVAAQTGTGK 51
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/95 (36%), Positives = 61/95 (64%), Gaps = 1/95 (1%)
Frame = +1
Query: 508 NIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
++V+ATPGR + H+ + LD+++I++ DEADRL ++GF +++ +I P++RQT+L
Sbjct: 313 DVVIATPGRLIDHLLNAHGIGLDDLEILILDEADRLLDMGFKDEINKIVESCPTNRQTML 372
Query: 685 FSATLPKMLVEFARAGLSDPTLDKIRVDWKLPSTL 789
FSATL + A+ L P ++ ++ STL
Sbjct: 373 FSATLNDEVKTLAKLSLQQPIRVQVDALMQVTSTL 407
Score = 66.1 bits (154), Expect = 1e-09
Identities = 36/74 (48%), Positives = 50/74 (67%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A TGSGKTA F+LP+LE+LL +++ + +R LIL PTRELALQ + L +F+ +
Sbjct: 234 ASTGSGKTAAFLLPVLERLLFRDSEY---RAIRVLILLPTRELALQCQSVMENLAQFSNI 290
Query: 440 TSAAILGGESIEQQ 481
TS I+GG S + Q
Sbjct: 291 TSCLIVGGLSNKAQ 304
Score = 58.4 bits (135), Expect = 2e-07
Identities = 28/73 (38%), Positives = 38/73 (52%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQLVXXXXXXRN 314
F+ + LS P+LK + K G+ QPTPIQ K IP+AL GKD++ G K
Sbjct: 192 FEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLLPVLER 251
Query: 315 FLFRTTNLHLERI 353
LFR + R+
Sbjct: 252 LLFRDSEYRAIRV 264
>UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1238
Score = 72.1 bits (169), Expect = 1e-11
Identities = 36/74 (48%), Positives = 47/74 (63%)
Frame = +1
Query: 502 FSNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTL 681
F NI+VATPGR L E L N+ +V DEADRL ELGF + ++EI ++ RQT+
Sbjct: 223 FPNILVATPGRLLDFLREGATTLANVSYLVIDEADRLLELGFEDTIREIVQQIRFDRQTV 282
Query: 682 LFSATLPKMLVEFA 723
FSAT PK + + A
Sbjct: 283 FFSATWPKAVKDLA 296
Score = 37.1 bits (82), Expect = 0.51
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
++ S G P+L+ I + +K PT IQ PI L G DV+ + G K +
Sbjct: 95 SWASAGFPIPILESIEQLQFKSPTIIQSVVFPIILAGYDVIGIAQTGSGKTI 146
Score = 35.9 bits (79), Expect = 1.2
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLL------VPNNKPTPGKNLRALILSPTRELALQTLRFVRE 418
+A+TGSGKT ++LP L ++ + N K G + LIL PTRELA+Q ++
Sbjct: 137 IAQTGSGKTIAYLLPGLIQITSQKTEELNNTKKQNGPQM--LILVPTRELAMQIESEIQL 194
Query: 419 LGKFTGLTSAAILGG 463
+ L + I GG
Sbjct: 195 FTQNYRLKTLCIYGG 209
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 72.1 bits (169), Expect = 1e-11
Identities = 32/85 (37%), Positives = 54/85 (63%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+++V TPGR + L+L+++ VV DEAD + +GF E ++ I + +P+ RQTLLF
Sbjct: 122 HVIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPAERQTLLF 181
Query: 688 SATLPKMLVEFARAGLSDPTLDKIR 762
SAT+P + A +++P L K++
Sbjct: 182 SATMPDPIRRIAERFMNEPELVKVK 206
Score = 57.6 bits (133), Expect = 3e-07
Identities = 31/88 (35%), Positives = 52/88 (59%)
Frame = +2
Query: 230 SIDRERCCSMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRF 409
S+ + A+TG+GKTA F +PI+EK+ V N+ ++AL+++PTRELA+Q
Sbjct: 36 SLQNKDVIGQAQTGTGKTAAFGIPIVEKVNVKNSA------VQALVVAPTRELAIQVSEE 89
Query: 410 VRELGKFTGLTSAAILGGESIEQQFNVM 493
+ ++G + I GG+ IE+Q +
Sbjct: 90 LYKIGAVKRVRVLPIYGGQDIERQIRAL 117
Score = 51.6 bits (118), Expect = 2e-05
Identities = 23/49 (46%), Positives = 33/49 (67%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
FQ +GLS V+K I + G+++ TPIQ KTIP++L KDV+ + G K
Sbjct: 4 FQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGK 52
>UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG5800-PA - Tribolium castaneum
Length = 770
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Frame = +1
Query: 508 NIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
NIV+ TPGR L H+ N++I+V DEADR ++GF + + I A LP+ RQTLL
Sbjct: 174 NIVIGTPGRILQHMDENPLFDCVNMEILVLDEADRCLDMGFEQTMNAIVANLPAKRQTLL 233
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSAT K + + AR L +P
Sbjct: 234 FSATQTKSVRDLARLSLKNP 253
Score = 59.3 bits (137), Expect = 1e-07
Identities = 36/96 (37%), Positives = 57/96 (59%), Gaps = 6/96 (6%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TGSGKT F++PILE+L G L AL+++PTRELA Q +R +G+
Sbjct: 95 AQTGSGKTLAFLIPILERLYCKQWTRLDG--LGALVITPTRELAYQIFEELRRVGEHHEF 152
Query: 440 TSAAILGGESIE------QQFNVMSGSSPT*LLQHL 529
++ I+GG+ ++ Q N++ G +P +LQH+
Sbjct: 153 SAGLIIGGKDLKFERNRMDQCNIVIG-TPGRILQHM 187
Score = 48.0 bits (109), Expect = 3e-04
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
+F + LS LKG+ + GY +PT IQR+TI + LTGKD++ + G K L
Sbjct: 52 SFDDLPLSPKTLKGLKECGYTKPTDIQRETIKLGLTGKDILGAAQTGSGKTL 103
>UniRef50_UPI0000499530 Cluster: DEAD/DEAH box helicase; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 474
Score = 71.7 bits (168), Expect = 2e-11
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLD--NIKIVVFDEADRLFELGFGEQLQEICARLPSSRQT 678
+NIVV T GR + + +L+ N+++++ DE DR+ E+GF + + I LP R+T
Sbjct: 104 ANIVVGTAGRIEEVIVNKLFELEWNNVEVLILDEGDRMIEMGFSQSMTRIICHLPKQRRT 163
Query: 679 LLFSATLPKMLVEFARAGLSDP 744
LFSAT+PK L +F AG +P
Sbjct: 164 GLFSATMPKELNKFVIAGCRNP 185
>UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: Probable ATP-dependent RNA
helicase - Oceanobacter sp. RED65
Length = 449
Score = 71.7 bits (168), Expect = 2e-11
Identities = 39/74 (52%), Positives = 47/74 (63%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
ARTGSGKTA FV+P+L+ LL P RALIL PTRELA Q L+ + L KFTG+
Sbjct: 44 ARTGSGKTAAFVVPMLQHLLTHK---APNSGTRALILVPTRELAKQLLKQCQALAKFTGI 100
Query: 440 TSAAILGGESIEQQ 481
S I GG+ + Q
Sbjct: 101 QSGMITGGQEFKFQ 114
Score = 46.0 bits (104), Expect = 0.001
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARL--PSSRQTLL 684
I++ATPGR + + +++++ + DEADR+ ++GF E + I + QTLL
Sbjct: 124 IIIATPGRLIDHLKQKKDLMEDVEYFILDEADRMLDMGFEEDVLTIANACSGKAKPQTLL 183
Query: 685 FSATL 699
FSATL
Sbjct: 184 FSATL 188
Score = 37.5 bits (83), Expect = 0.38
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
FQS L +LKGI G+ + T +Q++TIP AL +D++ G K
Sbjct: 2 FQSFSLDQRILKGIEALGFTKATDVQQQTIPEALKQQDLMVCARTGSGK 50
>UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein;
n=31; Actinobacteria (class)|Rep: DEAD/DEAH box helicase
domain protein - Mycobacterium sp. (strain KMS)
Length = 507
Score = 71.7 bits (168), Expect = 2e-11
Identities = 31/81 (38%), Positives = 52/81 (64%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
+++VV TPGR L + + L+L + ++V DEAD + +LGF ++ I + P +RQ +L
Sbjct: 139 ADVVVGTPGRLLDLAQQGHLQLGGLSVLVLDEADEMLDLGFLPDIERILRQTPDTRQAML 198
Query: 685 FSATLPKMLVEFARAGLSDPT 747
FSAT+P ++ AR ++ PT
Sbjct: 199 FSATMPDPIITLARTFMNQPT 219
Score = 43.2 bits (97), Expect = 0.008
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF--- 430
ARTG GKT F +P+L+++ K G RALI+ PTREL LQ + K+
Sbjct: 54 ARTGMGKTYAFGVPLLQRVTTDTEKELSGIP-RALIVVPTRELCLQVHSDLSLAAKYLTA 112
Query: 431 --TGLTSAAILGGESIEQQ 481
L+ +I GG E Q
Sbjct: 113 GDRKLSVVSIYGGRPYEPQ 131
Score = 35.9 bits (79), Expect = 1.2
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F S+G+ + + + + G QP IQ T+P+AL G D++ G K
Sbjct: 12 FASLGVRDEICRALAEEGIHQPFAIQELTLPMALAGDDLIGQARTGMGK 60
>UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 643
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Frame = +1
Query: 505 SNIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTL 681
+NIVV TPGR L H+ +++I+V DEADR+ ++GF L I LPS RQTL
Sbjct: 172 TNIVVCTPGRLLQHMDETPNFDCTSLQILVLDEADRILDMGFAPTLNAIIENLPSERQTL 231
Query: 682 LFSATLPKMLVEFARAGLSDPT 747
L+SAT + + + AR L +PT
Sbjct: 232 LYSATQTRSVKDLARLSLQEPT 253
Score = 62.5 bits (145), Expect = 1e-08
Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 5/95 (5%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TGSGKT F++PI+E L K T L AL++SPTRELA QT + ++G L
Sbjct: 94 AKTGSGKTLAFLIPIIETLW--RQKWTSMDGLGALVISPTRELAYQTFEVLVKIGNKHDL 151
Query: 440 TSAAILGGESIE-QQFNVMSGS----SPT*LLQHL 529
++ I+GG+ ++ +Q +M + +P LLQH+
Sbjct: 152 SAGLIIGGKDLKNEQKRIMKTNIVVCTPGRLLQHM 186
Score = 41.5 bits (93), Expect = 0.024
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
F +S L G+ K G+ PT IQ++ IP+AL+G+DV+ + G K L
Sbjct: 52 FSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTL 102
>UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14;
Pezizomycotina|Rep: ATP-dependent RNA helicase DBP4 -
Chaetomium globosum (Soil fungus)
Length = 825
Score = 71.7 bits (168), Expect = 2e-11
Identities = 35/80 (43%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Frame = +1
Query: 508 NIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
NI+V TPGR L H+ ++N++I+V DEADR+ ++GF + + LP++RQTLL
Sbjct: 176 NILVCTPGRMLQHLDQTANFDVNNLQILVLDEADRIMDMGFQSAVDALVEHLPTTRQTLL 235
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSAT K + + AR L +P
Sbjct: 236 FSATQSKRVSDLARLSLKEP 255
Score = 65.3 bits (152), Expect = 2e-09
Identities = 38/96 (39%), Positives = 62/96 (64%), Gaps = 6/96 (6%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TGSGKT F++P+LEKL + K T L ALI+SPTRELA+Q +R++G+
Sbjct: 97 AKTGSGKTLAFLVPVLEKLY--HAKWTEYDGLGALIISPTRELAVQIFEVLRKIGRNHFF 154
Query: 440 TSAAILGGESIEQQ------FNVMSGSSPT*LLQHL 529
++ ++GG+S++++ N++ +P +LQHL
Sbjct: 155 SAGLVIGGKSLKEEAERLGRMNILV-CTPGRMLQHL 189
>UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 578
Score = 71.3 bits (167), Expect = 3e-11
Identities = 35/82 (42%), Positives = 53/82 (64%), Gaps = 4/82 (4%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICA--RLP--SSRQ 675
+I+VATPGR L+ + + L +++ ++FDEADR+ ++GF Q++EIC +P RQ
Sbjct: 264 DILVATPGRLLYFTEKKIVSLSSVRYLIFDEADRMLDMGFEPQIREICEDNEMPPVGKRQ 323
Query: 676 TLLFSATLPKMLVEFARAGLSD 741
TL+FSAT PK + A L D
Sbjct: 324 TLMFSATFPKQIQRLAADFLDD 345
Score = 46.8 bits (106), Expect = 6e-04
Identities = 34/96 (35%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Frame = +2
Query: 233 IDRERCCSMARTGSGKTACFVLPILEKLLVPNNKPTPGK-NLR--------ALILSPTRE 385
+D+ S A+TGSGKTA F+ PI+ +L N P P + N ALIL+PTRE
Sbjct: 166 LDKRDLMSCAQTGSGKTAAFLFPIISDIL--KNPPMPRQSNFSHRVTVFPVALILAPTRE 223
Query: 386 LALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 493
L Q + T + S + GG Q M
Sbjct: 224 LGQQIYEEAVRFTEDTPIRSVCVYGGSDSYTQIQEM 259
Score = 33.5 bits (73), Expect = 6.2
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F + L + I K G+ P P+Q+ TIPI L +D++ + G K
Sbjct: 133 FYDIDLGEELDHNIFKAGFYHPMPVQKATIPIVLDKRDLMSCAQTGSGK 181
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 71.3 bits (167), Expect = 3e-11
Identities = 33/80 (41%), Positives = 49/80 (61%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
+ +VV TPGR L + + LKLD +K +V DEAD + +GF + ++ I ++ P RQT+L
Sbjct: 174 ARVVVGTPGRLLDLIRQGSLKLDQLKTLVLDEADEMLSMGFIDDIETILSQTPKDRQTML 233
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSATL ++ A L P
Sbjct: 234 FSATLSSRVMSIANRYLHSP 253
Score = 44.4 bits (100), Expect = 0.003
Identities = 29/74 (39%), Positives = 39/74 (52%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TG+GKTA F LP+L NN K ++AL+L+PTRELA Q + G
Sbjct: 99 AQTGTGKTAAFGLPLL------NNIDFSKKCVQALVLAPTRELAQQVGDALATYSGDDGR 152
Query: 440 TSAAILGGESIEQQ 481
+ GG S + Q
Sbjct: 153 NVLVVYGGSSYQAQ 166
Score = 42.7 bits (96), Expect = 0.010
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+F L ++ + K G+ QPTPIQ K IP+ L G D++ + G K
Sbjct: 56 SFTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGK 105
>UniRef50_Q2BIX8 Cluster: Probable ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Probable ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 410
Score = 71.3 bits (167), Expect = 3e-11
Identities = 35/80 (43%), Positives = 51/80 (63%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
+++VVATPGR + ++LD++ ++V DEADR+ E GF E L +I P +RQTLL
Sbjct: 121 ADLVVATPGRLIPHLENRSIELDSLDLLVLDEADRILETGFKEALDQILTLCPEARQTLL 180
Query: 685 FSATLPKMLVEFARAGLSDP 744
SATLP + + A L +P
Sbjct: 181 VSATLPTSVRKLAERILQEP 200
Score = 53.6 bits (123), Expect = 5e-06
Identities = 27/72 (37%), Positives = 44/72 (61%)
Frame = +2
Query: 266 TGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTS 445
TGSGKTA +++P++++L + P + +A++L P RELA Q F +L L +
Sbjct: 46 TGSGKTAAYLIPVIQELSAGKS---PTRQPKAIVLVPVRELAEQIASFFDKLAAGLDLNA 102
Query: 446 AAILGGESIEQQ 481
AI+GGE ++Q
Sbjct: 103 VAIVGGEDFKKQ 114
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 71.3 bits (167), Expect = 3e-11
Identities = 32/79 (40%), Positives = 51/79 (64%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+IVV TPGR + + L+L+ ++ VV DEADR+ ++GF +++I R P RQTLL
Sbjct: 126 HIVVGTPGRVIDLMTRRALQLEMLRTVVLDEADRMLDIGFRPDIEKILRRCPEERQTLLL 185
Query: 688 SATLPKMLVEFARAGLSDP 744
SAT+P + + A+ + +P
Sbjct: 186 SATVPPTIEKLAQRYMRNP 204
Score = 54.4 bits (125), Expect = 3e-06
Identities = 31/74 (41%), Positives = 46/74 (62%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
ARTG+GKTA F +PI+E+L + P +N +ALIL+PTRELA+Q + +L +
Sbjct: 48 ARTGTGKTAAFGIPIIERL---EHGPN-SRNPQALILTPTRELAVQVRDEIAKLTHGQRI 103
Query: 440 TSAAILGGESIEQQ 481
A+ GG+ + Q
Sbjct: 104 NVVAVYGGKPLRSQ 117
Score = 35.9 bits (79), Expect = 1.2
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+ M LS + + Y QP+PIQ IP+AL G+DV+ G K
Sbjct: 6 YADMALSVEMKAALEAARYIQPSPIQAAIIPLALEGRDVLGQARTGTGK 54
>UniRef50_Q54DV7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 777
Score = 71.3 bits (167), Expect = 3e-11
Identities = 37/90 (41%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Frame = +1
Query: 505 SNIVVATPGRFLHICI---EMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQ 675
+ I++ATPGR + + E+ L + +++ DEADR+ +LGFG+QLQ+I ++ RQ
Sbjct: 438 NEIIIATPGRLVDLIQRSKEVVGLLGGVGMLILDEADRMLQLGFGDQLQKISEQIRPDRQ 497
Query: 676 TLLFSATLPKMLVEFARAGLSDPTLDKIRV 765
TL+FSAT P+ + + A+ L++P KIRV
Sbjct: 498 TLMFSATFPQTMQDAAKKWLTNPL--KIRV 525
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 71.3 bits (167), Expect = 3e-11
Identities = 33/83 (39%), Positives = 53/83 (63%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFS 690
I++ TPGR + L L+NIK V+ DEAD + ++GF E ++ I +P RQ LLFS
Sbjct: 126 IIIGTPGRVMDHIDRGTLSLNNIKTVILDEADEMLDMGFREDIEYILEDIPYERQFLLFS 185
Query: 691 ATLPKMLVEFARAGLSDPTLDKI 759
ATLP+ +++ A+ ++P + K+
Sbjct: 186 ATLPQEILQLAQRYQTNPEIVKV 208
Score = 53.2 bits (122), Expect = 7e-06
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF-TG 436
A+TG+GKTA F +P+LE + +N NL+A+IL PTRELA+Q +R+L +
Sbjct: 48 AQTGTGKTAAFGIPLLENIDSEDN------NLQAIILCPTRELAIQVAEELRKLSVYLPK 101
Query: 437 LTSAAILGGESIEQQFNVM 493
+ + GG+ I++Q +
Sbjct: 102 IDVLPVYGGQPIDRQIKAL 120
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 71.3 bits (167), Expect = 3e-11
Identities = 36/81 (44%), Positives = 51/81 (62%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+IVV TPGR L ++ +I+I V DEAD++ ++GF ++ ++I +LP RQTLLF
Sbjct: 122 HIVVGTPGRLLEHMRREYVRTSDIRIAVLDEADKMLDMGFIDEAEKILKKLPERRQTLLF 181
Query: 688 SATLPKMLVEFARAGLSDPTL 750
SATL + AR L DP L
Sbjct: 182 SATLSPPVQMLARKYLKDPEL 202
Score = 62.9 bits (146), Expect = 9e-09
Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
ARTG+GKTA F +P++E + +PT K ++ L++ PTRELA+Q + +GK G+
Sbjct: 46 ARTGTGKTAAFGIPMVEAI-----RPT-SKGVQGLVVVPTRELAVQVAEELTRIGKVRGI 99
Query: 440 TSAAILGGESIEQQFNVMSG------SSPT*LLQHLGASY--TSALRCA 562
S AI GG+ Q + +P LL+H+ Y TS +R A
Sbjct: 100 RSVAIYGGQDFRSQVKALEELPHIVVGTPGRLLEHMRREYVRTSDIRIA 148
Score = 39.5 bits (88), Expect = 0.095
Identities = 15/49 (30%), Positives = 30/49 (61%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F + L+ +++ + + G+++ TPIQ + IP+A+ GKD++ G K
Sbjct: 4 FTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGK 52
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 71.3 bits (167), Expect = 3e-11
Identities = 33/80 (41%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Frame = +1
Query: 508 NIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
+IVVATPGR + H+ M + LD++ +++ DEADRL + GF ++ E+ P RQT+L
Sbjct: 290 DIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRRQTML 349
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSAT+ + + E + L+ P
Sbjct: 350 FSATMTEEVKELVKLSLNKP 369
Score = 66.9 bits (156), Expect = 5e-10
Identities = 36/77 (46%), Positives = 48/77 (62%)
Frame = +2
Query: 251 CSMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF 430
C+ A TGSGKTA F LP LE+LL +P R LIL+PTRELA+Q ++ L +F
Sbjct: 208 CASAITGSGKTAAFALPTLERLLF---RPKRVFATRVLILTPTRELAVQIHSMIQNLAQF 264
Query: 431 TGLTSAAILGGESIEQQ 481
T + I+GG S+ +Q
Sbjct: 265 TDIKCGLIVGGLSVREQ 281
Score = 50.8 bits (116), Expect = 4e-05
Identities = 26/73 (35%), Positives = 35/73 (47%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQLVXXXXXXRN 314
F + LS P+L+ GYK+PTPIQ IP+ALTG+D+ G K
Sbjct: 169 FMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLER 228
Query: 315 FLFRTTNLHLERI 353
LFR + R+
Sbjct: 229 LLFRPKRVFATRV 241
>UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 594
Score = 70.9 bits (166), Expect = 3e-11
Identities = 34/79 (43%), Positives = 51/79 (64%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+I+VATPGR + + + +KL + + DEADR+ ++GF E ++ I + RQTLLF
Sbjct: 313 HIMVATPGRLMDMLDKKMVKLGVCRYLCMDEADRMIDMGFEEDVRTIFSFFEGQRQTLLF 372
Query: 688 SATLPKMLVEFARAGLSDP 744
SAT+PK + FAR+ L P
Sbjct: 373 SATMPKKIQNFARSALVKP 391
Score = 39.9 bits (89), Expect = 0.072
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQLV 290
+F+ M +L G+ ++G +PTPIQ + IP L+G+D++ G K LV
Sbjct: 180 SFKEMKFHKGILLGLEQKGITKPTPIQVQGIPAVLSGRDIIGIAFTGSGKTLV 232
Score = 35.9 bits (79), Expect = 1.2
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKN--LRALILSPTRELALQTLRFVR 415
+A TGSGKT FVLP++ L G+N LI+ P+RELA QT ++
Sbjct: 222 IAFTGSGKTLVFVLPLIMFCLEQEVALPFGRNEGPYGLIICPSRELAKQTYDIIQ 276
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 70.9 bits (166), Expect = 3e-11
Identities = 34/88 (38%), Positives = 53/88 (60%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
+ +VV TPGR L + L L+N+K + DEAD + +GF E ++ I +LP +Q L
Sbjct: 126 AQVVVGTPGRILDHIDKGTLLLNNLKTFILDEADEMLRMGFIEDVETILEKLPEKKQMAL 185
Query: 685 FSATLPKMLVEFARAGLSDPTLDKIRVD 768
FSAT+P + + A L+DP +IR++
Sbjct: 186 FSATMPYRIRQIANTYLNDPASIEIRME 213
Score = 52.4 bits (120), Expect = 1e-05
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +2
Query: 254 SMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF- 430
++A+TG+GKTA F LPIL+ L P T +ALIL+PTRELA+Q L K+
Sbjct: 48 ALAQTGTGKTAAFALPILQN-LSPEISTT-----QALILAPTRELAIQVAEQFELLSKYQ 101
Query: 431 TGLTSAAILGGESIEQQ 481
+T A + GG+ +Q
Sbjct: 102 RNVTIAVLCGGQEYGRQ 118
Score = 33.1 bits (72), Expect = 8.3
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F + S + K + + P+PIQ +TIP+ L G+D + + G K
Sbjct: 8 FSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGK 56
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 70.9 bits (166), Expect = 3e-11
Identities = 42/86 (48%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = +1
Query: 505 SNIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTL 681
+ I+VATPGR H+ + L L +K +V DEAD + +LGF E L+ I A LP SRQT+
Sbjct: 143 AQILVATPGRLCDHLRRDEQL-LSTVKHLVLDEADEMLKLGFMEDLEVIFAALPESRQTV 201
Query: 682 LFSATLPKMLVEFARAGLSDPTLDKI 759
LFSATLP + E A L +P KI
Sbjct: 202 LFSATLPHSIREIAEKHLHEPQHVKI 227
Score = 46.8 bits (106), Expect = 6e-04
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQ-TLRFVRELGKFTG 436
A+TG+GKTA F LP+L ++ +P + LIL+PTRELALQ F + G
Sbjct: 67 AQTGTGKTAAFALPMLSRIDPARREP------QLLILAPTRELALQVATAFETYASQLPG 120
Query: 437 LTSAAILGGESIEQQFNVM 493
+ A+ GG + Q +
Sbjct: 121 VGVVAVYGGAPMGPQLKAL 139
Score = 46.4 bits (105), Expect = 8e-04
Identities = 20/52 (38%), Positives = 32/52 (61%)
Frame = +3
Query: 126 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+G F ++G+ VL IT GY++P+PIQ + IP+ L G D++ + G K
Sbjct: 22 TGGFAALGIHPAVLAAITAVGYEEPSPIQAQAIPVILAGHDMIGQAQTGTGK 73
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 70.9 bits (166), Expect = 3e-11
Identities = 35/88 (39%), Positives = 51/88 (57%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
++ VVATPGR L + L L +++ V DEAD + +GF E+++ + + P SRQTLL
Sbjct: 121 ADAVVATPGRALDYLRQGVLDLSRVEVAVLDEADEMLSMGFEEEVEALLSATPPSRQTLL 180
Query: 685 FSATLPKMLVEFARAGLSDPTLDKIRVD 768
FSATLP A + +P L + D
Sbjct: 181 FSATLPSWAKRLAERYMKNPVLINVIKD 208
Score = 50.8 bits (116), Expect = 4e-05
Identities = 32/74 (43%), Positives = 43/74 (58%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
ARTG+GKT F LPI E+ L P+ + G+ RAL+L+PTRELALQ + + L
Sbjct: 45 ARTGTGKTLAFALPIAER-LAPSQE--RGRKPRALVLTPTRELALQVASELTAVAPH--L 99
Query: 440 TSAAILGGESIEQQ 481
A+ GG +Q
Sbjct: 100 KVVAVYGGTGYGKQ 113
Score = 39.5 bits (88), Expect = 0.095
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
F+ L +L+ + RG PTPIQ +P+AL GKD++ G K L
Sbjct: 3 FKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTL 53
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 70.9 bits (166), Expect = 3e-11
Identities = 31/80 (38%), Positives = 51/80 (63%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
++I++ATPGR L + + L +++++V DEAD++ +LGF L+ I +P RQTL
Sbjct: 126 TDILIATPGRLLDLIDQKAFNLGSVEVLVLDEADQMLDLGFVHALRRISQLVPKERQTLF 185
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSAT+PK + E ++P
Sbjct: 186 FSATMPKAIKELVSGYCNNP 205
Score = 63.3 bits (147), Expect = 7e-09
Identities = 31/77 (40%), Positives = 49/77 (63%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG 436
+A+TG+GKTA F+LP +++L +N+ P K+ R L+L+PTREL Q ++ G G
Sbjct: 45 IAQTGTGKTAAFMLPSIDRLREADNR-IPFKSCRMLVLAPTRELVSQIAASAKDYGALAG 103
Query: 437 LTSAAILGGESIEQQFN 487
L +I+GG S+ + N
Sbjct: 104 LKVQSIVGGTSVNKDRN 120
Score = 47.2 bits (107), Expect = 5e-04
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F +GLS PVL+ + +GY PTPIQ + IP L G+D++ + G K
Sbjct: 4 FSDLGLSQPVLQALDLKGYSTPTPIQEQAIPPVLEGRDLLGIAQTGTGK 52
>UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 411
Score = 70.9 bits (166), Expect = 3e-11
Identities = 38/83 (45%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEI---CARLPSSRQ 675
+++VVATPGR L +C L LD I +V DEADR+ +G EQL++I +RQ
Sbjct: 164 ADVVVATPGRLLDLCKRGALCLDKITYLVMDEADRMLGMGMEEQLRKIVGLATGTSRARQ 223
Query: 676 TLLFSATLPKMLVEFARAGLSDP 744
TLL+SATLP+ L AR+ + +P
Sbjct: 224 TLLWSATLPESLERLARSAVLNP 246
Score = 43.6 bits (98), Expect = 0.006
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPT-PGKNLRALILSPTRELALQTLRFVRELGKFT 433
+A TGSGKT + LP+ +L+ P+ PG ALIL+PTREL Q V E+
Sbjct: 83 LAETGSGKTLAYSLPLC--MLLRTKAPSNPGDTPVALILTPTRELMQQVFMNVSEMLDVI 140
Query: 434 GLTSAAILGGESIEQQ 481
+ GG + Q
Sbjct: 141 RCPGNPVCGGVPVSTQ 156
Score = 34.3 bits (75), Expect = 3.6
Identities = 14/52 (26%), Positives = 29/52 (55%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
+F + L + + K+ ++ PTPIQ +++ ++G+D++ E G K L
Sbjct: 41 SFHDLNLPPELSTYLAKKNFQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTL 92
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 70.9 bits (166), Expect = 3e-11
Identities = 35/80 (43%), Positives = 51/80 (63%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
S+IVV TPGR L + L LD + +V DEAD + +GF EQ++ I LP+ R T+L
Sbjct: 121 SHIVVGTPGRVLDHIEKGTLPLDRLSYLVIDEADEMLNMGFIEQVEAIIKHLPTERTTML 180
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSATLP+ + + +R + +P
Sbjct: 181 FSATLPQDIEKLSRQYMQNP 200
Score = 58.0 bits (134), Expect = 3e-07
Identities = 31/84 (36%), Positives = 50/84 (59%)
Frame = +2
Query: 230 SIDRERCCSMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRF 409
+++R+ ++TGSGKTA F +P+ E NKP +ALIL+PTRELA+Q
Sbjct: 36 ALERKDLVVKSQTGSGKTASFGIPLCELANWDENKP------QALILTPTRELAVQVKED 89
Query: 410 VRELGKFTGLTSAAILGGESIEQQ 481
+ +G+F + + A+ G S ++Q
Sbjct: 90 ITNIGRFKRIKATAVFGKSSFDKQ 113
Score = 37.5 bits (83), Expect = 0.38
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F++ +S +L+ + GY +PT +Q+ IP AL KD+V + G K
Sbjct: 4 FKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGK 52
>UniRef50_Q5KN79 Cluster: ATP-dependent RNA helicase DBP4; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP4 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 859
Score = 70.9 bits (166), Expect = 3e-11
Identities = 37/99 (37%), Positives = 66/99 (66%), Gaps = 6/99 (6%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TGSGKT F++P+LE+L + P G L A+++SPTRELA+QT +R++GK+
Sbjct: 104 AKTGSGKTLAFLIPLLERLYLEKWGPMDG--LGAVVISPTRELAVQTFMQLRDIGKYHNF 161
Query: 440 TSAAILGGESIEQQ------FNVMSGSSPT*LLQHLGAS 538
++ ++GG+ ++++ N++ ++P LLQHL ++
Sbjct: 162 SAGLVIGGKPLKEEQERLGRMNILI-ATPGRLLQHLDST 199
Score = 57.2 bits (132), Expect = 4e-07
Identities = 37/89 (41%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Frame = +1
Query: 508 NIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLP------- 663
NI++ATPGR L H+ + +K++V DEADRL +LGF L+ I +
Sbjct: 183 NILIATPGRLLQHLDSTVGFDSSAVKVLVLDEADRLLDLGFLPALKAIVSHFSPVQTAPG 242
Query: 664 --SSRQTLLFSATLPKMLVEFARAGLSDP 744
SRQTLLFSAT K L A+ L +P
Sbjct: 243 SRPSRQTLLFSATQSKDLAALAKLSLYEP 271
Score = 33.9 bits (74), Expect = 4.7
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
F + +S KG+ + PTPIQ IP AL +D++ + G K L
Sbjct: 62 FSELPMSSKTQKGLKSSHFLNPTPIQSLAIPPALQARDILGSAKTGSGKTL 112
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 70.5 bits (165), Expect = 4e-11
Identities = 35/86 (40%), Positives = 55/86 (63%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
++IVV TPGR L + L L+ +K +V DEAD + +GF +Q++ I LP+ R T+L
Sbjct: 123 THIVVGTPGRVLDHIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPTKRMTML 182
Query: 685 FSATLPKMLVEFARAGLSDPTLDKIR 762
FSATLP+ + +R ++ PT +I+
Sbjct: 183 FSATLPEDVERLSRTYMNAPTHIEIK 208
Score = 55.6 bits (128), Expect = 1e-06
Identities = 30/74 (40%), Positives = 45/74 (60%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
++TGSGKTA F +P+ E + NKP +AL+L+PTRELA+Q + +G+F +
Sbjct: 48 SQTGSGKTASFGIPLCEMVEWEENKP------QALVLTPTRELAVQVKEDITNIGRFKRI 101
Query: 440 TSAAILGGESIEQQ 481
+AAI G +Q
Sbjct: 102 KAAAIYGKSPFARQ 115
Score = 40.3 bits (90), Expect = 0.054
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +3
Query: 123 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
S +F + LS V + +T GY+ PT +Q + IP+AL KD+V + G K
Sbjct: 2 SKKSFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGK 54
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 70.5 bits (165), Expect = 4e-11
Identities = 39/83 (46%), Positives = 53/83 (63%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
++TG+GKTA F LP+LEK+ P + +RALIL PTRELALQ ++ L K GL
Sbjct: 73 SKTGTGKTAAFGLPLLEKI------PADERRVRALILCPTRELALQVADELKMLAKHKGL 126
Query: 440 TSAAILGGESIEQQFNVMSGSSP 508
AAI GG S++QQ + + +P
Sbjct: 127 KIAAIYGGASMKQQEDALEEGTP 149
Score = 58.4 bits (135), Expect = 2e-07
Identities = 31/64 (48%), Positives = 37/64 (57%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFS 690
I+V TPGR LKLD V DEAD + GF E++ I RLP +RQ LLFS
Sbjct: 150 IIVGTPGRVFDHINRGNLKLDACDHAVLDEADEMLNQGFYEEVTRILDRLPKTRQVLLFS 209
Query: 691 ATLP 702
AT+P
Sbjct: 210 ATVP 213
Score = 41.5 bits (93), Expect = 0.024
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F M LS P+ + +RGY PTP+Q + A+ GKD++ + G K
Sbjct: 31 FDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVRSKTGTGK 79
>UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein;
n=37; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain MR-4)
Length = 427
Score = 70.5 bits (165), Expect = 4e-11
Identities = 30/67 (44%), Positives = 47/67 (70%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
++++VATPGR L + LKL+ + +V DEADR+ LGF ++L ++ LP+ +QTLL
Sbjct: 136 ADVLVATPGRLLDLLASNALKLNRVLALVLDEADRMLSLGFTDELNQVLEALPAKKQTLL 195
Query: 685 FSATLPK 705
+SAT P+
Sbjct: 196 YSATFPE 202
Score = 52.4 bits (120), Expect = 1e-05
Identities = 31/76 (40%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTL-RFVRELGKFTG 436
A TGSGKTA F +P+L++L +R L+L PTRELA Q F+ F G
Sbjct: 53 ANTGSGKTAAFAVPLLQRLFEAKTAEKSAGQVRCLVLVPTRELAQQVADSFLSYASHFNG 112
Query: 437 -LTSAAILGGESIEQQ 481
L A GG S+ Q
Sbjct: 113 QLKIVAAFGGVSVNLQ 128
Score = 42.7 bits (96), Expect = 0.010
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +3
Query: 123 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
S +F +G+ P+ +T+ Y PTPIQ TIP L+G+DV+ G K
Sbjct: 7 SVASFAELGIIAPLCNRLTELTYAAPTPIQAATIPAVLSGRDVLAGANTGSGK 59
>UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Polynucleobacter sp. QLW-P1DMWA-1
Length = 500
Score = 70.5 bits (165), Expect = 4e-11
Identities = 32/77 (41%), Positives = 48/77 (62%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFS 690
+VVATPGR L +C ++LD++K +V DEADR+ ++GF + L+ I R QTL+FS
Sbjct: 149 LVVATPGRLLDLCDSKAIRLDDVKQLVIDEADRMLDMGFADDLEAIDKRCAGRNQTLMFS 208
Query: 691 ATLPKMLVEFARAGLSD 741
AT ++ A +D
Sbjct: 209 ATFAPKIMSLANELTTD 225
Score = 60.9 bits (141), Expect = 4e-08
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLV--PNNKPTPGK-NLRALILSPTRELALQTLRFVRELGK- 427
++TGSGKTA F+LP++ +L+ PNN P PG+ + L+L PTRELA Q L +
Sbjct: 63 SQTGSGKTAAFLLPLINQLIEDNPNNSPVPGRAQPKVLVLCPTRELAQQVAADAVNLVRG 122
Query: 428 FTGLTSAAILGGESIEQQFNVMSGS 502
G+ A ++GG +Q + G+
Sbjct: 123 MKGIRIATVMGGMPYGKQIQALKGA 147
>UniRef50_A7P0R7 Cluster: Chromosome chr19 scaffold_4, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr19 scaffold_4, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 750
Score = 70.5 bits (165), Expect = 4e-11
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Frame = +1
Query: 508 NIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
NI+V TPGR L H+ ++++V DEADR+ ++GF + L I ++LP RQTLL
Sbjct: 194 NILVCTPGRLLQHMDETPNFDCSQLQVLVLDEADRILDVGFKKALNAIISQLPKHRQTLL 253
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSAT K + + AR L DP
Sbjct: 254 FSATQTKSVQDLARLSLKDP 273
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/68 (39%), Positives = 43/68 (63%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TGSGKT F++P+LEKL P G + ++I+SPTREL Q ++ +GK+
Sbjct: 114 AKTGSGKTLAFLIPVLEKLYRLRWGPEDG--VGSIIISPTRELTGQLFDVLKSVGKYHSF 171
Query: 440 TSAAILGG 463
++ ++GG
Sbjct: 172 SAGLLIGG 179
Score = 33.1 bits (72), Expect = 8.3
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
F + LS + G+ K Y T IQR ++P +L G+D++ + G K L
Sbjct: 72 FDRLPLSQKTIDGLKKSEYVTMTEIQRASLPHSLCGRDILGAAKTGSGKTL 122
>UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3;
n=13; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 3 - Arabidopsis thaliana (Mouse-ear cress)
Length = 748
Score = 70.5 bits (165), Expect = 4e-11
Identities = 32/79 (40%), Positives = 51/79 (64%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
++VV TPGR + + LKL ++ +V DEAD++ +GF E ++ I LP+ RQ++LF
Sbjct: 230 DVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLF 289
Query: 688 SATLPKMLVEFARAGLSDP 744
SAT+P + + AR L +P
Sbjct: 290 SATMPTWVKKLARKYLDNP 308
Score = 43.6 bits (98), Expect = 0.006
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPT----PGKNLRALILSPTRELALQTLRFVRELGK 427
A+TG+GKT F +PI+++L T G+ + L+L+PTRELA Q + ++E
Sbjct: 146 AKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAP 205
Query: 428 FTGLTSAAILGGESIEQQFNVMS 496
+ L++ + GG S Q + ++
Sbjct: 206 Y--LSTVCVYGGVSYTIQQSALT 226
>UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;
Coelomata|Rep: ATP-dependent RNA helicase DDX42 - Homo
sapiens (Human)
Length = 938
Score = 70.5 bits (165), Expect = 4e-11
Identities = 35/80 (43%), Positives = 49/80 (61%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
+ IVV TPGR + + L + +VFDEADR+F++GF Q++ I + + RQTLL
Sbjct: 377 AEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLL 436
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSAT K + + AR L DP
Sbjct: 437 FSATFRKKIEKLARDILIDP 456
Score = 53.2 bits (122), Expect = 7e-06
Identities = 30/75 (40%), Positives = 43/75 (57%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG 436
+A+TGSGKTA F+ P+L ++ + PG A+I+ PTREL Q + GK
Sbjct: 296 IAKTGSGKTAAFIWPMLIHIM-DQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYN 354
Query: 437 LTSAAILGGESIEQQ 481
L S A+ GG S+ +Q
Sbjct: 355 LRSVAVYGGGSMWEQ 369
Score = 39.9 bits (89), Expect = 0.072
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+F G ++ I K Y QPTPIQ + +P+AL+G+D++ + G K
Sbjct: 254 SFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGK 303
>UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP4 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 770
Score = 70.5 bits (165), Expect = 4e-11
Identities = 51/137 (37%), Positives = 76/137 (55%), Gaps = 4/137 (2%)
Frame = +1
Query: 343 WKEFEGINSLTN*RTRITDIKICEGARKIHWINECSYSWWRVH*AA-V*CDVWLFS--NI 513
W EF+G+ +L TR ++I E KI + S+S V V ++ S NI
Sbjct: 108 WTEFDGLGALIISPTRELAMQIYEVLTKIG--SHTSFSAGLVIGGKDVKFELERISRINI 165
Query: 514 VVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFS 690
++ TPGR L H+ + L N++++V DEADR ++GF + L I + L SRQTLLFS
Sbjct: 166 LIGTPGRILQHLDQAVGLNTSNLQMLVLDEADRCLDMGFKKTLDAIVSTLSPSRQTLLFS 225
Query: 691 ATLPKMLVEFARAGLSD 741
AT + + + AR L+D
Sbjct: 226 ATQSQSVADLARLSLTD 242
Score = 66.9 bits (156), Expect = 5e-10
Identities = 37/96 (38%), Positives = 59/96 (61%), Gaps = 6/96 (6%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TGSGKT F++P++EKL K T L ALI+SPTRELA+Q + ++G T
Sbjct: 85 AKTGSGKTLAFLVPVIEKLY--REKWTEFDGLGALIISPTRELAMQIYEVLTKIGSHTSF 142
Query: 440 TSAAILGGESIE------QQFNVMSGSSPT*LLQHL 529
++ ++GG+ ++ + N++ G +P +LQHL
Sbjct: 143 SAGLVIGGKDVKFELERISRINILIG-TPGRILQHL 177
Score = 37.5 bits (83), Expect = 0.38
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
F+ + +S P LKG+ + + + T IQ +IP++L G DV+ + G K L
Sbjct: 43 FKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTL 93
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 70.1 bits (164), Expect = 6e-11
Identities = 32/79 (40%), Positives = 48/79 (60%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+++V TPGR + L L +K +V DEAD + +GF E ++E+ +LP+SRQ LF
Sbjct: 136 HVIVGTPGRVIDHLERGTLDLSELKTLVLDEADEMLRMGFIEDVEEVLRKLPASRQVALF 195
Query: 688 SATLPKMLVEFARAGLSDP 744
SAT+P + A+ L DP
Sbjct: 196 SATMPPQIRRIAQTYLQDP 214
Score = 52.8 bits (121), Expect = 1e-05
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLR-FVRELGKFTG 436
A+TG+GKTA F LP+L + ++ KP + L+L+PTRELA+Q F R +G
Sbjct: 59 AQTGTGKTAAFALPLLTRTVLNQVKP------QVLVLAPTRELAIQVAEAFQRYAASISG 112
Query: 437 LTSAAILGGESIEQQ 481
+ GG+S QQ
Sbjct: 113 FRVLPVYGGQSYGQQ 127
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/49 (44%), Positives = 31/49 (63%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F +GLS V++ +TK GY+ P+PIQ TIP L G+DV+ + G K
Sbjct: 17 FADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGK 65
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 70.1 bits (164), Expect = 6e-11
Identities = 36/81 (44%), Positives = 55/81 (67%)
Frame = +2
Query: 227 NSIDRERCCSMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLR 406
+ ++ + +A+TGSGKTA F LPIL+K++ +K P K RALIL+PTRELA+Q +
Sbjct: 120 SQLEGQDILGIAQTGSGKTAAFSLPILQKIIGLGDKRRP-KTARALILAPTRELAVQIEQ 178
Query: 407 FVRELGKFTGLTSAAILGGES 469
+R + K +++A +LGG S
Sbjct: 179 TIRNVSKSAHISTALVLGGVS 199
Score = 62.1 bits (144), Expect = 2e-08
Identities = 29/79 (36%), Positives = 46/79 (58%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
++++ATPGR + + + L + +V DEADR+ ++GF ++ I + RQT LF
Sbjct: 212 DVLIATPGRLTDLMRDGLVDLSQTRWLVLDEADRMLDMGFINDVKRIAKATHAERQTALF 271
Query: 688 SATLPKMLVEFARAGLSDP 744
SAT+PK + A L DP
Sbjct: 272 SATMPKEIASLAERLLRDP 290
Score = 42.3 bits (95), Expect = 0.013
Identities = 18/53 (33%), Positives = 32/53 (60%)
Frame = +3
Query: 123 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
++G F ++G++ +LKG+ G +P PIQ + IP L G+D++ + G K
Sbjct: 85 NTGGFAALGITGVLLKGVEAAGMTEPKPIQTQAIPSQLEGQDILGIAQTGSGK 137
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 70.1 bits (164), Expect = 6e-11
Identities = 35/80 (43%), Positives = 50/80 (62%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+IVV TPGR L + L L++I +V DEAD + +GF + L+EI L + RQTLLF
Sbjct: 126 DIVVGTPGRVLDLIRRKSLPLNDIGFLVLDEADEMLNMGFIDDLEEIVKSLKTDRQTLLF 185
Query: 688 SATLPKMLVEFARAGLSDPT 747
SAT+P + + AR + + T
Sbjct: 186 SATMPPQIKKLARNYMKEDT 205
Score = 53.2 bits (122), Expect = 7e-06
Identities = 31/78 (39%), Positives = 44/78 (56%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TG+GKTA F I+ K +P +ALIL+PTRELA+Q + LGK L
Sbjct: 48 AQTGTGKTAAFGCAIINNADFSGKKKSP----KALILAPTRELAIQVNEELVRLGKHEKL 103
Query: 440 TSAAILGGESIEQQFNVM 493
+ I GG+ I++Q +
Sbjct: 104 SVLPIYGGQPIDRQIRAL 121
Score = 42.7 bits (96), Expect = 0.010
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F +GL +LK I G+++P+ IQ ++IP+AL G D++ + G K
Sbjct: 6 FDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGK 54
>UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2;
Frankia|Rep: DEAD/DEAH box helicase-like - Frankia sp.
(strain CcI3)
Length = 649
Score = 70.1 bits (164), Expect = 6e-11
Identities = 33/79 (41%), Positives = 50/79 (63%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+IVV TPGR L + + L L + +V DEAD + +LGF ++ I ++LP+ RQT+LF
Sbjct: 209 DIVVGTPGRLLDLARQHVLDLAGVGTLVLDEADEMLDLGFLPDVERIMSQLPTERQTMLF 268
Query: 688 SATLPKMLVEFARAGLSDP 744
SAT+P ++ AR + P
Sbjct: 269 SATMPGPVISLARRFMKRP 287
Score = 50.0 bits (114), Expect = 7e-05
Identities = 28/88 (31%), Positives = 47/88 (53%)
Frame = +2
Query: 230 SIDRERCCSMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRF 409
++ R ARTG+GKT F +P+++ +L + G+ +AL++ PTREL +Q
Sbjct: 119 ALARNDIIGQARTGTGKTLAFGVPVVQTVLAAK-EGADGRP-QALVVVPTRELCVQVTAD 176
Query: 410 VRELGKFTGLTSAAILGGESIEQQFNVM 493
V G GL ++ GG + E Q + +
Sbjct: 177 VTRAGARRGLRVLSVYGGRAYEPQLSAL 204
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 70.1 bits (164), Expect = 6e-11
Identities = 33/79 (41%), Positives = 51/79 (64%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+I++ATPGR L + + L L NI+ V DEADR+ ++GF +++I A LP +Q+L F
Sbjct: 207 DILIATPGRLLDLMNQGHLHLRNIEFFVLDEADRMLDMGFIHDIRKILAELPKKKQSLFF 266
Query: 688 SATLPKMLVEFARAGLSDP 744
SAT+P + A + L +P
Sbjct: 267 SATMPPEITRLAASILHNP 285
Score = 62.1 bits (144), Expect = 2e-08
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = +2
Query: 233 IDRERCCSMARTGSGKTACFVLPILEKL-LVPNNKPTPGKNLRALILSPTRELALQTLRF 409
+D A+TG+GKTA F +P+L+ L V N+ + +R+LI++PTRELA+Q
Sbjct: 117 LDGNDLLGCAQTGTGKTAAFAIPVLQLLNAVKTNEKK--RKIRSLIITPTRELAIQIGES 174
Query: 410 VRELGKFTGLTSAAILGG 463
+ G+ TGLTS I GG
Sbjct: 175 FKAYGRHTGLTSTVIFGG 192
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/49 (38%), Positives = 31/49 (63%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F+S+ + P+L+ I + GY+ PTPIQ + IP+ L G D++ + G K
Sbjct: 84 FRSLAIIEPILQAIEEEGYQTPTPIQAEAIPLILDGNDLLGCAQTGTGK 132
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 70.1 bits (164), Expect = 6e-11
Identities = 35/84 (41%), Positives = 51/84 (60%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
++V ATPGR L + + L +++I+V DE DR+ ++GF ++ I + P +RQTL F
Sbjct: 253 DVVAATPGRLLDHIEQGTMTLADVEILVLDEVDRMLDMGFLPDVKRIVQQCPQARQTLFF 312
Query: 688 SATLPKMLVEFARAGLSDPTLDKI 759
SATLP L + A L DP KI
Sbjct: 313 SATLPPELAQLASWALRDPVEIKI 336
Score = 59.3 bits (137), Expect = 1e-07
Identities = 33/74 (44%), Positives = 43/74 (58%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TG+GKTA F LPIL KL + LR L+L PTRELALQ ++ K+T L
Sbjct: 177 AQTGTGKTAAFALPILHKLGAHERR------LRCLVLEPTRELALQVEEAFQKYSKYTDL 230
Query: 440 TSAAILGGESIEQQ 481
T+ + GG +Q
Sbjct: 231 TATVVYGGVGYGKQ 244
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
AF +GL+ + +T+ GY +PTPIQ + +P L G+DV + G K
Sbjct: 134 AFSKLGLNDALAFAVTEMGYTEPTPIQAQAVPAVLAGRDVTGSAQTGTGK 183
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 70.1 bits (164), Expect = 6e-11
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
+ +VV TPGR + + + L L +++++V DEAD + +GF E ++ I + P R T L
Sbjct: 165 AQVVVGTPGRVIDLIEKGALDLSHVRMLVLDEADEMLRMGFAEDVETIASSAPDDRLTAL 224
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSAT+P + + AR L DP
Sbjct: 225 FSATMPAAIEKVAREHLKDP 244
Score = 46.4 bits (105), Expect = 8e-04
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG 436
+A+TG+GKTA F LP+L +V ++ +N++AL+L+PTRELA+Q+ + + + T
Sbjct: 88 IAQTGTGKTAAFGLPLLA--IVDADE----RNVQALVLAPTRELAMQSAQAIEDFAARTA 141
Query: 437 -LTSAAILGGESIEQQFNVM 493
L + GG Q +
Sbjct: 142 RLDVVPVYGGSPYGPQIGAL 161
Score = 39.5 bits (88), Expect = 0.095
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F S+GL +L +T G++ PTPIQ IP L +DVV + G K
Sbjct: 47 FASLGLPEEILAAVTDMGFRVPTPIQAAAIPPLLELRDVVGIAQTGTGK 95
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 70.1 bits (164), Expect = 6e-11
Identities = 31/83 (37%), Positives = 51/83 (61%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFS 690
+V+ TPGR + L LD++ + + DEAD++ ++GF E +++I P RQT+LFS
Sbjct: 127 VVIGTPGRVIDHIKRGTLHLDSVTMFILDEADQMLDMGFREDIEDIFRDTPKDRQTILFS 186
Query: 691 ATLPKMLVEFARAGLSDPTLDKI 759
AT+P+ +++ R DP KI
Sbjct: 187 ATMPQPILDITRRFQRDPQFVKI 209
Score = 69.3 bits (162), Expect = 1e-10
Identities = 40/91 (43%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Frame = +2
Query: 233 IDRERCCSMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFV 412
+D + A+TG+GKTA F +PI+E+L P+NK N++AL+LSPTRELA+QT
Sbjct: 40 LDGKDVTGQAQTGTGKTAAFGIPIIERL-DPDNK-----NVQALVLSPTRELAIQTAEEF 93
Query: 413 RELGKF-TGLTSAAILGGESIEQQFNVMSGS 502
L K+ GL I GG+ IE+Q + G+
Sbjct: 94 SRLMKYKKGLNVVPIYGGQPIERQLRALKGT 124
Score = 38.7 bits (86), Expect = 0.17
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F +S +L+ I G+++PTPIQ IP L GKDV + G K
Sbjct: 7 FAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGK 55
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 70.1 bits (164), Expect = 6e-11
Identities = 33/85 (38%), Positives = 51/85 (60%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+I+V TPGR L L+L N++ VV DEAD + +GF E ++ I +P + QTLLF
Sbjct: 122 HIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLF 181
Query: 688 SATLPKMLVEFARAGLSDPTLDKIR 762
SAT+P + A +++P K++
Sbjct: 182 SATMPDPIRRIAERFMTEPQHIKVK 206
Score = 52.4 bits (120), Expect = 1e-05
Identities = 27/78 (34%), Positives = 48/78 (61%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TG+GKTA F LP+L+K+ T ++++ ++++PTRELA+Q + ++GK +
Sbjct: 46 AQTGTGKTAAFGLPLLDKV------DTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRV 99
Query: 440 TSAAILGGESIEQQFNVM 493
I GG+ I +Q +
Sbjct: 100 RILPIYGGQDINRQIRAL 117
Score = 46.4 bits (105), Expect = 8e-04
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F+ +GLS +L+ + G+++ TPIQ +TIP AL GKD++ + G K
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGK 52
>UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 2 SCAF15032, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 574
Score = 69.7 bits (163), Expect = 8e-11
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Frame = +1
Query: 508 NIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
NI+VATPGR L H+ N++ ++ DEADR+ E+GF E+L++I LP RQT+L
Sbjct: 185 NILVATPGRLLDHLQNTPGFMFKNLQCLIIDEADRILEVGFEEELKQIIKLLPKRRQTML 244
Query: 685 FSATLPKMLVEFARAGLSDPTL 750
FSAT + + + AR L L
Sbjct: 245 FSATQTRRVEDLARISLKKEPL 266
Score = 52.4 bits (120), Expect = 1e-05
Identities = 30/70 (42%), Positives = 41/70 (58%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TGSGKT F++P +E L+ K P +ILSPTRELA+QT ++EL
Sbjct: 105 AKTGSGKTLAFLIPCIE--LIYKLKFMPRNGTGVIILSPTRELAMQTYGVMKELMTHHVH 162
Query: 440 TSAAILGGES 469
T I+GG +
Sbjct: 163 TYGLIMGGSN 172
Score = 33.5 bits (73), Expect = 6.2
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +3
Query: 165 LKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
LKG+ + G++ T IQ KTI L G+DV+ + G K L
Sbjct: 73 LKGVKELGFEHMTEIQHKTIRPLLEGRDVLAAAKTGSGKTL 113
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 69.7 bits (163), Expect = 8e-11
Identities = 32/86 (37%), Positives = 54/86 (62%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
++IVVATPGR L + L N+ +V DEAD++ GF +++I P S+QT+L
Sbjct: 125 THIVVATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPGSKQTML 184
Query: 685 FSATLPKMLVEFARAGLSDPTLDKIR 762
FSAT+PK + + A+ + +P + +++
Sbjct: 185 FSATIPKDIKKLAKRYMDEPQMIQVQ 210
Score = 58.0 bits (134), Expect = 3e-07
Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQ-TLRFVRELGKFTG 436
A+TG+GKT FVLPILEK+ +++ALI++PTRELALQ T + L +
Sbjct: 49 AKTGTGKTLAFVLPILEKI------DPESSDVQALIVAPTRELALQITTEIKKMLVQRED 102
Query: 437 LTSAAILGGESIEQQFNVMSGSS 505
+ AI GG+ + QQ + G++
Sbjct: 103 INVLAIYGGQDVAQQLRKLKGNT 125
Score = 39.1 bits (87), Expect = 0.13
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
F +G+S + + G + TPIQ K IP+ L+GKD++ + G K L
Sbjct: 7 FLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTL 57
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 69.7 bits (163), Expect = 8e-11
Identities = 31/72 (43%), Positives = 49/72 (68%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+IVV TPGR + L LD++K++V DEADR+ ++GF + + ++ + PS RQTLLF
Sbjct: 125 HIVVGTPGRIQDHLRKQSLALDSLKVLVLDEADRMLDMGFTDAIDDVISYTPSDRQTLLF 184
Query: 688 SATLPKMLVEFA 723
SAT P+ + + +
Sbjct: 185 SATYPQEIEQIS 196
Score = 47.6 bits (108), Expect = 4e-04
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT-G 436
A+TGSGKTA F + +L++++V + +AL+L PTRELA Q + +R L +F
Sbjct: 48 AKTGSGKTAAFGIGLLDRIVVSD------FTTQALVLCPTRELADQVSKELRRLARFAQN 101
Query: 437 LTSAAILGGESIEQQFN 487
+ + GG+ + QQ +
Sbjct: 102 IKILTLCGGQPMGQQLD 118
Score = 37.1 bits (82), Expect = 0.51
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +3
Query: 123 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDV 251
S+ +F S+ L L + + GY + TP+Q T+P L+G DV
Sbjct: 2 STTSFSSLALPAEQLSNLNELGYTEMTPVQAATLPAVLSGADV 44
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 69.7 bits (163), Expect = 8e-11
Identities = 32/78 (41%), Positives = 49/78 (62%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFS 690
IVV TPGR + + + L+LD +K+ V DEAD + +GF E ++ I +P++ Q LFS
Sbjct: 130 IVVGTPGRLIDLLNKNVLQLDGLKVGVLDEADEMLNMGFIEDIETILKAVPNTAQRALFS 189
Query: 691 ATLPKMLVEFARAGLSDP 744
AT+P + + A+ L DP
Sbjct: 190 ATMPNAIRKLAKTFLKDP 207
Score = 42.7 bits (96), Expect = 0.010
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVREL-GKFTG 436
A+TG+GKTA F LP L K+ K + L+++PTRELA+Q + K G
Sbjct: 52 AQTGTGKTAAFGLPALAKI------DASVKQTQVLVVTPTRELAIQVAEALEGFAAKMRG 105
Query: 437 LTSAAILGGESIEQQFNVM 493
+ A + GG Q +
Sbjct: 106 VGVATVYGGAPFGPQVKAL 124
Score = 35.1 bits (77), Expect = 2.0
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+F M L VL+ + + PTPIQ + IP L G+DV+ + G K
Sbjct: 9 SFNDMALPSAVLEQLNAMQFLTPTPIQLQAIPALLEGQDVLGEAQTGTGK 58
>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 343
Score = 69.7 bits (163), Expect = 8e-11
Identities = 30/80 (37%), Positives = 51/80 (63%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
++IV+AT GR + E ++LD++++++ DE DR+ ++GF ++ I P RQTL
Sbjct: 121 TDIVIATVGRLMDFIKEKEIRLDSVEVLILDEVDRMLDMGFINDVKRIVGLCPKQRQTLF 180
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSAT+P + + AR L +P
Sbjct: 181 FSATIPPEIEDVARFALQNP 200
Score = 54.0 bits (124), Expect = 4e-06
Identities = 32/74 (43%), Positives = 41/74 (55%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TG+GKTA F LP+L +L PG R L+L PTREL Q R+ G+FT +
Sbjct: 45 AQTGTGKTAAFALPVLARL----GGHRPG-GPRVLVLEPTRELGAQVETAFRDFGRFTDV 99
Query: 440 TSAAILGGESIEQQ 481
S I GG +Q
Sbjct: 100 RSTIIHGGVGYGKQ 113
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F +GL +++G+ GY PTP+Q + IP+ L G+D+V + G K
Sbjct: 3 FSKLGLPSSLVRGVQAMGYVDPTPVQLRAIPVVLAGRDLVASAQTGTGK 51
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 69.7 bits (163), Expect = 8e-11
Identities = 33/83 (39%), Positives = 52/83 (62%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFS 690
+V+ATPGR L + + L ++++V DEADR+ ++GF LQ I LP +RQ LLFS
Sbjct: 149 LVIATPGRLLDHVQQKSINLGQVQVLVLDEADRMLDMGFLPDLQRIINLLPKTRQNLLFS 208
Query: 691 ATLPKMLVEFARAGLSDPTLDKI 759
AT + + A++ + PTL ++
Sbjct: 209 ATFSPEIQKLAKSFMVSPTLIEV 231
Score = 63.3 bits (147), Expect = 7e-09
Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLL-VPNNKPTPGKN-LRALILSPTRELALQTLRFVRELGKFT 433
A+TG+GKTA F LPIL +L+ + +P ++ +RALIL+PTRELA Q V KFT
Sbjct: 64 AQTGTGKTAGFSLPILNRLMPLATENTSPARHPVRALILTPTRELADQVAANVHTYAKFT 123
Query: 434 GLTSAAILGGESIEQQFNVM 493
L S + GG I Q +
Sbjct: 124 PLRSTVVYGGVDINPQIQTL 143
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/49 (42%), Positives = 27/49 (55%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F L + K I +GY QPTPIQ K IP+ +TG DV+ + G K
Sbjct: 22 FADFALHPDIQKAIDAQGYTQPTPIQAKAIPVVMTGVDVMGAAQTGTGK 70
>UniRef50_Q015I7 Cluster: ATP-dependent RNA helicase; n=2;
Ostreococcus|Rep: ATP-dependent RNA helicase -
Ostreococcus tauri
Length = 637
Score = 69.7 bits (163), Expect = 8e-11
Identities = 38/80 (47%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS---RQTL 681
+V+ TPGR + LKLD KI+V DEADR+ LGF EQL +I LP++ RQTL
Sbjct: 236 LVIGTPGRLNAVLESGALKLDRCKILVLDEADRMLALGFEEQLLKIRDALPNANDGRQTL 295
Query: 682 LFSATLPKMLVEFARAGLSD 741
LFSAT PK + +++ L +
Sbjct: 296 LFSATFPKAVRTISKSWLGE 315
Score = 48.4 bits (110), Expect = 2e-04
Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Frame = +2
Query: 254 SMARTGSGKTACFVLPILEKLLVP-NNKPTPGKNL----RALILSPTRELALQTLRFVRE 418
++A GSGKT F+LP +E L P GK AL+++PTREL LQ +
Sbjct: 143 AIAPPGSGKTLGFLLPAIEVALRDLRENPNAGKKYPGSPAALVVAPTRELTLQISTVCNK 202
Query: 419 LGKFTGLTSAAILGGESIEQQ 481
L K + S A+ GG S E Q
Sbjct: 203 LKKAVPVRSVAVYGGVSQEDQ 223
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 69.7 bits (163), Expect = 8e-11
Identities = 32/79 (40%), Positives = 51/79 (64%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+++VATPGR L + + +KLD ++I+V DEADR+ ++GF ++ + +LP+ RQ LLF
Sbjct: 127 DVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLF 186
Query: 688 SATLPKMLVEFARAGLSDP 744
SAT + A L +P
Sbjct: 187 SATFSDDIKALAEKLLHNP 205
Score = 64.9 bits (151), Expect = 2e-09
Identities = 34/80 (42%), Positives = 47/80 (58%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TG+GKTA F LP+L+ L+ + +RALIL+PTRELA Q VR+ K+ +
Sbjct: 45 AQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNI 104
Query: 440 TSAAILGGESIEQQFNVMSG 499
S + GG SI Q + G
Sbjct: 105 RSLVVFGGVSINPQMMKLRG 124
Score = 50.8 bits (116), Expect = 4e-05
Identities = 20/50 (40%), Positives = 35/50 (70%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+F S+GLS +L+ + ++GY++PTPIQ++ IP L G+D++ + G K
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGK 51
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 69.7 bits (163), Expect = 8e-11
Identities = 32/88 (36%), Positives = 52/88 (59%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
+ +VV TPGR L L L ++ +V DEAD + +GF + ++ + A LP + QT L
Sbjct: 125 AQVVVGTPGRILDHIRRGTLNLSELRFIVLDEADEMLRMGFIDDVETVMAELPENHQTAL 184
Query: 685 FSATLPKMLVEFARAGLSDPTLDKIRVD 768
FSAT+P+ + + ++DP KI+V+
Sbjct: 185 FSATMPEPIRRITKRFMNDPQEVKIKVN 212
Score = 45.2 bits (102), Expect = 0.002
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT- 433
MA+TGSGKTA F LP+L ++ P+ K+ + L+++PTRELA+Q K+
Sbjct: 48 MAQTGSGKTAAFALPLLAQI-----DPSE-KHPQMLVMAPTRELAIQVADACELFVKYAQ 101
Query: 434 GLTSAAILGGESIEQQFNVM 493
G + GG+ + Q +
Sbjct: 102 GTRIVTLYGGQRYDIQLRAL 121
Score = 39.9 bits (89), Expect = 0.072
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F +GL +LK ++ G++ P+PIQ+ IP L G DV+ + G K
Sbjct: 7 FNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGK 55
>UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX10;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX10 - Homo sapiens (Human)
Length = 875
Score = 69.7 bits (163), Expect = 8e-11
Identities = 36/97 (37%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Frame = +1
Query: 508 NIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
NI+V TPGR L H+ + +++++V DEADR+ ++GF + + + LP RQTLL
Sbjct: 192 NILVCTPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQTLL 251
Query: 685 FSATLPKMLVEFARAGLSDPTLDKI--RVDWKLPSTL 789
FSAT K + + AR L +P + + + P+TL
Sbjct: 252 FSATQTKSVKDLARLSLKNPEYVWVHEKAKYSTPATL 288
Score = 62.1 bits (144), Expect = 2e-08
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TGSGKT F++P+LE L T G L LI+SPTRELA QT +R++GK
Sbjct: 113 AKTGSGKTLAFLVPVLEALYRLQWTSTDG--LGVLIISPTRELAYQTFEVLRKVGKNHDF 170
Query: 440 TSAAILGGESIEQQFNVMSG-----SSPT*LLQHL 529
++ I+GG+ ++ + ++ +P LLQH+
Sbjct: 171 SAGLIIGGKDLKHEAERINNINILVCTPGRLLQHM 205
Score = 38.7 bits (86), Expect = 0.17
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
F LS LKG+ + Y+ T IQ++TI +AL GKDV+ + G K L
Sbjct: 71 FSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTL 121
>UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|Rep:
MGC114699 protein - Xenopus laevis (African clawed frog)
Length = 758
Score = 69.3 bits (162), Expect = 1e-10
Identities = 41/109 (37%), Positives = 63/109 (57%), Gaps = 6/109 (5%)
Frame = +2
Query: 251 CSMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF 430
C+ A TG+GKTA F+LP+LE+L+ KP R L+L PTREL +Q R+L +F
Sbjct: 222 CACAATGTGKTAAFMLPVLERLIY---KPREAPVTRVLVLVPTRELGIQVHAVTRQLAQF 278
Query: 431 TGLTSAAILGGESIE-QQFNVMSG-----SSPT*LLQHLGASYTSALRC 559
T +T+ +GG ++ Q+ + SG ++P L+ HL + +L C
Sbjct: 279 TEVTTCLAVGGLDVKTQEAALRSGPDVLIATPGRLIDHLHNCPSFSLNC 327
Score = 59.3 bits (137), Expect = 1e-07
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Frame = +1
Query: 508 NIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
++++ATPGR + H+ L+ I++++ DEADR+ + F EQ++EI RQTLL
Sbjct: 304 DVLIATPGRLIDHLHNCPSFSLNCIEVLILDEADRMLDEYFEEQMKEIIRLCSHQRQTLL 363
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSAT+ + + + A L +P
Sbjct: 364 FSATMSEEVKDLASVSLRNP 383
Score = 50.8 bits (116), Expect = 4e-05
Identities = 24/73 (32%), Positives = 35/73 (47%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQLVXXXXXXRN 314
FQ M LS P+LK I+ + QPTPIQ+ IP+ L GKD+ G K
Sbjct: 183 FQDMNLSRPLLKAISAMSFTQPTPIQKACIPVGLLGKDICACAATGTGKTAAFMLPVLER 242
Query: 315 FLFRTTNLHLERI 353
+++ + R+
Sbjct: 243 LIYKPREAPVTRV 255
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 69.3 bits (162), Expect = 1e-10
Identities = 32/79 (40%), Positives = 52/79 (65%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+++VA PGR L + + + L ++I+V DEADR+ ++GF ++++ ARLP+ RQ LLF
Sbjct: 131 DVLVACPGRLLDLAGQGSVDLSRVEILVLDEADRMLDMGFIHDVKKVLARLPAKRQNLLF 190
Query: 688 SATLPKMLVEFARAGLSDP 744
SAT K + + A L +P
Sbjct: 191 SATFSKDITDLADKLLHNP 209
Score = 51.6 bits (118), Expect = 2e-05
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLV---PNNKPTPG-KNLRALILSPTRELALQTLRFVRELGK 427
A+TG+GKT F LPILE+L P+ G + R L+L+PTRELA Q + +
Sbjct: 45 AQTGTGKTGGFALPILERLFPGGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKVYAR 104
Query: 428 FTGLTSAAILGGESIEQQFNVMS 496
SA I GG + Q M+
Sbjct: 105 DLNFISACIFGGVGMNPQVQAMA 127
Score = 46.8 bits (106), Expect = 6e-04
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+F S+GLS +++ I GY QPTP+Q++ IP L G+D++ + G K
Sbjct: 2 SFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGK 51
>UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3;
Sphingobacteriales|Rep: DEAD box-related helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 437
Score = 69.3 bits (162), Expect = 1e-10
Identities = 33/80 (41%), Positives = 49/80 (61%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
+NIV+ATPGR L L IK +V DEADR+ ++GF + + + + LP+ RQT++
Sbjct: 124 ANIVIATPGRLLAQLQSGTANLKQIKHLVLDEADRMLDMGFYDDIVRVISYLPTERQTIM 183
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSAT+P + A + DP
Sbjct: 184 FSATMPTKMRALANKLMKDP 203
Score = 52.8 bits (121), Expect = 1e-05
Identities = 28/68 (41%), Positives = 42/68 (61%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TG+GKTA ++LPIL K++ N +L L+L PTRELA+Q + + F +
Sbjct: 45 AQTGTGKTAAYMLPILHKIIESNT-----DSLDTLVLVPTRELAIQIDQQIEGFSYFINV 99
Query: 440 TSAAILGG 463
+S A+ GG
Sbjct: 100 SSIAVYGG 107
Score = 35.9 bits (79), Expect = 1.2
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F + +L ++ G+ +PTPIQ + IP+ ++ D+V + G K
Sbjct: 3 FNDFNFNSGLLDSLSSMGFNKPTPIQTEAIPVIMSNSDLVACAQTGTGK 51
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 69.3 bits (162), Expect = 1e-10
Identities = 31/79 (39%), Positives = 53/79 (67%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+++VATPGR L + + +K + ++I+V DEADR+ ++GF +++I A LP+ RQ L+F
Sbjct: 125 DVLVATPGRLLDLVQQNVVKFNQLEILVLDEADRMLDMGFIRDIKKILALLPAKRQNLMF 184
Query: 688 SATLPKMLVEFARAGLSDP 744
SAT + E A+ ++ P
Sbjct: 185 SATFSDEIRELAKGLVNQP 203
Score = 67.3 bits (157), Expect = 4e-10
Identities = 38/74 (51%), Positives = 47/74 (63%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TG+GKTA F LP+LE LL NK G+ +RAL+L+PTRELA Q V GK+ L
Sbjct: 45 AQTGTGKTAGFTLPLLE-LLSKGNKAKAGQ-IRALVLTPTRELAAQVSESVETYGKYLPL 102
Query: 440 TSAAILGGESIEQQ 481
SA + GG I Q
Sbjct: 103 RSAVVFGGVPINPQ 116
Score = 56.4 bits (130), Expect = 8e-07
Identities = 24/50 (48%), Positives = 34/50 (68%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+F S+GLS P+ K +T++GY P+PIQ + IP LTGKDV+ + G K
Sbjct: 2 SFSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGK 51
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 69.3 bits (162), Expect = 1e-10
Identities = 33/80 (41%), Positives = 50/80 (62%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG 436
+A+TG+GKTA F LP+L L+ KPT + +ALILSPTRELA+Q + +L + T
Sbjct: 47 IAQTGTGKTAAFALPLLHHLMTVGGKPTT-RTTKALILSPTRELAVQIAESIADLSEGTP 105
Query: 437 LTSAAILGGESIEQQFNVMS 496
++ + GG S+ Q ++
Sbjct: 106 ISHCVVFGGVSVRPQIQALA 125
Score = 67.3 bits (157), Expect = 4e-10
Identities = 28/79 (35%), Positives = 52/79 (65%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+I+VATPGR L + + + L + ++ DEADR+ ++GF + +I + P RQ+++F
Sbjct: 129 DILVATPGRLLDLMEQRAIDLRETRHLILDEADRMLDMGFVRDVMKIVGKCPDDRQSMMF 188
Query: 688 SATLPKMLVEFARAGLSDP 744
SAT+PK + + ++ L++P
Sbjct: 189 SATMPKPIEDLSKKILTNP 207
Score = 39.5 bits (88), Expect = 0.095
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +3
Query: 123 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+S F GL+ P+ + + + PTPIQ + IP AL G+D++ + G K
Sbjct: 2 TSTTFDGFGLAEPLTRALARLELTTPTPIQERAIPHALAGRDMLGIAQTGTGK 54
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 69.3 bits (162), Expect = 1e-10
Identities = 41/98 (41%), Positives = 60/98 (61%), Gaps = 6/98 (6%)
Frame = +2
Query: 254 SMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT 433
+ A+TG+GKT F+LPILE++ V KPT ++ALI++PTRELA+Q ++L +
Sbjct: 45 AQAQTGTGKTLAFILPILERVNV--EKPT----IQALIITPTRELAIQITAETKKLAEVK 98
Query: 434 GLTSAAILGGESIEQQFNVMSGS------SPT*LLQHL 529
G+ A GG+ +EQQ + GS +P LL HL
Sbjct: 99 GINILAAYGGQDVEQQLRKLKGSIHIIIGTPGRLLDHL 136
Score = 61.7 bits (143), Expect = 2e-08
Identities = 26/79 (32%), Positives = 44/79 (55%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+I++ TPGR L + L + ++V DEAD++ +GF +++I +P RQ + F
Sbjct: 123 HIIIGTPGRLLDHLRRKTINLGKLSMLVLDEADQMLHMGFLRDVEDIMTHIPKRRQNMFF 182
Query: 688 SATLPKMLVEFARAGLSDP 744
SAT+P + A + DP
Sbjct: 183 SATMPNQVRTLAEQYMKDP 201
Score = 33.5 bits (73), Expect = 6.2
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
F +G+S + + K +PTP+Q + IP L +DV+ + G K L
Sbjct: 5 FAKLGISEEIENVLNKSDITEPTPVQLQAIPPLLAQRDVMAQAQTGTGKTL 55
>UniRef50_A1WB42 Cluster: DEAD/DEAH box helicase domain protein;
n=9; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Acidovorax sp. (strain JS42)
Length = 625
Score = 69.3 bits (162), Expect = 1e-10
Identities = 35/90 (38%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
+N+VVATPGR L + +KLD ++ +V DEADR+ +LGF + L EI +QT++
Sbjct: 204 ANLVVATPGRLLDLQRSQQIKLDQVQFLVVDEADRMLDLGFSDDLAEINQLTAQRKQTMM 263
Query: 685 FSATLPKMLVEFARAGLSD--PTLDKIRVD 768
FSAT + + A + D ++ KI++D
Sbjct: 264 FSATFAPRIQQLAMRVMHDNGASVKKIQID 293
Score = 31.1 bits (67), Expect(2) = 0.020
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLL 319
++TGSGKTA F+LP+L L+
Sbjct: 87 SQTGSGKTAAFLLPVLHTLI 106
Score = 29.9 bits (64), Expect(2) = 0.020
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
Frame = +2
Query: 323 PNNK-PTPGKNLRA-----LILSPTRELALQTLRFVRELGKF-TGLTSAAILGGESIEQQ 481
P K PT +N +A L+L PTRELA Q +L K GL A ++GG + Q
Sbjct: 138 PKRKNPTQARNFKAATPGALVLCPTRELAQQVAHDAIDLVKHCKGLRIANVVGGMPYQLQ 197
>UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Putative RNA helicase; n=3; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Putative RNA helicase - Dictyostelium
discoideum (Slime mold)
Length = 1151
Score = 69.3 bits (162), Expect = 1e-10
Identities = 36/75 (48%), Positives = 48/75 (64%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG 436
+ARTGSGKT F+LP+ +L K PG+ + ALI+SPTRELALQ ++ K G
Sbjct: 552 IARTGSGKTLAFLLPMFRHILA-QPKSAPGEGMIALIMSPTRELALQIHVECKKFSKVLG 610
Query: 437 LTSAAILGGESIEQQ 481
L +A + GG SI +Q
Sbjct: 611 LRTACVYGGASISEQ 625
Score = 63.3 bits (147), Expect = 7e-09
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVF---DEADRLFELGFGEQLQEICARLPSSRQ 675
++IVV TPGR + I ++ N++ V F DEADR+F++GFG Q+ I + RQ
Sbjct: 633 ADIVVCTPGRMIDILCANNRRITNLRRVTFLVLDEADRMFDMGFGPQINCIVDSIRPDRQ 692
Query: 676 TLLFSATLPKMLVEFARAGLSDP 744
T++FSAT P + A+ L+ P
Sbjct: 693 TIMFSATFPPKVENVAKKILNKP 715
Score = 33.9 bits (74), Expect = 4.7
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +3
Query: 147 GLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQLVXXXXXXRNFL 320
GL+ V + K Y++PT IQ +TIP + G+D++ G K L R+ L
Sbjct: 515 GLTEKVHLLLKKFQYEKPTSIQAQTIPAIMNGRDLIGIARTGSGKTLAFLLPMFRHIL 572
>UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containing
protein; n=1; Babesia bovis|Rep: DEAD/DEAH box helicase
domain containing protein - Babesia bovis
Length = 649
Score = 69.3 bits (162), Expect = 1e-10
Identities = 37/79 (46%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Frame = +1
Query: 511 IVVATPGRFLHICIEM-CLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
IV ATPG+ L I + C+ +D I+IVV DEADRL +LGF ++L I RQT+LF
Sbjct: 262 IVFATPGKVLDIMLNSNCIHMDAIEIVVLDEADRLLDLGFKDELAHILQLCNKERQTMLF 321
Query: 688 SATLPKMLVEFARAGLSDP 744
SATL + E L +P
Sbjct: 322 SATLTEATKELVPVALVNP 340
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+ +GLS ++K + GYK P+ IQ K IP+AL GKD++ E G K
Sbjct: 127 WSDLGLSRSLIKAVFDMGYKAPSIIQSKVIPVALEGKDLLATAETGSGK 175
Score = 41.9 bits (94), Expect = 0.018
Identities = 33/84 (39%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLL---VPNNKP---TPGKNLR----ALILSPTRELALQTLRF 409
A TGSGK+A F++P L++L+ V K T G N R ALIL PTRELA Q
Sbjct: 169 AETGSGKSAAFLIPTLQRLITAGVIKQKDVDLTRGGNQRVGTKALILLPTRELAAQCYDV 228
Query: 410 VRELGKFTGLTSAAILGGESIEQQ 481
L + I GG +++Q
Sbjct: 229 FLALTQNLTQNGVLITGGVPVKEQ 252
>UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_85,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 957
Score = 69.3 bits (162), Expect = 1e-10
Identities = 31/84 (36%), Positives = 54/84 (64%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+++VATPGR + + E + L+ I +++ DEADR+ ++GF Q+++I + + RQT+L
Sbjct: 201 HVIVATPGRLIELIDEGMVNLNKITMLILDEADRMLDMGFEPQVRDIVSTIREDRQTILL 260
Query: 688 SATLPKMLVEFARAGLSDPTLDKI 759
SAT P + + ++ DP L KI
Sbjct: 261 SATWPNEVQQLSKEFCYDPILVKI 284
Score = 35.5 bits (78), Expect = 1.5
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Frame = +2
Query: 254 SMARTGSGKTACFVLPI---LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELG 424
++A+TGSGKT ++LP LE+ + P P + LIL PTREL +Q + +L
Sbjct: 101 AIAQTGSGKTLAYLLPALVHLEQHAMIMESPQP----KLLILVPTRELGVQIYDQLLQLI 156
Query: 425 KF 430
+F
Sbjct: 157 EF 158
>UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_146,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 564
Score = 69.3 bits (162), Expect = 1e-10
Identities = 35/91 (38%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Frame = +1
Query: 502 FSNIVVATPGRFLHICIEMC-LKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQT 678
+ +I++ATPGR + + L++ NI+I+VFDEADRL E+GF +++++I RQT
Sbjct: 236 YPDIIIATPGRTVDLLTNSSSLEIQNIEILVFDEADRLMEMGFEKEIRQILQATSKDRQT 295
Query: 679 LLFSATLPKMLVEFARAGLSDPTLDKIRVDW 771
+L SATL + + + L++P K+ VD+
Sbjct: 296 VLISATLNATVKQLSLLALNNPI--KVNVDF 324
Score = 57.6 bits (133), Expect = 3e-07
Identities = 31/72 (43%), Positives = 44/72 (61%)
Frame = +2
Query: 266 TGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTS 445
TGSGKTA F+LPI+++ N + +ALI+ PTRELALQ +L K+ T+
Sbjct: 162 TGSGKTAAFLLPIMQRFGNLKNL----QYSKALIILPTRELALQCFEMFEKLNKYANCTA 217
Query: 446 AAILGGESIEQQ 481
A ++G I+QQ
Sbjct: 218 ALVIGAVPIQQQ 229
Score = 37.1 bits (82), Expect = 0.51
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVV 254
F + L+ ++K +GY PT +Q K IPI + GKDV+
Sbjct: 118 FHQLKLNKALVKACHDQGYTHPTNVQAKIIPIIMNGKDVL 157
>UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;
Coelomata|Rep: ATP-dependent RNA helicase DDX18 - Homo
sapiens (Human)
Length = 670
Score = 69.3 bits (162), Expect = 1e-10
Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Frame = +1
Query: 508 NIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
NI+VATPGR L H+ N++ +V DEADR+ ++GF E+L++I LP+ RQT+L
Sbjct: 303 NIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTML 362
Query: 685 FSATLPKMLVEFARAGLSDPTL 750
FSAT + + + AR L L
Sbjct: 363 FSATQTRKVEDLARISLKKEPL 384
Score = 52.8 bits (121), Expect = 1e-05
Identities = 30/70 (42%), Positives = 42/70 (60%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TGSGKT F++P +E ++ P G + LILSPTRELA+QT ++EL
Sbjct: 223 AKTGSGKTLAFLIPAVELIVKLRFMPRNGTGV--LILSPTRELAMQTFGVLKELMTHHVH 280
Query: 440 TSAAILGGES 469
T I+GG +
Sbjct: 281 TYGLIMGGSN 290
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/79 (40%), Positives = 48/79 (60%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
++V+ TPGR L L L +++VV DEAD + ++GF E +++I P+ RQTLLF
Sbjct: 126 DVVIGTPGRILDHLGRSTLDLSQVRMVVLDEADEMLDMGFIEDIEKILQNTPAERQTLLF 185
Query: 688 SATLPKMLVEFARAGLSDP 744
SAT+P + A + DP
Sbjct: 186 SATMPPEIRRLAGRYMRDP 204
Score = 65.3 bits (152), Expect = 2e-09
Identities = 41/100 (41%), Positives = 64/100 (64%), Gaps = 7/100 (7%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TG+GKTA F +PI+E+L VP + ++AL+L+PTRELA+Q + ++G+ +
Sbjct: 50 AQTGTGKTAAFGVPIVERL-VPGQRA-----VQALVLTPTRELAIQVAEEITKIGRHARV 103
Query: 440 TSAAILGGESIEQQF-------NVMSGSSPT*LLQHLGAS 538
+ AI GG+SIE+Q +V+ G +P +L HLG S
Sbjct: 104 KTIAIYGGQSIERQIRSLRFGVDVVIG-TPGRILDHLGRS 142
Score = 44.8 bits (101), Expect = 0.003
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F+ + LS VLK + G+++P+PIQ + IP L GKDV+ + G K
Sbjct: 8 FRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGK 56
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 68.9 bits (161), Expect = 1e-10
Identities = 33/79 (41%), Positives = 49/79 (62%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+++VATPGR L + + ++ D ++ +V DEADR+ +LGF +L + A LP+ RQTLLF
Sbjct: 126 DVLVATPGRLLDLNRQNAVQFDQVQTLVLDEADRMLDLGFARELNAVFAALPAQRQTLLF 185
Query: 688 SATLPKMLVEFARAGLSDP 744
SAT + A L P
Sbjct: 186 SATFSDDIRAMAATILRGP 204
Score = 55.2 bits (127), Expect = 2e-06
Identities = 33/74 (44%), Positives = 41/74 (55%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TG+GKTA F LP+L++L V + R L+L PTRELA Q L+ GK L
Sbjct: 45 AQTGTGKTAGFALPLLQRL-VQHGPAVSSNRARVLVLVPTRELAEQVLQSFIAYGKGLDL 103
Query: 440 TSAAILGGESIEQQ 481
A GG SI Q
Sbjct: 104 RFLAAYGGVSINPQ 117
Score = 46.8 bits (106), Expect = 6e-04
Identities = 21/50 (42%), Positives = 30/50 (60%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+F S+GL P+L+ + Y+ PTP+Q K IP L GKDV+ + G K
Sbjct: 2 SFASLGLIDPLLRNLQDLNYQAPTPVQAKAIPAVLGGKDVMAGAQTGTGK 51
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 68.9 bits (161), Expect = 1e-10
Identities = 29/80 (36%), Positives = 54/80 (67%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
++I++ATPGR + + + ++ D ++++V DEADR+ ++GF +++I A LP RQ LL
Sbjct: 128 ADILIATPGRMMDLYNQKAVRFDKLEVLVLDEADRMLDMGFIHDIKKILAILPKKRQNLL 187
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSAT + + A+ +++P
Sbjct: 188 FSATFSPEIRQLAKGLVNNP 207
Score = 60.5 bits (140), Expect = 5e-08
Identities = 33/74 (44%), Positives = 43/74 (58%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TG+GKTA F LP+LE L N + +RAL+L+PTRELA Q V+ G+ L
Sbjct: 49 AQTGTGKTAGFTLPLLEILSKGENAQS--NQVRALVLTPTRELAAQVAESVKNYGQHLSL 106
Query: 440 TSAAILGGESIEQQ 481
S + GG I Q
Sbjct: 107 KSTVVFGGVKINPQ 120
Score = 48.0 bits (109), Expect = 3e-04
Identities = 22/53 (41%), Positives = 33/53 (62%)
Frame = +3
Query: 123 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+S +F +GLS P+LK I +GY +P+ IQ + IP L G+DV+ + G K
Sbjct: 3 TSMSFNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGK 55
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 68.9 bits (161), Expect = 1e-10
Identities = 36/89 (40%), Positives = 51/89 (57%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+IVVATPGR L L L N +V+ DEADR+ ++GF + I +LP RQ+LLF
Sbjct: 124 DIVVATPGRLLDHVRRNNLTLANTSLVIIDEADRMLDMGFLPDINTIVRQLPKGRQSLLF 183
Query: 688 SATLPKMLVEFARAGLSDPTLDKIRVDWK 774
SAT P + E A +D + ++ + K
Sbjct: 184 SATCPPRIQELAATFQNDAVIVRVEPERK 212
Score = 54.4 bits (125), Expect = 3e-06
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +2
Query: 233 IDRERCCSMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFV 412
ID +A+TG+GKT F+LP+L K+ G RAL+LSPTRELA Q +
Sbjct: 36 IDGRDLLGIAQTGTGKTGGFLLPVLHKIAEGRRH---GIRNRALVLSPTRELATQIHQAA 92
Query: 413 RELGKFTGLTSAAILGG-ESIEQQFNV 490
++ K+ + ++GG + I Q+ N+
Sbjct: 93 KDYAKYLHTNAVLLVGGVDFIRQERNL 119
Score = 42.3 bits (95), Expect = 0.013
Identities = 17/49 (34%), Positives = 32/49 (65%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F+++GLS +L+ + G+ PTPIQ+++IP + G+D++ + G K
Sbjct: 3 FEALGLSPEILRALNDLGHASPTPIQKQSIPHVIDGRDLLGIAQTGTGK 51
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 68.9 bits (161), Expect = 1e-10
Identities = 30/79 (37%), Positives = 53/79 (67%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+++VATPGR L + + +K + ++++V DEADR+ ++GF +++I A LP+ RQ L+F
Sbjct: 125 DVLVATPGRLLDLEQQKAVKFNQLEVLVLDEADRMLDMGFIRDIKKILAMLPAKRQNLMF 184
Query: 688 SATLPKMLVEFARAGLSDP 744
SAT + E A+ ++ P
Sbjct: 185 SATFSDEIRELAKGLVNQP 203
Score = 67.3 bits (157), Expect = 4e-10
Identities = 38/74 (51%), Positives = 47/74 (63%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TG+GKTA F LP+LE LL NK G+ +RAL+L+PTRELA Q V GK+ L
Sbjct: 45 AQTGTGKTAGFTLPLLE-LLSKGNKAKAGQ-IRALVLTPTRELAAQVSESVETYGKYLPL 102
Query: 440 TSAAILGGESIEQQ 481
SA + GG I Q
Sbjct: 103 RSAVVFGGVPINPQ 116
Score = 55.6 bits (128), Expect = 1e-06
Identities = 24/50 (48%), Positives = 34/50 (68%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+F S+GLS P+ K +T++GY P+PIQ + IP LTGKDV+ + G K
Sbjct: 2 SFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGK 51
>UniRef50_Q012T2 Cluster: DEAD-box protein abstrakt; n=3;
Ostreococcus|Rep: DEAD-box protein abstrakt -
Ostreococcus tauri
Length = 1025
Score = 68.9 bits (161), Expect = 1e-10
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Frame = +1
Query: 511 IVVATPGRFLHICI-EMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
IV+ TPGR + E L L+ + ++V DEADR+ ++GF Q++ I P+SRQTLLF
Sbjct: 169 IVIGTPGRLTDLMSQEGVLSLEKLSVIVLDEADRMLDMGFEPQIKTIFGATPASRQTLLF 228
Query: 688 SATLPKMLVEFARAGLSDPTLDKIRV 765
SAT PK + + A L+ DK RV
Sbjct: 229 SATWPKSVRKLAACYLNQ---DKSRV 251
Score = 38.3 bits (85), Expect = 0.22
Identities = 26/85 (30%), Positives = 39/85 (45%)
Frame = +2
Query: 254 SMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT 433
++A+TGSGKT F + G + L+++PTRELA+Q + G
Sbjct: 95 AVAKTGSGKTLAF-----------HGMKKHG-GVEGLVVAPTRELAIQIQAECEKFGAER 142
Query: 434 GLTSAAILGGESIEQQFNVMSGSSP 508
G S + GG S +Q N + P
Sbjct: 143 GFHSVVVYGGASAYEQKNALRSKKP 167
>UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 630
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/79 (40%), Positives = 52/79 (65%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+IVVATPGR + + + L+ + +V DEADR+ ++GF ++++ I + RQTLLF
Sbjct: 324 HIVVATPGRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFEDEIKSIFYFFKAQRQTLLF 383
Query: 688 SATLPKMLVEFARAGLSDP 744
SAT+P+ + FA++ L P
Sbjct: 384 SATMPRKIQFFAKSALVKP 402
Score = 33.5 bits (73), Expect = 6.2
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNK-P-TPGKNLRALILSPTRELALQTLRFVREL 421
+A TGSGKT FVLP++ L K P + LI+ P+RELA Q + E+
Sbjct: 233 IASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLIIEM 289
>UniRef50_Q5CWJ4 Cluster: Drs1p, eIF4a-1-family RNA SFII helicase;
n=3; Cryptosporidium|Rep: Drs1p, eIF4a-1-family RNA SFII
helicase - Cryptosporidium parvum Iowa II
Length = 573
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/80 (40%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Frame = +1
Query: 508 NIVVATPGRFLHICIE-MCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
+IV+ATPGR L + + + ++L+ ++I++ DEADRL ++GF ++ EI +RQT+L
Sbjct: 167 HIVIATPGRILDMLLNTLSIQLELLEIIILDEADRLLDMGFRQECLEILKYSSRTRQTML 226
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSATL + + + A L++P
Sbjct: 227 FSATLSRSVTDLALLALNNP 246
Score = 53.2 bits (122), Expect = 7e-06
Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 11/89 (12%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLL----VPNNKPTP-GK-----NLRALILSPTRELALQTLRF 409
A TGSGKTA F+LP LE+LL V N++ + G+ + L+L P+RELA+Q
Sbjct: 74 AETGSGKTAAFLLPALERLLRSPYVRNSRVSSLGRVGGAVGTKVLVLLPSRELAMQCFGV 133
Query: 410 VRELGKFTG-LTSAAILGGESIEQQFNVM 493
+ L K+ +T A + GG +I+QQ ++
Sbjct: 134 LESLTKYCPVITRAVVTGGMNIQQQERIL 162
Score = 40.3 bits (90), Expect = 0.054
Identities = 18/49 (36%), Positives = 32/49 (65%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+ S+ LS P+LK ++ + + T IQ++ IP+AL+G+D++ E G K
Sbjct: 32 WSSLELSRPLLKALSDLNFVEATLIQKEVIPLALSGRDIMAEAETGSGK 80
>UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep:
LOC562123 protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 483
Score = 68.5 bits (160), Expect = 2e-10
Identities = 32/78 (41%), Positives = 49/78 (62%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFS 690
IV+ TPGR L I + ++LD+++ VV DEAD + ++GF +Q+ +I ++P QTLL S
Sbjct: 296 IVIGTPGRLLEILKQKAVQLDHVRTVVVDEADTMLKMGFQQQVLDILEQVPDDHQTLLTS 355
Query: 691 ATLPKMLVEFARAGLSDP 744
AT+P + A DP
Sbjct: 356 ATIPTGTQQLAERLTHDP 373
Score = 44.4 bits (100), Expect = 0.003
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGK-FTG 436
A TGSGKT F+LP++ + L + +P LIL+PTRELA+Q +EL +
Sbjct: 214 ADTGSGKTVAFLLPVVMRAL-QSESASPSCP-ACLILTPTRELAIQIEEQAKELMRGLPN 271
Query: 437 LTSAAILGGESIEQQFN 487
+ +A ++GG + Q +
Sbjct: 272 MGTALLVGGMPLPPQLH 288
Score = 40.7 bits (91), Expect = 0.041
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +3
Query: 156 FPVL--KGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
FP + K + GY+ PTP+Q + +P+ LTG+DV+ + G K
Sbjct: 177 FPTVLEKNLKVAGYEAPTPVQMQMVPVGLTGRDVIATADTGSGK 220
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 68.5 bits (160), Expect = 2e-10
Identities = 32/79 (40%), Positives = 50/79 (63%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+I++ATPGR + + + LKLD ++I V DEADR+ ++GF + +++I LP R L F
Sbjct: 129 DILIATPGRLMDLHGQKHLKLDRVEIFVLDEADRMLDMGFMQDIKKILPLLPQKRHNLFF 188
Query: 688 SATLPKMLVEFARAGLSDP 744
SAT+P + A L +P
Sbjct: 189 SATMPHEIQTLANRILVNP 207
Score = 60.1 bits (139), Expect = 6e-08
Identities = 34/81 (41%), Positives = 44/81 (54%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG 436
+A+TG+GKTA F LPIL+ L K P K+ R LIL+PTRELA+Q + K
Sbjct: 47 IAQTGTGKTAAFSLPILQNLSKHTRKIEP-KSPRCLILTPTRELAIQIHENIEAYSKHLN 105
Query: 437 LTSAAILGGESIEQQFNVMSG 499
+ A I GG Q + G
Sbjct: 106 MKHAVIFGGVGQNPQVRALQG 126
Score = 35.9 bits (79), Expect = 1.2
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F + L P+ + + GY+ PTPIQ IP+ L G D++ + G K
Sbjct: 6 FTDLPLIAPLQFSLKEAGYETPTPIQLAAIPVILEGHDLLGIAQTGTGK 54
>UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4;
Wolbachia|Rep: Superfamily II DNA/RNA helicase -
Wolbachia sp. subsp. Brugia malayi (strain TRS)
Length = 408
Score = 68.5 bits (160), Expect = 2e-10
Identities = 33/78 (42%), Positives = 47/78 (60%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFS 690
IV+ TPGR + L +N+ +V DE DR+F++GFG Q++ I LP RQ L+FS
Sbjct: 124 IVIGTPGRIIDHIERKTLITNNVSTLVLDEVDRMFDMGFGIQIEGIMKYLPKMRQNLMFS 183
Query: 691 ATLPKMLVEFARAGLSDP 744
ATLP +V+ A + P
Sbjct: 184 ATLPGDIVKLAEKYSNQP 201
Score = 49.6 bits (113), Expect = 9e-05
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQ-TLRFVRELGKFTG 436
A+TG+GKT F +P++ KLL N T AL++ PTRELA Q T + L K +
Sbjct: 46 AQTGTGKTLAFAIPLIAKLLGEPNAST------ALVIVPTRELAQQVTNEIGKLLLKNSV 99
Query: 437 LTSAAILGGESIEQQFN 487
L A ++GGE I +Q N
Sbjct: 100 LKIALLIGGEPIFRQLN 116
Score = 44.0 bits (99), Expect = 0.004
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
+F MGL + + + K + PTP+Q + IP+AL GKD++ + G K L
Sbjct: 3 SFYEMGLPLLLAQALDKNSFSVPTPVQAQAIPLALKGKDILGSAQTGTGKTL 54
>UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;
n=1; uncultured marine bacterium 66A03|Rep: Putative
cold-shock dead-box protein A - uncultured marine
bacterium 66A03
Length = 659
Score = 68.5 bits (160), Expect = 2e-10
Identities = 35/79 (44%), Positives = 48/79 (60%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
++IVV TPGR L+L +IK VV DEAD + ++GF E L I + P R+TLL
Sbjct: 125 AHIVVGTPGRLRDHIERGVLRLSDIKAVVLDEADEMLDMGFREDLTFILGKAPVERRTLL 184
Query: 685 FSATLPKMLVEFARAGLSD 741
FSAT+P +V+ A+ D
Sbjct: 185 FSATVPTQIVKLAKTYQKD 203
Score = 41.5 bits (93), Expect = 0.024
Identities = 27/68 (39%), Positives = 37/68 (54%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TGSGKT F + I LL + K A+I++PTRELALQ + + L T
Sbjct: 44 AQTGSGKTLAFGISIATTLLAEKMEFDRPKIPLAIIIAPTRELALQVRKELEWLYVRTKA 103
Query: 440 TSAAILGG 463
A+ +GG
Sbjct: 104 QFASCVGG 111
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 68.5 bits (160), Expect = 2e-10
Identities = 34/81 (41%), Positives = 47/81 (58%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
++VV TPGR + + L L IK +V DEAD + +GF + ++ I + P SRQT LF
Sbjct: 128 HVVVGTPGRVIDHLEKGSLDLSRIKTMVLDEADEMLRMGFIDDVETILQKTPESRQTALF 187
Query: 688 SATLPKMLVEFARAGLSDPTL 750
SAT+P + A L DP L
Sbjct: 188 SATMPSAIKRIATTYLRDPDL 208
Score = 50.4 bits (115), Expect = 5e-05
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLR-FVRELGKFTG 436
A+TG+GKTA F LPIL ++ + P +AL+L+PTRELA+Q F R G
Sbjct: 51 AQTGTGKTASFALPILARIDIKQTTP------QALVLAPTRELAIQVAEAFQRYATYIPG 104
Query: 437 LTSAAILGGESIEQQFNVM 493
I GG+S Q + +
Sbjct: 105 FHVLPIYGGQSYGAQLSAL 123
Score = 42.3 bits (95), Expect = 0.013
Identities = 19/49 (38%), Positives = 30/49 (61%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F + LS P+L+ + + GY+ P+PIQ TIP+ L +DV+ + G K
Sbjct: 9 FADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGK 57
>UniRef50_A6R918 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 638
Score = 68.5 bits (160), Expect = 2e-10
Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEM---CLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQT 678
N++V+TPGR L + C + + +++V DEADRL +LGF E LQ+I RLP R+T
Sbjct: 141 NVLVSTPGRLLELLSSPHAHCSQ-SSFEVLVLDEADRLLDLGFKEDLQKILQRLPKQRRT 199
Query: 679 LLFSATLPKMLVEFARAGLSDPTLDKIRV 765
LFSA++ + + + R GL +P ++V
Sbjct: 200 GLFSASVSEAVDQIIRVGLRNPVKIAVKV 228
Score = 48.4 bits (110), Expect = 2e-04
Identities = 26/65 (40%), Positives = 40/65 (61%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A TGSGKT F++P++E+LL P ++ A+++SPTRELA Q + L F G
Sbjct: 27 AVTGSGKTLAFLIPVVERLL-RLESPIKKHHIGAILISPTRELATQIYNVLLSLLAFHGP 85
Query: 440 TSAAI 454
++A +
Sbjct: 86 SAARL 90
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 68.5 bits (160), Expect = 2e-10
Identities = 29/78 (37%), Positives = 49/78 (62%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFS 690
I++ TPGR + L LD + +VV DEAD++ ++GF E ++EI + +P RQT++ S
Sbjct: 126 IIIGTPGRVIDHIKRKTLLLDAVSLVVLDEADQMLDMGFREDIEEILSHIPKERQTVILS 185
Query: 691 ATLPKMLVEFARAGLSDP 744
AT P +++ +R +P
Sbjct: 186 ATFPPEILDISRRFQKNP 203
Score = 48.0 bits (109), Expect = 3e-04
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF-TG 436
A TG+GKTA F +P +E L P N +N++ ++L P+RELA+Q + +L G
Sbjct: 48 AYTGTGKTAAFGIPAIE-LCQPAN-----RNVQTIVLCPSRELAVQVGTELNKLAMHKKG 101
Query: 437 LTSAAILGGESIEQQFNVMS 496
++ + GG+ IE+Q +S
Sbjct: 102 ISILPVYGGQPIERQIKALS 121
Score = 42.7 bits (96), Expect = 0.010
Identities = 18/40 (45%), Positives = 27/40 (67%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDV 251
+F + LS ++K I GY++PTPIQ++ IP+ L G DV
Sbjct: 5 SFSDLQLSPGIIKAIRDIGYEEPTPIQQEVIPLILAGNDV 44
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 68.1 bits (159), Expect = 2e-10
Identities = 29/78 (37%), Positives = 50/78 (64%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFS 690
+V+ TPGR + L LD++ V+ DEAD + ++GF + ++ I ++ + RQTLLFS
Sbjct: 126 VVIGTPGRIIDHLRRKTLILDHVNTVILDEADEMLDMGFIDDIESILRQVKNERQTLLFS 185
Query: 691 ATLPKMLVEFARAGLSDP 744
AT+P + + +R ++DP
Sbjct: 186 ATMPPAIKKLSRKYMNDP 203
Score = 60.1 bits (139), Expect = 6e-08
Identities = 31/78 (39%), Positives = 51/78 (65%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TG+GKTA F +P++EK+ + G++++ALIL+PTRELA+Q +++L K +
Sbjct: 50 AQTGTGKTAAFGIPVVEKV-------STGRHVQALILTPTRELAIQVSGEIQKLSKHKKI 102
Query: 440 TSAAILGGESIEQQFNVM 493
+ I GG+SI Q +
Sbjct: 103 RTLPIYGGQSIVHQIKAL 120
Score = 39.1 bits (87), Expect = 0.13
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F + + + K I + G+++P+PIQ K IP L G DV+ + G K
Sbjct: 8 FNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGK 56
>UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=55; Lactobacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Enterococcus faecalis
(Streptococcus faecalis)
Length = 449
Score = 68.1 bits (159), Expect = 2e-10
Identities = 32/85 (37%), Positives = 50/85 (58%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
++V+ TPGR L + E LK+ V DEAD ++GF ++ +I RLP Q L+F
Sbjct: 125 HVVIGTPGRILDMMNEQALKVHTAFAFVVDEADMTLDMGFLAEVDQIAGRLPEKLQMLVF 184
Query: 688 SATLPKMLVEFARAGLSDPTLDKIR 762
SAT+P+ L F + L +P ++ I+
Sbjct: 185 SATIPEKLRPFLKKYLENPVIEHIK 209
Score = 44.8 bits (101), Expect = 0.003
Identities = 27/85 (31%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT-- 433
++TGSGKT F+LP+++K+ KPT + ++ +I +P+RELA Q + ++L +F+
Sbjct: 46 SQTGSGKTHTFLLPLMDKV-----KPTIDE-VQIVITAPSRELANQIYQEAQQLARFSQP 99
Query: 434 GLTSAAILGGESIEQQFNVMSGSSP 508
+ + +GG ++Q N + P
Sbjct: 100 EIRVSNFVGGTDKQRQLNKLKHQQP 124
Score = 33.9 bits (74), Expect = 4.7
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 168 KGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+ + ++G+++PT +Q K IPI GK V+ + G K
Sbjct: 15 EALAEKGFEEPTEVQEKLIPIIKKGKSVIGQSQTGSGK 52
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 68.1 bits (159), Expect = 2e-10
Identities = 30/79 (37%), Positives = 49/79 (62%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+I+VA PGR L + + L ++ +V DEAD++ ++GF + ++ I A LP R T+LF
Sbjct: 132 DIIVAAPGRLLDLIEQGLCDLSQLETLVLDEADQMLDMGFAKPIERIVATLPEDRHTVLF 191
Query: 688 SATLPKMLVEFARAGLSDP 744
SAT+PK + + L +P
Sbjct: 192 SATMPKSIAALVESLLRNP 210
Score = 52.0 bits (119), Expect = 2e-05
Identities = 28/79 (35%), Positives = 39/79 (49%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG 436
+A+TG+GKTA F LP+L + L +P P R L+L+PTREL Q +
Sbjct: 50 LAQTGTGKTASFALPLLHR-LAATPRPAPKNGARVLVLAPTRELVSQIADGFESFSRHQP 108
Query: 437 LTSAAILGGESIEQQFNVM 493
+ I GG S Q +
Sbjct: 109 VRVTTIFGGVSQVHQVKAL 127
Score = 43.6 bits (98), Expect = 0.006
Identities = 19/53 (35%), Positives = 34/53 (64%)
Frame = +3
Query: 123 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
S+ AF + L+ +L+ + + GY +PTPIQ ++IP+ L G+D++ + G K
Sbjct: 5 SAQAFADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLLGLAQTGTGK 57
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 68.1 bits (159), Expect = 2e-10
Identities = 33/85 (38%), Positives = 48/85 (56%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
+ +VV TPGR + LKLD +++ V DEAD + +GF E +Q I +P + Q L
Sbjct: 135 AQVVVGTPGRLMDHLRRKSLKLDELRVCVLDEADEMLNMGFLEDIQWILDHIPKTAQMCL 194
Query: 685 FSATLPKMLVEFARAGLSDPTLDKI 759
FSAT+P + + A L DP K+
Sbjct: 195 FSATMPPAIRKIANRFLKDPEHIKV 219
Score = 54.8 bits (126), Expect = 2e-06
Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGK-FTG 436
A+TG+GKTA F LP L K+ KP + ++L+PTRELA+Q + GK G
Sbjct: 59 AQTGTGKTAAFGLPALAKIDTSIKKP------QLMVLAPTRELAMQVAEAIESFGKDMKG 112
Query: 437 LTSAAILGGESIEQQF 484
L A + GG+S QF
Sbjct: 113 LRVATLYGGQSYGPQF 128
Score = 36.7 bits (81), Expect = 0.67
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
AF S+GL +L + G+ T IQ TIP L GKDV+ + G K
Sbjct: 16 AFASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTGK 65
>UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 749
Score = 68.1 bits (159), Expect = 2e-10
Identities = 34/79 (43%), Positives = 50/79 (63%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+I+VATPGR + + + LD +K++V DEADR+ ++GF ++ I P+ RQTLLF
Sbjct: 190 DILVATPGRLVDLIEQGACHLDEVKVLVLDEADRMLDMGFLPAVRRIVRETPAERQTLLF 249
Query: 688 SATLPKMLVEFARAGLSDP 744
SATL + V +SDP
Sbjct: 250 SATLDEEAVGEITDLVSDP 268
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
AF +GLS +L+ I GY PTP+Q +IP+ L G+D++ + G K
Sbjct: 47 AFDELGLSDEMLRAIENLGYTAPTPVQAGSIPVVLEGRDLLAAAQTGTGK 96
Score = 38.3 bits (85), Expect = 0.22
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 18/92 (19%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLL-VPNNKPTP---GKNLRA--------------LILSPTRE 385
A+TG+GKTA F+LP + L + KP G+N R L+++PTRE
Sbjct: 90 AQTGTGKTAAFLLPTMNNLEHIAPPKPVRERGGRNRRRGAKKPEGNGRGPVMLVITPTRE 149
Query: 386 LALQTLRFVRELGKFTGLTSAAILGGESIEQQ 481
LA Q ++ TG + ++GG S + Q
Sbjct: 150 LAQQIDEVAGKIADVTGHVAVTVVGGVSYKPQ 181
>UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 755
Score = 68.1 bits (159), Expect = 2e-10
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Frame = +1
Query: 511 IVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
IVVATPGR + H+ L+++ ++ DEADRL E+GF E+++EI + P RQTLLF
Sbjct: 273 IVVATPGRVIDHVRNTHSFGLEDLATLILDEADRLLEMGFLEEIKEIVRQCPKKRQTLLF 332
Query: 688 SATLPKMLVEFARAGLSDP 744
SATL + A + +P
Sbjct: 333 SATLTAGVEALASLSMKNP 351
Score = 63.7 bits (148), Expect = 5e-09
Identities = 33/77 (42%), Positives = 45/77 (58%)
Frame = +2
Query: 251 CSMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF 430
C A TGSGKTA F+LP LE++L + P P L+L PTRELA+Q + L +F
Sbjct: 189 CGRAVTGSGKTAAFMLPQLERML--HRGPRPAAATHVLVLVPTRELAVQVHQMTESLAQF 246
Query: 431 TGLTSAAILGGESIEQQ 481
T + + ++GG S Q
Sbjct: 247 TTIRAVLVVGGLSANVQ 263
Score = 47.6 bits (108), Expect = 4e-04
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDV 251
AF + LS P+ + GYK+PTPIQ IPIA+TG+DV
Sbjct: 149 AFDELHLSRPLTRACEALGYKKPTPIQAAVIPIAMTGRDV 188
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 68.1 bits (159), Expect = 2e-10
Identities = 31/74 (41%), Positives = 46/74 (62%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
+NI+V TPGR L + L D + V DEAD + ++GF E +++I LP RQ+ L
Sbjct: 120 ANIIVGTPGRTLDLIDRGILNFDKVSYFVLDEADEMLDMGFIEDIKKIINVLPVERQSFL 179
Query: 685 FSATLPKMLVEFAR 726
FSAT+P ++E A+
Sbjct: 180 FSATIPSEIIELAK 193
Score = 62.1 bits (144), Expect = 2e-08
Identities = 32/78 (41%), Positives = 48/78 (61%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
++TGSGKTA +++PI+ N K +RALIL PTRELA+Q + LGK +G+
Sbjct: 46 SKTGSGKTAAYLIPII-------NNTAKEKGIRALILLPTRELAVQVAKVSEALGKRSGI 98
Query: 440 TSAAILGGESIEQQFNVM 493
+ + GG SI +Q ++
Sbjct: 99 RTVVVYGGVSINKQIELI 116
Score = 38.3 bits (85), Expect = 0.22
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F+ L +++ I GY +PT +Q IPIAL G D+V + G K
Sbjct: 4 FEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAGSDLVVRSKTGSGK 52
>UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 53 - Arabidopsis thaliana (Mouse-ear cress)
Length = 616
Score = 68.1 bits (159), Expect = 2e-10
Identities = 30/85 (35%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
++ V TPGR + + L L ++ VV DEAD++ ++GF E ++ I +LP RQ+++F
Sbjct: 228 DVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEKRQSMMF 287
Query: 688 SATLPKMLVEFARAGLSDP-TLDKI 759
SAT+P + + L++P T+D +
Sbjct: 288 SATMPSWIRSLTKKYLNNPLTVDLV 312
Score = 57.2 bits (132), Expect = 4e-07
Identities = 32/74 (43%), Positives = 44/74 (59%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
ARTG+GKT F +PI++K++ N K G+N L+L+PTRELA Q + RE L
Sbjct: 148 ARTGTGKTLAFGIPIIDKIIKYNAKHGRGRNPLCLVLAPTRELARQVEKEFRE--SAPSL 205
Query: 440 TSAAILGGESIEQQ 481
+ + GG I QQ
Sbjct: 206 DTICLYGGTPIGQQ 219
>UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DRS1 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 808
Score = 68.1 bits (159), Expect = 2e-10
Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Frame = +1
Query: 508 NIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
+I++ATPGR + H+ L + ++V DEADR+ E GF ++L+EI P SRQT+L
Sbjct: 349 DILIATPGRLIDHLTNTPSFTLSALDVLVIDEADRMLEAGFTDELEEIIKACPRSRQTML 408
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSAT+ + E + L P
Sbjct: 409 FSATMTDSVDELVKLSLDKP 428
Score = 52.4 bits (120), Expect = 1e-05
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A TGSGKTA F++PILE+L ++ G R L+L PTRELA+Q + L + GL
Sbjct: 266 AVTGSGKTAAFMVPILERLCY-RDRGKGGAACRVLVLCPTRELAVQCEAVGKALAEKGGL 324
Query: 440 --TSAAILGGESIEQQFNVM 493
A ++GG S+ Q + +
Sbjct: 325 DVRFALLVGGLSLNAQAHTL 344
Score = 45.2 bits (102), Expect = 0.002
Identities = 18/41 (43%), Positives = 29/41 (70%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVV 254
+F +M LS P+L+ +T + PTPIQ + IP+AL G+D++
Sbjct: 223 SFTAMNLSRPLLRALTSLQFTAPTPIQARAIPLALLGRDIL 263
>UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=34; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX59 - Homo sapiens (Human)
Length = 619
Score = 68.1 bits (159), Expect = 2e-10
Identities = 31/78 (39%), Positives = 51/78 (65%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFS 690
+++ATPGR L I + ++L +KIVV DEAD + ++GF +Q+ +I +P+ QT+L S
Sbjct: 325 VIIATPGRLLDIIKQSSVELCGVKIVVVDEADTMLKMGFQQQVLDILENIPNDCQTILVS 384
Query: 691 ATLPKMLVEFARAGLSDP 744
AT+P + + A L +P
Sbjct: 385 ATIPTSIEQLASQLLHNP 402
Score = 49.2 bits (112), Expect = 1e-04
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVREL-GKFTG 436
A TGSGKTA F+LP++ + L + P+ ALIL+PTRELA+Q R +EL
Sbjct: 247 ADTGSGKTAAFLLPVIMRALFESKTPS------ALILTPTRELAIQIERQAKELMSGLPR 300
Query: 437 LTSAAILGGESIEQQ 481
+ + ++GG + Q
Sbjct: 301 MKTVLLVGGLPLPPQ 315
Score = 37.9 bits (84), Expect = 0.29
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F+ L + + K GY+ PTPIQ + IP+ L G+D++ + G K
Sbjct: 205 FEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGK 253
>UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=195;
cellular organisms|Rep: ATP-independent RNA helicase
dbpA - Escherichia coli (strain K12)
Length = 457
Score = 68.1 bits (159), Expect = 2e-10
Identities = 35/91 (38%), Positives = 53/91 (58%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+I+VATPGR L + + LD + +V DEADR+ ++GF + + ++ P+SRQTLLF
Sbjct: 124 HIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQTLLF 183
Query: 688 SATLPKMLVEFARAGLSDPTLDKIRVDWKLP 780
SAT P+ + + DP +I LP
Sbjct: 184 SATWPEAIAAISGRVQRDPLAIEIDSTDALP 214
Score = 39.9 bits (89), Expect = 0.072
Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TGSGKTA F L +L+++ +AL+L PTRELA Q +R L +F
Sbjct: 47 AKTGSGKTAAFGLGLLQQI------DASLFQTQALVLCPTRELADQVAGELRRLARFLPN 100
Query: 440 TSAAIL-GGESIEQQ 481
T L GG+ Q
Sbjct: 101 TKILTLCGGQPFGMQ 115
>UniRef50_UPI0001509DC1 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 926
Score = 67.7 bits (158), Expect = 3e-10
Identities = 34/79 (43%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = +1
Query: 508 NIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
N+++ TPGR L H+ N++++V DEAD + +LGF E L I LP SRQT+L
Sbjct: 206 NVLICTPGRLLQHMDETPDFDCTNLQMLVIDEADLILDLGFKEHLNAILLNLPKSRQTIL 265
Query: 685 FSATLPKMLVEFARAGLSD 741
FSATL K + E ++ L +
Sbjct: 266 FSATLSKSIHELSKLSLKN 284
Score = 55.6 bits (128), Expect = 1e-06
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
++TGSGKT +++P++E+L V P G L A+I+ PTRELA Q + L
Sbjct: 127 SKTGSGKTLSYLVPLVERLYVQKWNPLDG--LGAIIILPTRELATQVFEVFNSFTQNHDL 184
Query: 440 TSAAILGGESIEQQFNVMSG-----SSPT*LLQHL 529
+ I+GG++++ + M G +P LLQH+
Sbjct: 185 SVGLIIGGKNVKYEKEHMKGMNVLICTPGRLLQHM 219
Score = 37.1 bits (82), Expect = 0.51
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
F + +S+ + G+ KR + + T IQR TIP L G+DV+ + G K L
Sbjct: 85 FSDLPISYNTIFGLEKRKFIKMTEIQRCTIPHILAGRDVLAASKTGSGKTL 135
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 67.7 bits (158), Expect = 3e-10
Identities = 36/76 (47%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLV-PNNKPTPGKN-LRALILSPTRELALQTLRFVRELGKFT 433
A+TG+GKTA F LP+L +L N +P ++ +RALI++PTRELA+Q VR+ GK+
Sbjct: 49 AQTGTGKTAGFTLPLLYRLQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGKYL 108
Query: 434 GLTSAAILGGESIEQQ 481
L +A + GG +IE Q
Sbjct: 109 ALRTAVVFGGINIEPQ 124
Score = 59.3 bits (137), Expect = 1e-07
Identities = 29/78 (37%), Positives = 46/78 (58%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFS 690
I+VATPGR L + + + +I+V DEADR+ ++GF ++ + A L RQ+L+FS
Sbjct: 134 ILVATPGRLLDLVEQKAVNFSKTEILVLDEADRMLDMGFLPDIKRVMALLSPQRQSLMFS 193
Query: 691 ATLPKMLVEFARAGLSDP 744
AT + + A + L P
Sbjct: 194 ATFSGEIRKLADSLLKQP 211
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/49 (42%), Positives = 27/49 (55%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F +GLS +L + GY PTPIQ + IP L GKDV+ + G K
Sbjct: 7 FAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGK 55
>UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Lentisphaera araneosa HTCC2155|Rep: DEAD/DEAH box
helicase-like protein - Lentisphaera araneosa HTCC2155
Length = 412
Score = 67.7 bits (158), Expect = 3e-10
Identities = 29/77 (37%), Positives = 53/77 (68%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
++++ATPGR + + ++L +++++ DEAD++ +LGF ++L+E+ LP RQ LLF
Sbjct: 128 DVLIATPGRIIELINLGEVRLVELEMLILDEADKMLDLGFADELKELLEALPKKRQNLLF 187
Query: 688 SATLPKMLVEFARAGLS 738
SATLP+ + + A L+
Sbjct: 188 SATLPQKVQQLAEEFLN 204
Score = 48.4 bits (110), Expect = 2e-04
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKL--LVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT 433
++TG+GKT F P++E++ L P K ++ L+L PTRELALQ + +F+
Sbjct: 45 SQTGTGKTLAFSFPLIERINTLPPKKKKI---SILGLVLVPTRELALQVEKAFTNYAEFS 101
Query: 434 --GLTSAAILGGESIEQQ 481
+ +A ++GGE+I+ Q
Sbjct: 102 LRPIKTATLIGGENIDGQ 119
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 67.7 bits (158), Expect = 3e-10
Identities = 36/85 (42%), Positives = 53/85 (62%)
Frame = +2
Query: 227 NSIDRERCCSMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLR 406
+++D +A+TG+GKTA FVLPIL++L+ P +RA+I++PTRELA Q
Sbjct: 34 HALDGRDVIGIAQTGTGKTAAFVLPILQRLM-----RGPRGRVRAMIVTPTRELAEQIQG 88
Query: 407 FVRELGKFTGLTSAAILGGESIEQQ 481
+ LGK+TGL S + GG + Q
Sbjct: 89 VIEALGKYTGLRSVTLYGGVGYQGQ 113
Score = 63.7 bits (148), Expect = 5e-09
Identities = 30/78 (38%), Positives = 47/78 (60%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFS 690
I V PGR L L L+++ +++ DEAD++F++GF ++ I P+ RQT+LFS
Sbjct: 123 IAVVCPGRLLDHLERGTLTLEHLDMLILDEADQMFDMGFLPDVRRILRLAPAQRQTMLFS 182
Query: 691 ATLPKMLVEFARAGLSDP 744
AT+P + AR L +P
Sbjct: 183 ATMPDAIRALAREALREP 200
Score = 39.9 bits (89), Expect = 0.072
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+F S + GI GY PTPIQ + IP AL G+DV+ + G K
Sbjct: 2 SFDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGK 51
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 67.7 bits (158), Expect = 3e-10
Identities = 34/80 (42%), Positives = 47/80 (58%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
++IVVATPGR L + L I VV DEAD + +GF + + I A+ P R+ L
Sbjct: 129 THIVVATPGRLLDHIERRSIDLTGINAVVLDEADEMLRMGFIDDVDTILAKTPKERKVAL 188
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSAT+PK + + A LS+P
Sbjct: 189 FSATMPKRVRDIANKHLSNP 208
Score = 53.6 bits (123), Expect = 5e-06
Identities = 33/76 (43%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGK-FT 433
+A+TG+GKTA F LPIL + V P +AL+L PTRELA Q R G+
Sbjct: 52 LAQTGTGKTAAFALPILANIDVKVRSP------QALVLCPTRELAQQVAEAFRSYGRGMG 105
Query: 434 GLTSAAILGGESIEQQ 481
GL +I GG + QQ
Sbjct: 106 GLRILSIFGGADMRQQ 121
Score = 39.9 bits (89), Expect = 0.072
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F S+GL + + + GY+ TPIQ TIP+ L G+DVV + G K
Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGK 59
>UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1;
Ostreococcus tauri|Rep: DEAD-box protein abstrakt -
Ostreococcus tauri
Length = 1030
Score = 67.7 bits (158), Expect = 3e-10
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIK---IVVFDEADRLFELGFGEQLQEICARLPSSRQ 675
+ IV TPGR + I K+ N++ +V DEADR+F++GF Q+ I A L RQ
Sbjct: 454 AEIVACTPGRMIDILTTGGGKITNLRRVTYIVLDEADRMFDMGFEPQITRILANLRPDRQ 513
Query: 676 TLLFSATLPKMLVEFARAGLSDP 744
T++FSAT P + ARA L +P
Sbjct: 514 TVMFSATFPHTMEALARAALENP 536
Score = 51.2 bits (117), Expect = 3e-05
Identities = 26/78 (33%), Positives = 39/78 (50%)
Frame = +2
Query: 248 CCSMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGK 427
C +A+TGSGKT ++LP+L + G +I+ PTREL Q + + GK
Sbjct: 370 CIGIAKTGSGKTLAYILPMLRHINAQEPLKN-GDGPIGMIMGPTRELVTQIGKEAKRYGK 428
Query: 428 FTGLTSAAILGGESIEQQ 481
G + ++ GG I Q
Sbjct: 429 ALGFNAVSVYGGSGIAAQ 446
Score = 34.7 bits (76), Expect = 2.7
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +3
Query: 147 GLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
GLS + + I + G+++P PIQ + +P+ ++G+D + + G K L
Sbjct: 336 GLSGRIHELIRRCGFEKPMPIQAQALPVIMSGRDCIGIAKTGSGKTL 382
>UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 518
Score = 67.7 bits (158), Expect = 3e-10
Identities = 35/80 (43%), Positives = 46/80 (57%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
+ IVVATPGR + L + +VFDEADR+F++GF Q++ I + RQTLL
Sbjct: 230 AEIVVATPGRLIDHVKAKATNLHRVTYLVFDEADRMFDMGFEPQVRSIANNVRPDRQTLL 289
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSAT K + R L DP
Sbjct: 290 FSATFKKKVEHLCRDILVDP 309
Score = 46.0 bits (104), Expect = 0.001
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG 436
+A+TGSGKTA F+ P L ++ + G LI +PTREL Q R GK
Sbjct: 149 IAKTGSGKTAAFLWPALVHIM-DQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYN 207
Query: 437 LTSAAIL-GGESIEQQFNVMSG-----SSPT*LLQHLGASYTSALR 556
+ A+ GG EQ + G ++P L+ H+ A T+ R
Sbjct: 208 IHVVAVFGGGNKYEQSKALQEGAEIVVATPGRLIDHVKAKATNLHR 253
Score = 38.7 bits (86), Expect = 0.17
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+F G ++ I K Y QPT IQ + +PIAL+G+D++ + G K
Sbjct: 107 SFAHFGFDEQMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGK 156
>UniRef50_Q8SR01 Cluster: ATP-dependent RNA helicase DBP4; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DBP4 - Encephalitozoon cuniculi
Length = 452
Score = 67.7 bits (158), Expect = 3e-10
Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Frame = +1
Query: 508 NIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
NI+V TPGR L H+ L N++I++ DEAD++ E+GF E L++I +P +QTLL
Sbjct: 127 NILVCTPGRLLQHLQENPYLSTANVQILILDEADKMIEMGFKEVLEDILEYIPQKKQTLL 186
Query: 685 FSATLPKMLVEFAR-AGLSDPTLDKIRVDWKLPSTL 789
FSAT PK AR L DP + I + PS L
Sbjct: 187 FSAT-PK--ASTARILKLEDPRIISIYKEEGFPSQL 219
Score = 55.2 bits (127), Expect = 2e-06
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
++TG+GKT F++P L++L+ + G L L+++PTRELALQ + + K+T L
Sbjct: 48 SQTGTGKTLAFLVPTLQRLV--SLGWGGGDGLGCLVITPTRELALQIFDVLSRIAKYTVL 105
Query: 440 TSAAILGGESIE------QQFNVMSGSSPT*LLQHL 529
++ I+GG E Q N++ +P LLQHL
Sbjct: 106 STGLIMGGLEAEDELLKVNQMNILV-CTPGRLLQHL 140
Score = 35.1 bits (77), Expect = 2.0
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
F+ + + + KG+ + G+ +Q+K IP+AL G D++ + G K L
Sbjct: 6 FEDLKIDQRIEKGLRENGFVSMKEVQQKVIPMALEGHDIIGSSQTGTGKTL 56
>UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase;
n=1; Desulfotalea psychrophila|Rep: Related to
ATP-dependent RNA helicase - Desulfotalea psychrophila
Length = 498
Score = 67.3 bits (157), Expect = 4e-10
Identities = 30/78 (38%), Positives = 51/78 (65%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A TG+GKTA F++ ++ +LL + RALIL+PTREL +Q ++ ++LG++TG+
Sbjct: 138 ANTGTGKTAVFLVGVMARLLADKKGGLGKRTPRALILAPTRELVMQIVKDAKKLGRYTGV 197
Query: 440 TSAAILGGESIEQQFNVM 493
+ A+ GG E+Q ++
Sbjct: 198 NADAVYGGAEYEKQMELL 215
Score = 58.8 bits (136), Expect = 1e-07
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPS--SRQT 678
++IVVATPGR + + + DN + +V DEADR+ ++GF ++ I + +P RQT
Sbjct: 220 TDIVVATPGRLIDFHNKRLVNFDNCQTLVIDEADRMLDMGFIPDVRRIVSWMPKKRDRQT 279
Query: 679 LLFSATLPKMLVEFARAGLSDPTLDKIRVD 768
L+FSAT+ + + DP + + D
Sbjct: 280 LMFSATISSDVNNLSAQWCVDPEVVEAEAD 309
Score = 33.1 bits (72), Expect = 8.3
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQLV 290
F + P++ GI ++ TPIQ +++ L GKD++ G K V
Sbjct: 96 FHDFAIPLPLMHGIADLKFEYCTPIQEQSLEAVLAGKDLIGKANTGTGKTAV 147
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 67.3 bits (157), Expect = 4e-10
Identities = 34/85 (40%), Positives = 52/85 (61%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFS 690
I+VATPGR L + + + L ++ V DEADR+ ++GF ++ I LP+ RQTL FS
Sbjct: 124 ILVATPGRLLDLISQGFISLSSLDFFVLDEADRMLDMGFIHDIKRILKLLPARRQTLFFS 183
Query: 691 ATLPKMLVEFARAGLSDPTLDKIRV 765
AT+P + A + L+ P +K+ V
Sbjct: 184 ATMPPEIETLANSMLTKP--EKVEV 206
Score = 64.1 bits (149), Expect = 4e-09
Identities = 33/78 (42%), Positives = 50/78 (64%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TG+GKTA F +PIL+KL +++ K ++AL+L+PTRELA+Q G++TGL
Sbjct: 45 AQTGTGKTAAFSIPILQKLYKTDHR----KGIKALVLTPTRELAIQIGESFEAYGRYTGL 100
Query: 440 TSAAILGGESIEQQFNVM 493
A I GG + Q + +
Sbjct: 101 KHAVIFGGVGQKPQTDAL 118
Score = 49.6 bits (113), Expect = 9e-05
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F+++ L P+LK + + GY PTPIQ ++IPI L GKD++ + G K
Sbjct: 3 FENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGK 51
>UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putative;
n=58; Proteobacteria|Rep: ATP-dependent RNA helicase
RhlE, putative - Burkholderia mallei (Pseudomonas
mallei)
Length = 516
Score = 67.3 bits (157), Expect = 4e-10
Identities = 36/91 (39%), Positives = 54/91 (59%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFS 690
I+VATPGR L + L +K++V DEADR+ ++GF + + I A P++RQT+LFS
Sbjct: 191 ILVATPGRLLDHLERGRIDLSELKMLVLDEADRMLDMGFIDDIDTIVAATPATRQTMLFS 250
Query: 691 ATLPKMLVEFARAGLSDPTLDKIRVDWKLPS 783
ATL + L DP ++I + K+ S
Sbjct: 251 ATLDGKIGSLTNRLLKDP--ERIEITQKIES 279
Score = 41.5 bits (93), Expect = 0.024
Identities = 15/40 (37%), Positives = 27/40 (67%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVV 254
F S+GLS ++ + GY +PTP+Q++ IP + G+D++
Sbjct: 45 FASLGLSPEIVSALQAAGYVKPTPVQQRAIPAGIAGRDLL 84
Score = 38.7 bits (86), Expect = 0.17
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 21/98 (21%)
Frame = +2
Query: 266 TGSGKTACFVLPILEKLL-----------VPNN---------KPTPGKNLRALILSPTRE 385
TGSGKTA F+LP +E+ P +P P L+L+PTRE
Sbjct: 89 TGSGKTAAFMLPAIERFAQLQKAQAQQPRAPREGQPGERRGRRPQPVARPGLLVLTPTRE 148
Query: 386 LALQTLRFVRELGK-FTGLTSAAILGGESIEQQFNVMS 496
LA+Q GK L + +ILGG + QQ +++
Sbjct: 149 LAMQVTTAASTYGKHLRRLRTVSILGGVAYGQQLMLLA 186
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 67.3 bits (157), Expect = 4e-10
Identities = 33/85 (38%), Positives = 54/85 (63%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
++I+VATPGR L + + + L+ ++ +V DEADR+ +LGF + +Q+I RQTLL
Sbjct: 127 TDILVATPGRLLDLLRQKAISLEKLEYLVLDEADRMLDLGFIDPIQKIMDYAADDRQTLL 186
Query: 685 FSATLPKMLVEFARAGLSDPTLDKI 759
F+AT + + A L++PT K+
Sbjct: 187 FTATADESVEVLAEFYLNNPTKIKV 211
Score = 63.3 bits (147), Expect = 7e-09
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPG-KNLRALILSPTRELALQTLRFVRELGKFTG 436
A+TG+GKTA F LPI+EKL + P G + +RAL+L+PTRELA+Q E G+ G
Sbjct: 48 AQTGTGKTASFALPIIEKL---SKNPIDGYRPVRALVLAPTRELAIQVADNTLEYGRDLG 104
Query: 437 LTSAAILGGESIEQQ 481
+ ++ GG +E Q
Sbjct: 105 MRVISVYGGVPVENQ 119
Score = 37.9 bits (84), Expect = 0.29
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +3
Query: 123 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
S+ +F + L + + GY+QPTPIQ + IP+ L G D++ + G K
Sbjct: 2 SASSFAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGK 54
>UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=4;
Sphingobacteriales|Rep: Possible ATP-dependent RNA
helicase - Cytophaga hutchinsonii (strain ATCC 33406 /
NCIMB 9469)
Length = 463
Score = 67.3 bits (157), Expect = 4e-10
Identities = 32/79 (40%), Positives = 50/79 (63%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+I+VATPGRFL + +E + L +K +V DEAD++ ++GF QL+++ +P RQ LLF
Sbjct: 126 DIIVATPGRFLDLYLEEEIVLKEVKTMVLDEADKMMDMGFMPQLRKMLEVIPRKRQNLLF 185
Query: 688 SATLPKMLVEFARAGLSDP 744
SAT+ + + L P
Sbjct: 186 SATMSERVERLTEEFLEYP 204
Score = 57.2 bits (132), Expect = 4e-07
Identities = 31/69 (44%), Positives = 43/69 (62%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG 436
+A+TG+GKTA + LPIL K+ K G N RA+I PTREL +Q +++L K+T
Sbjct: 48 VAQTGTGKTAAYALPILMKI-----KYAQGHNPRAVIFGPTRELVMQIEIAMKQLAKYTD 102
Query: 437 LTSAAILGG 463
L A+ GG
Sbjct: 103 LRIVALYGG 111
Score = 38.7 bits (86), Expect = 0.17
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F+ + L+ +L I + GY +PT IQ K IP L G D++ + G K
Sbjct: 7 FEELKLNRQLLNAIEEAGYTEPTEIQSKAIPQILAGHDIIGVAQTGTGK 55
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 67.3 bits (157), Expect = 4e-10
Identities = 32/79 (40%), Positives = 51/79 (64%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+I+VATPGR + + L+LD K +V DEAD++ ++GF ++ I +++ RQTLLF
Sbjct: 228 DILVATPGRLEDLVDQKGLRLDETKFLVLDEADQMLDIGFLPAVKRIISKVNKDRQTLLF 287
Query: 688 SATLPKMLVEFARAGLSDP 744
SAT+ K + + L+DP
Sbjct: 288 SATMSKEIKKLTETYLTDP 306
Score = 63.7 bits (148), Expect = 5e-09
Identities = 35/80 (43%), Positives = 49/80 (61%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG 436
+A+TG+GKTA F LP++++LL+ N G++ RA+ILSPTRELALQ GK
Sbjct: 146 LAQTGTGKTAAFALPLIQQLLM-NPIAIKGRSARAIILSPTRELALQIHEAFVSFGKRLP 204
Query: 437 LTSAAILGGESIEQQFNVMS 496
L +GG I +Q +S
Sbjct: 205 LNFTHAIGGAPIRKQMRDLS 224
Score = 42.7 bits (96), Expect = 0.010
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +3
Query: 126 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+ AF +GL ++K + GY PTPIQ + IP L KD+V + G K
Sbjct: 102 ASAFSKLGLDAEIVKALGFLGYTLPTPIQSQAIPAVLNSKDLVGLAQTGTGK 153
>UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Maricaulis maris (strain MCS10)
Length = 787
Score = 67.3 bits (157), Expect = 4e-10
Identities = 33/73 (45%), Positives = 45/73 (61%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+IVV TPGR L + +K VV DEAD + + GF E L+ I P+SR+TLLF
Sbjct: 126 HIVVGTPGRLRDHIERGALDMSQLKAVVLDEADEMLDFGFREDLEYILDAAPASRRTLLF 185
Query: 688 SATLPKMLVEFAR 726
SAT+P+ + + AR
Sbjct: 186 SATVPRAIADIAR 198
Score = 41.1 bits (92), Expect = 0.031
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVREL-GKFTG 436
A+TGSGKTA F + + + LL +++ ALI++PTRELALQ R + L G+ G
Sbjct: 44 AQTGSGKTAAFGMAMAKTLLGDDDQFNRPDLPMALIVAPTRELALQVQRELAWLYGEARG 103
Query: 437 LTSAAILG 460
++ + G
Sbjct: 104 QIASCVGG 111
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 67.3 bits (157), Expect = 4e-10
Identities = 30/79 (37%), Positives = 49/79 (62%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
++ +ATPGR L + + + L K V DEADR+ ++GF L+ I ++LP RQT+ F
Sbjct: 121 HVAIATPGRLLDLMDQGYVDLSQAKTFVLDEADRMLDMGFMPALKTIVSKLPKQRQTIFF 180
Query: 688 SATLPKMLVEFARAGLSDP 744
+AT+P + + A L++P
Sbjct: 181 TATMPPKVAQLASGLLNNP 199
Score = 47.2 bits (107), Expect = 5e-04
Identities = 27/68 (39%), Positives = 38/68 (55%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TG+GKTA F LPIL +L + ++ + L+LSPTRELA+Q + G+
Sbjct: 40 AQTGTGKTAAFALPILNQLDLDRSR-ADACAPQVLVLSPTRELAVQIAQSFNVYGRNVKF 98
Query: 440 TSAAILGG 463
I GG
Sbjct: 99 RLTTIFGG 106
>UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 723
Score = 67.3 bits (157), Expect = 4e-10
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIV---VFDEADRLFELGFGEQLQEICARLPSSRQ 675
+ IV TPGR + + K+ N++ V V DEADR+F++GF Q+ I A L RQ
Sbjct: 241 AEIVACTPGRMIDLLTTGSGKITNLRRVTYMVLDEADRMFDMGFEPQITRILANLRPDRQ 300
Query: 676 TLLFSATLPKMLVEFARAGLSDP 744
T++FSAT P + ARA L +P
Sbjct: 301 TVMFSATFPHTMEALARAALDNP 323
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/78 (33%), Positives = 41/78 (52%)
Frame = +2
Query: 248 CCSMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGK 427
C +A+TGSGKT ++LP+L + + G +I+ PTREL Q + + GK
Sbjct: 157 CIGVAKTGSGKTLAYILPMLRHINAQEPLAS-GDGPIGMIMGPTRELVTQIGKDCKRYGK 215
Query: 428 FTGLTSAAILGGESIEQQ 481
G ++ ++ GG I Q
Sbjct: 216 AMGFSAVSVYGGSGIAAQ 233
Score = 34.7 bits (76), Expect = 2.7
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +3
Query: 147 GLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
GL+ V + I + G+++P PIQ + +P+ ++G+D + + G K L
Sbjct: 123 GLNNRVHELIRRSGFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTL 169
>UniRef50_Q4U8S0 Cluster: DEAD-box family helicase, putative; n=2;
Theileria|Rep: DEAD-box family helicase, putative -
Theileria annulata
Length = 570
Score = 67.3 bits (157), Expect = 4e-10
Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Frame = +1
Query: 502 FSNIVVATPGRFLHICIEMC-LKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQT 678
F ++ TPGR L + I + ++NI++V+ DEAD+L ELGF ++ ++ +RQT
Sbjct: 211 FPETIICTPGRALDMLINSSSINVENIEVVIMDEADKLLELGFRDECLQVLKYCNRNRQT 270
Query: 679 LLFSATLPKMLVEFARAGLSDPTLDKIRVDWKLPSTL 789
+LFSATL + E L +P K+ K+ TL
Sbjct: 271 MLFSATLTEETKELVSLSLVNPVYVKVDDPTKVSRTL 307
Score = 48.4 bits (110), Expect = 2e-04
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Frame = +2
Query: 269 GSGKTACFVLPILEKLLVPN-----NKPTPGKNLR----ALILSPTRELALQTLRFVREL 421
GSGKTA F++P L++L+V K N R AL++ PTRELA Q + + L
Sbjct: 125 GSGKTASFLIPTLQRLVVSGVLKQLTKEKQAYNTRFGTKALVILPTRELAAQCFQVFKSL 184
Query: 422 GKFTGLTSAAILGGESIEQQFN 487
K+ + + GG I++Q N
Sbjct: 185 SKYLSSKAILLTGGIPIKEQEN 206
Score = 36.3 bits (80), Expect = 0.89
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +3
Query: 174 ITKRGYKQPTPIQRKTIPIALTGKDVV 254
I++ GY+ PT IQ K IP+AL GKD++
Sbjct: 93 ISEMGYQNPTIIQSKVIPLALEGKDLL 119
>UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=6; Trypanosomatidae|Rep: ATP-dependent
DEAD/H RNA helicase, putative - Leishmania major
Length = 502
Score = 67.3 bits (157), Expect = 4e-10
Identities = 28/78 (35%), Positives = 50/78 (64%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
++ +ATPGR + + C L + + DEADR+ ++GF +Q+++IC+++ + RQTL+F
Sbjct: 271 HVCIATPGRLIDLLETNCTNLLRVTYLTLDEADRMLDMGFEDQIRKICSQIRTDRQTLMF 330
Query: 688 SATLPKMLVEFARAGLSD 741
SAT P+ + A + D
Sbjct: 331 SATWPREIRNLAASFQKD 348
Score = 42.7 bits (96), Expect = 0.010
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRE-LGKFT 433
+A+TGSGKT F++P ++ PG AL+L+PTRELA+Q R+ L +
Sbjct: 188 VAKTGSGKTMAFMIPAALHIMA-QPPLQPGDGPIALVLAPTRELAVQIETETRKALTRVP 246
Query: 434 GLTSAAILGG 463
+ + + GG
Sbjct: 247 SIMTTCVYGG 256
>UniRef50_Q4Q8D5 Cluster: ATP-dependent RNA helicase, putative; n=6;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 900
Score = 67.3 bits (157), Expect = 4e-10
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Frame = +1
Query: 508 NIVVATPGRFLH-ICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
+I+V TPGR LH + + L LDN+++ DEADRL ++GF E + I A LP RQ+LL
Sbjct: 192 SIIVGTPGRVLHHLQDDAELVLDNLQLFCMDEADRLLDMGFREAITSILAYLPPQRQSLL 251
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSAT + A+ L +P
Sbjct: 252 FSATQTTDVQMLAQMSLKNP 271
Score = 63.3 bits (147), Expect = 7e-09
Identities = 31/74 (41%), Positives = 50/74 (67%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TGSGKT CFV+P+LE+L + + + AL+LSPTRELALQ + ++ +G L
Sbjct: 113 AKTGSGKTLCFVIPVLERLY--RERWSSDMGVGALLLSPTRELALQIFKVMQLVGYKHVL 170
Query: 440 TSAAILGGESIEQQ 481
++A + GG ++++
Sbjct: 171 SAALLTGGRDVQEE 184
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 67.3 bits (157), Expect = 4e-10
Identities = 31/81 (38%), Positives = 54/81 (66%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
+++VVATPGR L + L +++I+V DEADR+ ++GF + ++EI PS RQT++
Sbjct: 119 ADVVVATPGRLLDHIERGTIDLGDVEILVLDEADRMLDMGFIDDVEEIIDECPSDRQTMM 178
Query: 685 FSATLPKMLVEFARAGLSDPT 747
FSAT+ K + + +++P+
Sbjct: 179 FSATVSKDIQYLSSKYMNNPS 199
Score = 49.2 bits (112), Expect = 1e-04
Identities = 30/74 (40%), Positives = 40/74 (54%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A TGSGKT F I++K+ G +RAL+L+PTRELA Q ++E + L
Sbjct: 46 AATGSGKTLAFGCGIIQKI-------EKGNGIRALVLTPTRELAEQVQNSLKEFSRHKQL 98
Query: 440 TSAAILGGESIEQQ 481
A I GG +I Q
Sbjct: 99 RVAPIYGGVAINPQ 112
Score = 41.9 bits (94), Expect = 0.018
Identities = 17/52 (32%), Positives = 31/52 (59%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
+F+ +G+ +L+ I + +++PT IQ+ IP+ L GKD++ G K L
Sbjct: 3 SFKKLGIEDAILRSIEDKKFEEPTEIQKMAIPLILEGKDIIGGAATGSGKTL 54
>UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Lodderomyces elongisporus NRRL
YB-4239|Rep: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 994
Score = 67.3 bits (157), Expect = 4e-10
Identities = 32/82 (39%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIK---IVVFDEADRLFELGFGEQLQEICARLPSSRQT 678
N++VATPGR + + ++ ++ VV DEADR+F++GF Q+Q+I ++ +QT
Sbjct: 513 NVIVATPGRLIDLLAANGGRITTLRRTTFVVLDEADRMFDMGFEPQIQKIFTQIRPDKQT 572
Query: 679 LLFSATLPKMLVEFARAGLSDP 744
+LFSAT P+ L + A+ L +P
Sbjct: 573 VLFSATFPRKLEQLAKKVLHNP 594
Score = 54.4 bits (125), Expect = 3e-06
Identities = 30/77 (38%), Positives = 43/77 (55%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG 436
+A+TGSGKT +VLP++ + P PG+ L+LSPTRELALQ + + +
Sbjct: 431 VAKTGSGKTLSYVLPMVRHIQ-DQLFPKPGEGPIGLVLSPTRELALQIEKEILKFSSTMD 489
Query: 437 LTSAAILGGESIEQQFN 487
L GG +IE Q +
Sbjct: 490 LKVCCCYGGSNIENQIS 506
Score = 33.9 bits (74), Expect = 4.7
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +3
Query: 186 GYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
G+ +P+PIQ + IPI L+G+D++ + G K L
Sbjct: 407 GFAKPSPIQCQAIPIVLSGRDMIGVAKTGSGKTL 440
>UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DRS1 -
Ustilago maydis (Smut fungus)
Length = 932
Score = 67.3 bits (157), Expect = 4e-10
Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Frame = +1
Query: 511 IVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLP-SSRQTLL 684
+V+ATPGR + H+ LD+I+I+V DEADR+ E GF ++L EI P +RQT+L
Sbjct: 461 VVIATPGRLIDHVRNSASFTLDDIEILVMDEADRMLEDGFADELNEIVKSCPKGARQTML 520
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSAT+ + + R L P
Sbjct: 521 FSATMTDDVEQLVRLSLKRP 540
Score = 59.7 bits (138), Expect = 8e-08
Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGK-NLRALILSPTRELALQTLRFVRELGKFTG 436
A TGSGKTA F++P +E+L TP + R LIL+PTRELA+Q + + KFT
Sbjct: 377 AVTGSGKTAAFMIPTIERLTWRAKTRTPHEAKSRVLILAPTRELAIQCYSVGKSIAKFTD 436
Query: 437 LTSAAILGGESIEQQ 481
+ +GG S++ Q
Sbjct: 437 IRFCLCVGGLSVKSQ 451
Score = 50.0 bits (114), Expect = 7e-05
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = +3
Query: 123 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+ +F + LS PVL+ ++ + +PTPIQ +TIPIAL GKD+V G K
Sbjct: 331 AESSFGAFDLSRPVLRALSSLSFHKPTPIQSRTIPIALAGKDIVAGAVTGSGK 383
>UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20;
Ascomycota|Rep: ATP-dependent RNA helicase DBP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 523
Score = 67.3 bits (157), Expect = 4e-10
Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS-RQTL 681
S +VVATPGR L + E + L + +V DEADR+ E GF E ++ I +S RQTL
Sbjct: 232 SQVVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKGFEEDIKNIIRETDASKRQTL 291
Query: 682 LFSATLPKMLVEFARAGLSDP 744
+F+AT PK + E A +++P
Sbjct: 292 MFTATWPKEVRELASTFMNNP 312
Score = 42.7 bits (96), Expect = 0.010
Identities = 25/75 (33%), Positives = 39/75 (52%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG 436
+A TGSGKT F +P + L+ K + ++ L++SPTRELA Q + L G
Sbjct: 155 VAETGSGKTFAFGVPAISHLMNDQKK----RGIQVLVISPTRELASQIYDNLIVLTDKVG 210
Query: 437 LTSAAILGGESIEQQ 481
+ + GG ++Q
Sbjct: 211 MQCCCVYGGVPKDEQ 225
>UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 549
Score = 66.9 bits (156), Expect = 5e-10
Identities = 29/62 (46%), Positives = 44/62 (70%)
Frame = +1
Query: 514 VVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFSA 693
+VATPGR + + E + L ++ +VFDEADR+F++GF + ++ I R+P RQ L+FSA
Sbjct: 146 IVATPGRLIDLYKEHLVDLKQVRAIVFDEADRMFDMGFKDDMKYILQRVPRERQLLVFSA 205
Query: 694 TL 699
TL
Sbjct: 206 TL 207
Score = 44.8 bits (101), Expect = 0.003
Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 19/102 (18%)
Frame = +2
Query: 233 IDRERCCSMARTGSGKTACFVLPILEKLLVPNNKPTPGK---------NLRA-------- 361
+D + +A+TG+GKTA FV+P++E++L +P G+ RA
Sbjct: 36 LDGKDVAGLAQTGTGKTAAFVIPVMERIL--RARPIQGEVTEEQKALIEKRAYKDWKPQN 93
Query: 362 --LILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ 481
LIL PTRELA Q + +L +GL AI GG ++Q
Sbjct: 94 FVLILVPTRELAEQVQDNINKLSVDSGLRGFAIYGGTGYDKQ 135
Score = 36.7 bits (81), Expect = 0.67
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F + L +L I K Y TPIQ + IP L GKDV + G K
Sbjct: 3 FSELNLDSQLLSAIQKLNYDDCTPIQEQAIPPVLDGKDVAGLAQTGTGK 51
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 66.9 bits (156), Expect = 5e-10
Identities = 36/80 (45%), Positives = 53/80 (66%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG 436
+A+TG+GKTA F LP+L+KL + + R+LIL PTRELALQ + GK+
Sbjct: 334 VAQTGTGKTASFTLPMLQKLAGSRAR---ARMPRSLILEPTRELALQVAENFKLYGKYLR 390
Query: 437 LTSAAILGGESIEQQFNVMS 496
LT A ++GGES+ +Q +V++
Sbjct: 391 LTHALLIGGESMAEQRDVLN 410
Score = 61.7 bits (143), Expect = 2e-08
Identities = 32/79 (40%), Positives = 47/79 (59%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
++++ATPGR L + L L +V DEADR+ ++GF +++I A LP+ RQTL F
Sbjct: 414 DVLIATPGRLLDLFGRGGLLLTQTSTLVIDEADRMLDMGFIPDIEKIVALLPAHRQTLFF 473
Query: 688 SATLPKMLVEFARAGLSDP 744
SAT+ + A A L P
Sbjct: 474 SATMAPEIRRLADAFLRHP 492
Score = 46.8 bits (106), Expect = 6e-04
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F +GLS P+++ I + GY+ PTPIQ + IP L G DV+ + G K
Sbjct: 293 FADLGLSEPIMRAIEELGYEHPTPIQAQAIPEVLKGHDVLGVAQTGTGK 341
>UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n=2;
Bacteria|Rep: Superfamily II DNA and RNA helicases -
Syntrophus aciditrophicus (strain SB)
Length = 572
Score = 66.9 bits (156), Expect = 5e-10
Identities = 32/80 (40%), Positives = 47/80 (58%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
+ +VVATPGR + + L + VV DEAD + ++GF ++L I A P S+ TLL
Sbjct: 123 AQVVVATPGRLHDLIRRGAVDLSGVSWVVLDEADEMLQMGFQDELNAILAVTPDSKNTLL 182
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSAT+P+ + A + DP
Sbjct: 183 FSATMPREVAAIAANYMKDP 202
Score = 43.6 bits (98), Expect = 0.006
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT- 433
+A+TG+GKTA F +P+++ T K +AL+L PTREL +Q + +G++
Sbjct: 46 LAQTGTGKTAAFGIPLIQL------TDTRLKRTQALVLCPTRELCVQVAGDLNLMGRYVQ 99
Query: 434 GLTSAAILGGESIEQQ 481
L + GG SI Q
Sbjct: 100 KLKIVPVYGGASIVSQ 115
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 66.9 bits (156), Expect = 5e-10
Identities = 32/82 (39%), Positives = 48/82 (58%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
++I+VATPGR L + L L N++ +V DEADR+ ++GF +Q+I + RQ LL
Sbjct: 125 ADIIVATPGRLLEHIVACNLSLSNVEFLVLDEADRMLDMGFSTDIQKILQAVNKKRQNLL 184
Query: 685 FSATLPKMLVEFARAGLSDPTL 750
FSAT + + A L P +
Sbjct: 185 FSATFSTAVKKLANDMLDKPKI 206
Score = 54.8 bits (126), Expect = 2e-06
Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Frame = +2
Query: 242 ERCCSMARTGSGKTACFVLPILEKLLVPNNKP--TPGKNLRALILSPTRELALQTLRFVR 415
E + A+TG+GKTA F LPIL+K+ + +P N RALIL+PTRELA Q +
Sbjct: 39 EDVLASAQTGTGKTAAFALPILQKM---HERPMTVQHSNARALILTPTRELAAQVADNIS 95
Query: 416 ELGKFTGLTSAAILGGESIEQQ 481
K ++ I GG + Q
Sbjct: 96 AYSKHMNISVLTIYGGMKMATQ 117
Score = 36.7 bits (81), Expect = 0.67
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F+S + +L+ I + GY+ TP+Q++ IP G+DV+ + G K
Sbjct: 3 FESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGK 51
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 66.9 bits (156), Expect = 5e-10
Identities = 33/78 (42%), Positives = 47/78 (60%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFS 690
I++ATPGR L + + L +++++V DEAD++ LGF E++ I LP RQ LLFS
Sbjct: 135 ILIATPGRLLDLVDSKAVYLSDVEVLVLDEADKMLNLGFKEEMANIFKLLPQKRQNLLFS 194
Query: 691 ATLPKMLVEFARAGLSDP 744
ATL K + L DP
Sbjct: 195 ATLGKDVDTITEFLLHDP 212
Score = 55.2 bits (127), Expect = 2e-06
Identities = 38/85 (44%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKN--LRALILSPTRELALQTLRFVRELGKF 430
+A+TGSGKTA FVLPIL+ L KP GKN + AL+L PTRELA+Q + +
Sbjct: 52 IAQTGSGKTASFVLPILQML---QTKPL-GKNRHINALVLVPTRELAVQVGQVFQAFSNA 107
Query: 431 --TGLTSAAILGGESIEQQFNVMSG 499
+ S A+ GG SI Q + G
Sbjct: 108 LPNKIKSLAVYGGVSINPQMIQLQG 132
Score = 43.6 bits (98), Expect = 0.006
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+F ++GLS +LK + K+ Y P PIQ + IP L GKD++ + G K
Sbjct: 10 SFATLGLSPAILKALEKQFYNAPYPIQEQAIPAILKGKDILGIAQTGSGK 59
>UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4).
EIF4A-1-family RNA SFII helicase; n=3;
Cryptosporidium|Rep: Hca4p helicase DBP4 (Helicase CA4).
EIF4A-1-family RNA SFII helicase - Cryptosporidium
parvum Iowa II
Length = 770
Score = 66.9 bits (156), Expect = 5e-10
Identities = 42/110 (38%), Positives = 66/110 (60%), Gaps = 6/110 (5%)
Frame = +2
Query: 227 NSIDRERCCSMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLR 406
+S+ ARTGSGKT +V+PILE + N G L +LIL+PTRELA Q
Sbjct: 104 HSLQGRDIIGQARTGSGKTLAYVIPILENIYRDNYCSIDG--LLSLILTPTRELASQVFD 161
Query: 407 FVRELGKF-TGLTSAAILGGESIEQQ---FNVMS--GSSPT*LLQHLGAS 538
++E+GKF + L++ I+GG+ I+ + N+++ ++P L+QH+ S
Sbjct: 162 VIKEIGKFHSTLSAGCIVGGKDIKSESSRINMLNILVATPGRLIQHMDES 211
Score = 56.4 bits (130), Expect = 8e-07
Identities = 32/68 (47%), Positives = 45/68 (66%), Gaps = 4/68 (5%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCL-KLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS---RQ 675
NI+VATPGR + E L +N+KI+V DE DR+ ++GF ++ I +PSS RQ
Sbjct: 195 NILVATPGRLIQHMDESPLWDANNLKILVIDEVDRMLDMGFLNDIKIILDGIPSSSSGRQ 254
Query: 676 TLLFSATL 699
T+LFSAT+
Sbjct: 255 TMLFSATV 262
Score = 39.5 bits (88), Expect = 0.095
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +3
Query: 123 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
S F + +S L+G+ GY Q T IQR T+P +L G+D++ G K L
Sbjct: 69 SPDLFSDLPISRRTLEGLRAEGYYQMTLIQRDTLPHSLQGRDIIGQARTGSGKTL 123
>UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;
n=2; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent
RNA helicase 42 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1166
Score = 66.9 bits (156), Expect = 5e-10
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVF---DEADRLFELGFGEQLQEICARLPSSRQ 675
+ IVV TPGR + I K+ N++ V F DEADR+F++GF Q+ I + RQ
Sbjct: 653 TEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQ 712
Query: 676 TLLFSATLPKMLVEFARAGLSDP 744
T+LFSAT P+ + AR L+ P
Sbjct: 713 TVLFSATFPRQVETLARKVLNKP 735
Score = 53.2 bits (122), Expect = 7e-06
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +2
Query: 248 CCSMARTGSGKTACFVLPILEKLLVPNNKPTP-GKNLRALILSPTRELALQTLRFVRELG 424
C +A+TGSGKT FVLP+L + + P G L+++PTREL Q +R+
Sbjct: 569 CIGVAKTGSGKTLGFVLPMLRH--IKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFS 626
Query: 425 KFTGLTSAAILGGESIEQQFN 487
K G+ + GG + QQ +
Sbjct: 627 KPLGIRCVPVYGGSGVAQQIS 647
Score = 37.1 bits (82), Expect = 0.51
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +3
Query: 147 GLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
GL+ +L + K Y++P PIQ + +PI ++G+D + + G K L
Sbjct: 535 GLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTL 581
>UniRef50_Q9UTP9 Cluster: ATP-dependent RNA helicase dbp4; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp4 - Schizosaccharomyces pombe (Fission
yeast)
Length = 735
Score = 66.9 bits (156), Expect = 5e-10
Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Frame = +1
Query: 508 NIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
NI+V TPGR L HI + +++++ DEADR+ ++GF L I + LP RQT+L
Sbjct: 162 NILVCTPGRLLQHIDQAVNFDTSGLQMLILDEADRILDMGFRTTLDAIVSSLPVHRQTML 221
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSAT K + + AR L +P
Sbjct: 222 FSATQTKSVKDLARLSLQNP 241
Score = 62.5 bits (145), Expect = 1e-08
Identities = 35/95 (36%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TGSGKT F++P++E L K T L AL++SPTRELA+QT + ++G+
Sbjct: 83 AKTGSGKTLAFIVPLIENLY--RKKWTSLDGLGALVISPTRELAIQTFETLVKIGRLHSF 140
Query: 440 TSAAILGGESIEQQFNVMSG-----SSPT*LLQHL 529
++ I+GG + +++ +S +P LLQH+
Sbjct: 141 SAGLIIGGNNYKEEKERLSRMNILVCTPGRLLQHI 175
>UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 836
Score = 66.5 bits (155), Expect = 7e-10
Identities = 34/88 (38%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Frame = +1
Query: 508 NIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
+IV+ATPGR + H+ LD I++++ DEADR+ + F EQ++ I + +RQT+L
Sbjct: 277 DIVIATPGRLIDHLANTPTFSLDTIEVLILDEADRMLDEYFAEQMKHIVRQCARTRQTIL 336
Query: 685 FSATLPKMLVEFARAGLSDPTLDKIRVD 768
FSAT+ + + + A L P K+ VD
Sbjct: 337 FSATMTEEVKDLAAVSLDKPV--KVFVD 362
Score = 64.5 bits (150), Expect = 3e-09
Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Frame = +2
Query: 251 CSMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF 430
C A TG+GKTA ++LP LE+LL +P G R L+L PTREL +Q + ++L +F
Sbjct: 195 CGCAATGTGKTAAYMLPTLERLLY---RPLDGAVTRVLVLVPTRELGVQVYQVTKQLSQF 251
Query: 431 TGLTSAAILGGESIEQQFNVMSG------SSPT*LLQHLGASYTSAL 553
T + +GG ++ Q +V+ ++P L+ HL + T +L
Sbjct: 252 TSVEVGLSVGGLDVKVQESVLRKNPDIVIATPGRLIDHLANTPTFSL 298
Score = 50.4 bits (115), Expect = 5e-05
Identities = 25/73 (34%), Positives = 36/73 (49%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQLVXXXXXXRN 314
F +M LS P+LK +T + PTPIQ TIP+AL G+D+ G K
Sbjct: 156 FYNMNLSRPLLKAVTSMNFVNPTPIQAATIPVALMGRDICGCAATGTGKTAAYMLPTLER 215
Query: 315 FLFRTTNLHLERI 353
L+R + + R+
Sbjct: 216 LLYRPLDGAVTRV 228
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 66.5 bits (155), Expect = 7e-10
Identities = 32/82 (39%), Positives = 50/82 (60%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
+ +VV TPGR L+ +N+ VV DEADR+ ++GF Q++ I + P +RQTLL
Sbjct: 165 TQLVVGTPGRVHDHLQRGTLRTNNVWCVVLDEADRMLDIGFRPQIERIMRKCPRNRQTLL 224
Query: 685 FSATLPKMLVEFARAGLSDPTL 750
SATLP ++ A + + +P +
Sbjct: 225 LSATLPPVVRRLAESYMHEPVV 246
Score = 47.2 bits (107), Expect = 5e-04
Identities = 27/82 (32%), Positives = 45/82 (54%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
ARTG+GKTA F +PILE+L + ++ +A+++ PTRELA Q L +
Sbjct: 88 ARTGTGKTAAFSIPILEQL----DSLEDCRDPQAIVIVPTRELADQVAAEAERLARGVPT 143
Query: 440 TSAAILGGESIEQQFNVMSGSS 505
A + GG+++ +Q + +
Sbjct: 144 EIAVLSGGKNMNRQLRQLENGT 165
Score = 36.3 bits (80), Expect = 0.89
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+F + LS + + + G+ P+PIQ IP AL GKDV+ G K
Sbjct: 45 SFDELDLSPIMRRAVKDAGFTTPSPIQAALIPHALNGKDVIGQARTGTGK 94
>UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacteroidales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 427
Score = 66.5 bits (155), Expect = 7e-10
Identities = 32/80 (40%), Positives = 51/80 (63%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
++IV+ATPGR + L ++ V DEADR+ ++GF + + +I +LPSS QT++
Sbjct: 126 ADIVIATPGRLISHLNLGSADLSHVSYFVLDEADRMLDMGFFDDIMQIYKQLPSSCQTVM 185
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSAT+P + + A + L DP
Sbjct: 186 FSATMPPKIRKLAASILRDP 205
Score = 46.8 bits (106), Expect = 6e-04
Identities = 27/68 (39%), Positives = 42/68 (61%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TG+GKTA ++LPIL++L + + A+I++PTRELA Q + V F +
Sbjct: 45 AQTGTGKTAAYLLPILDRL---SAGEFASDVVNAVIMAPTRELAQQIDQQVEGFSYFMPV 101
Query: 440 TSAAILGG 463
++ AI GG
Sbjct: 102 SAVAIYGG 109
Score = 36.3 bits (80), Expect = 0.89
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F + L VL G+ + + TP+Q TIP L G+DV+ + G K
Sbjct: 3 FDELNLGDEVLDGLDAMNFIETTPVQAATIPPILEGRDVIACAQTGTGK 51
>UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular
organisms|Rep: DEAD/DEAH box helicase - Thiobacillus
denitrificans (strain ATCC 25259)
Length = 533
Score = 66.5 bits (155), Expect = 7e-10
Identities = 31/73 (42%), Positives = 48/73 (65%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
++VVATPGR + + ++++V DEADR+ ++GF + ++ I AR P+ RQTLLF
Sbjct: 126 DVVVATPGRLIDHLERGKIDFSRLEVLVLDEADRMLDMGFVDDIKAIAARCPAERQTLLF 185
Query: 688 SATLPKMLVEFAR 726
SATL ++ AR
Sbjct: 186 SATLDGVVGNLAR 198
Score = 50.4 bits (115), Expect = 5e-05
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGK-FTG 436
+ TGSGKTA F+LP +++LL + G R L+L+PTRELALQ + GK
Sbjct: 45 SHTGSGKTAAFLLPSIQRLLAEPAVKSIGP--RVLVLTPTRELALQVEKAAMTYGKEMRR 102
Query: 437 LTSAAILGGESIEQQFNVMS 496
+A ++GG Q +S
Sbjct: 103 FRTACLVGGAPYGLQLKRLS 122
Score = 40.7 bits (91), Expect = 0.041
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+F +GL +LK + GY+ TP+Q++ IP AL+G D++ G K
Sbjct: 2 SFSELGLDPLILKSVLAAGYENATPVQQQAIPAALSGGDLLVSSHTGSGK 51
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 66.5 bits (155), Expect = 7e-10
Identities = 32/85 (37%), Positives = 50/85 (58%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
++IVV TPGR + L ++ ++ DEAD + +GF E ++ I RLP RQT+L
Sbjct: 121 AHIVVGTPGRIIDHLDRRTLNASHLSQIILDEADEMLNMGFREDIELILTRLPEERQTVL 180
Query: 685 FSATLPKMLVEFARAGLSDPTLDKI 759
FSATL ++ A+ ++P + KI
Sbjct: 181 FSATLAPPILALAKRFQNNPEIIKI 205
Score = 59.3 bits (137), Expect = 1e-07
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF-TG 436
A+TG+GKTA F +P +E + + N+ ++LIL PTRELALQ +++L KF G
Sbjct: 45 AQTGTGKTAAFGIPAIEHVDISINQT------QSLILCPTRELALQVCTELKKLSKFKKG 98
Query: 437 LTSAAILGGESIEQQ 481
L A+ GGESIE+Q
Sbjct: 99 LRVLAVYGGESIERQ 113
Score = 49.2 bits (112), Expect = 1e-04
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F+ +GLS V++ I GY + TPIQ KTIPI +TGKD+ + G K
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGK 51
>UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 440
Score = 66.5 bits (155), Expect = 7e-10
Identities = 32/85 (37%), Positives = 52/85 (61%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFS 690
++VATPGR E +KLD + ++V DEADR+ +LGF +++ I + RQT++FS
Sbjct: 154 VIVATPGRLRDFMEEGVIKLDRVTMLVLDEADRMLDLGFEPEIRAIAGATRADRQTVMFS 213
Query: 691 ATLPKMLVEFARAGLSDPTLDKIRV 765
AT P+ + A + +P K+R+
Sbjct: 214 ATWPQSVQSLASEFMCNPI--KVRI 236
Score = 48.8 bits (111), Expect = 2e-04
Identities = 30/84 (35%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPT--PGKNLRALILSPTRELALQTLRFVRELGKF 430
+A TGSGKT F +P L ++ +++P PG+ + L+L+PTRELA QT + + G+
Sbjct: 70 IAATGSGKTLAFGMPALTQI---HSQPPCKPGQPI-CLVLAPTRELAQQTAKVFDDAGEA 125
Query: 431 TGLTSAAILGG-ESIEQQFNVMSG 499
+G+ + GG EQ+ + +G
Sbjct: 126 SGVRCVCVYGGAPKYEQKAQMKAG 149
>UniRef50_Q7R0K7 Cluster: GLP_154_39979_41331; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_154_39979_41331 - Giardia lamblia
ATCC 50803
Length = 450
Score = 66.5 bits (155), Expect = 7e-10
Identities = 34/75 (45%), Positives = 47/75 (62%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG 436
+A TGSGKT F +P L+ LL + T K + ++LSPTRELA+QT R+LGK G
Sbjct: 46 VAETGSGKTGAFAIPALQDLL---ERGTNVKGVHTVVLSPTRELAVQTFSVFRDLGKDFG 102
Query: 437 LTSAAILGGESIEQQ 481
L + ++GG + QQ
Sbjct: 103 LRTGLVIGGVDLMQQ 117
Score = 49.2 bits (112), Expect = 1e-04
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +1
Query: 508 NIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
++++ TPGR + H+ L +++ ++ DEAD++ E G + + P R+T L
Sbjct: 126 HVLICTPGRLVDHLATTEGFSLKSLRFLIIDEADKMLEQDMGRAVLNLAKDCPQRRRTFL 185
Query: 685 FSATLP 702
FSAT P
Sbjct: 186 FSATFP 191
>UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD15481p
- Drosophila melanogaster (Fruit fly)
Length = 782
Score = 66.5 bits (155), Expect = 7e-10
Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Frame = +1
Query: 508 NIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
+IV+ATPGR + HI LD+I++++ DEADR+ + F EQ++EI +RQT+L
Sbjct: 281 DIVIATPGRLIDHIKNTPSFTLDSIEVLILDEADRMLDEYFAEQMKEIINSCCKTRQTML 340
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSAT+ + + + A L P
Sbjct: 341 FSATMSEQVKDLAAVSLDKP 360
Score = 58.4 bits (135), Expect = 2e-07
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +2
Query: 251 CSMARTGSGKTACFVLPILEKLLVPNNKPTPGKNL-RALILSPTRELALQTLRFVRELGK 427
C A TG+GKTA ++LP LE+LL +P K + R L+L PTREL Q + ++L +
Sbjct: 198 CGCAATGTGKTAAYMLPTLERLLY---RPLNNKAITRVLVLVPTRELGAQVYQVTKQLCQ 254
Query: 428 FTGLTSAAILGGESIEQQFNVM 493
FT + +GG ++ Q V+
Sbjct: 255 FTTIDVGLAIGGLDVKAQEAVL 276
Score = 49.6 bits (113), Expect = 9e-05
Identities = 25/68 (36%), Positives = 33/68 (48%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQLVXXXXXXR 311
+F M LS P+++ I GY PTPIQ TIP+AL G+D+ G K
Sbjct: 158 SFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLGRDICGCAATGTGKTAAYMLPTLE 217
Query: 312 NFLFRTTN 335
L+R N
Sbjct: 218 RLLYRPLN 225
>UniRef50_Q23WN3 Cluster: Helicase conserved C-terminal domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Helicase conserved C-terminal domain
containing protein - Tetrahymena thermophila SB210
Length = 602
Score = 66.5 bits (155), Expect = 7e-10
Identities = 30/79 (37%), Positives = 51/79 (64%)
Frame = +1
Query: 514 VVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFSA 693
+V TPGR + + ++ + +V DEADRL ++ F ++++ I +P +RQTLLFS+
Sbjct: 288 MVGTPGRTSDMVDKQKFNMNLCRYIVLDEADRLLDMIFEKEIRNIIDHVPGARQTLLFSS 347
Query: 694 TLPKMLVEFARAGLSDPTL 750
T+PK + +FA+ L DP +
Sbjct: 348 TMPKKVQDFAKQALIDPII 366
>UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 515
Score = 66.5 bits (155), Expect = 7e-10
Identities = 36/73 (49%), Positives = 50/73 (68%)
Frame = +2
Query: 251 CSMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF 430
C+ A TGSGKTA F++P +E+LL +K T + RA+ILSPTRELA QT + ++ +F
Sbjct: 57 CASAVTGSGKTAAFLIPTVERLL--RSKSTEAQT-RAVILSPTRELAAQTYSVLSQIIQF 113
Query: 431 TGLTSAAILGGES 469
T LT+ + GG S
Sbjct: 114 TPLTALLLTGGSS 126
Score = 56.0 bits (129), Expect = 1e-06
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +1
Query: 502 FSNIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQT 678
+ + +V TPGR + HI L+N+ ++V DE+DRL + GF Q++E+ LP + Q+
Sbjct: 138 YPDFLVCTPGRIIDHIKNCEGFTLENVLVLVLDESDRLLQEGFYSQIEEVHKSLPETTQS 197
Query: 679 LLFSATLPKMLVEFARAGLSDP 744
+L +AT+ + A L P
Sbjct: 198 ILVTATMNSSVSRLAEMSLKKP 219
Score = 49.2 bits (112), Expect = 1e-04
Identities = 19/40 (47%), Positives = 30/40 (75%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDV 251
+F+ +GLS +++ + K ++ PTP+Q KTIPIAL G+DV
Sbjct: 17 SFEELGLSHSIIRALHKMNFEIPTPVQNKTIPIALQGRDV 56
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 66.5 bits (155), Expect = 7e-10
Identities = 31/84 (36%), Positives = 52/84 (61%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFS 690
IVV TPGR L +KL+N+ VV DEAD + +GF + ++EI + + ++ LLFS
Sbjct: 124 IVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVSTEKRMLLFS 183
Query: 691 ATLPKMLVEFARAGLSDPTLDKIR 762
ATLP +++ A+ + + + K++
Sbjct: 184 ATLPDSIMKLAKNYMREYDIIKVK 207
Score = 53.2 bits (122), Expect = 7e-06
Identities = 30/74 (40%), Positives = 44/74 (59%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TG+GKTA F +PILE + +N +ALIL+PTRELA+Q + + L
Sbjct: 47 AQTGTGKTAAFGIPILETI------DESSRNTQALILAPTRELAIQVAEEIDSIKGSKRL 100
Query: 440 TSAAILGGESIEQQ 481
+ GG+SI++Q
Sbjct: 101 NVFPVYGGQSIDRQ 114
Score = 46.4 bits (105), Expect = 8e-04
Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGK-DVVQWPELGPEK 281
+F+++GLS +L+ + K+G+ PTPIQ + IPI + GK D+V + G K
Sbjct: 3 SFKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQTGTGK 53
>UniRef50_Q6C193 Cluster: ATP-dependent rRNA helicase SPB4; n=1;
Yarrowia lipolytica|Rep: ATP-dependent rRNA helicase
SPB4 - Yarrowia lipolytica (Candida lipolytica)
Length = 626
Score = 66.5 bits (155), Expect = 7e-10
Identities = 35/88 (39%), Positives = 48/88 (54%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFS 690
I+VATPGR L + +K +V DEADRL +LGFG + I LP R+T LFS
Sbjct: 159 IIVATPGRLLELLRAPQIKTSAFDSLVLDEADRLLDLGFGRDITSIINILPKQRRTGLFS 218
Query: 691 ATLPKMLVEFARAGLSDPTLDKIRVDWK 774
AT+ + + GL +P ++V K
Sbjct: 219 ATITDAIQNLVKIGLRNPVKIVVKVGGK 246
Score = 43.2 bits (97), Expect = 0.008
Identities = 20/55 (36%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLL-VPNNKPTPGKNLRALILSPTRELALQTLRFVREL 421
A TGSGKT F++P+++++L + P + ++++SPTRELA QT ++ +
Sbjct: 47 AVTGSGKTIAFLVPLIQRMLNLLKEGPAVSGRVYSVVVSPTRELARQTYEVLQSI 101
>UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 1357
Score = 66.1 bits (154), Expect = 1e-09
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIK---IVVFDEADRLFELGFGEQLQEICARLPSSRQTL 681
IVVATPGR + + K+ N+K +VV DEADR+F+LGF Q+ +I A +QT+
Sbjct: 833 IVVATPGRLIDVLTTSNGKITNLKRITMVVIDEADRMFDLGFEPQIAKILATTRPDKQTV 892
Query: 682 LFSATLPKMLVEFAR 726
LFSAT PK + A+
Sbjct: 893 LFSATFPKNVENLAK 907
Score = 42.3 bits (95), Expect = 0.013
Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +2
Query: 254 SMARTGSGKTACFVLPILEKLLVPNNKP-TPGKNLRALILSPTRELALQTLRFVRELGKF 430
S+A TGSGKT ++LP++ V +P G LIL PTRELA Q + K
Sbjct: 749 SIAETGSGKTLAYLLPMIRH--VSAQRPLQEGDGPIGLILVPTRELATQIYLEAKPFLKA 806
Query: 431 TGLTSAAILGGESIEQQFN 487
A+ GG I+ Q +
Sbjct: 807 YKYEIVAVFGGTGIKGQLS 825
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 66.1 bits (154), Expect = 1e-09
Identities = 30/72 (41%), Positives = 45/72 (62%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFS 690
IVV TPGR + L +K VV DEAD++ ++GF ++++ + LP SRQT+LFS
Sbjct: 169 IVVGTPGRLADFVGRNRIDLSAVKTVVLDEADKMLDMGFADEIKTVMRDLPGSRQTVLFS 228
Query: 691 ATLPKMLVEFAR 726
AT P+ + +R
Sbjct: 229 ATFPESIEHLSR 240
Score = 59.7 bits (138), Expect = 8e-08
Identities = 38/79 (48%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELG-KFTG 436
A+TGSGKTA F LPIL K+ N P L+ALIL PTRELA Q + +R+LG + G
Sbjct: 91 AKTGSGKTAAFSLPILNKI----NLDQP--LLQALILCPTRELASQVVTEIRKLGRRLPG 144
Query: 437 LTSAAILGGESIEQQFNVM 493
L A+ GG+S +Q + +
Sbjct: 145 LKVLAMTGGQSGREQADAL 163
Score = 39.1 bits (87), Expect = 0.13
Identities = 18/53 (33%), Positives = 32/53 (60%)
Frame = +3
Query: 123 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
S F ++ LS +L + + G++ TPIQ+++IP+ L GKD++ + G K
Sbjct: 45 SQNEFSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAKTGSGK 97
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 66.1 bits (154), Expect = 1e-09
Identities = 34/78 (43%), Positives = 46/78 (58%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFS 690
I++ATPGR L + L ++I+V DEADR+ ++GF LQ I LP RQTLLFS
Sbjct: 140 ILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFS 199
Query: 691 ATLPKMLVEFARAGLSDP 744
AT + + A L +P
Sbjct: 200 ATFSPEIKKLASTYLRNP 217
Score = 63.3 bits (147), Expect = 7e-09
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVP-NNKPTPGKN-LRALILSPTRELALQTLRFVRELGKFT 433
A+TG+GKTA F LPI+++LL N +P ++ +RALIL+PTRELA Q V K T
Sbjct: 55 AQTGTGKTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHT 114
Query: 434 GLTSAAILGGESIEQQ 481
L SA + GG + Q
Sbjct: 115 PLRSAVVFGGVDMNPQ 130
Score = 50.8 bits (116), Expect = 4e-05
Identities = 22/49 (44%), Positives = 31/49 (63%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F GL+ +LK I ++GY PTPIQ K IP+ L+G+DV+ + G K
Sbjct: 13 FDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGK 61
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 66.1 bits (154), Expect = 1e-09
Identities = 30/79 (37%), Positives = 52/79 (65%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+I+VATPGR + + +K+ +KI+V DEAD + +LGF + +Q++ LP+ QTL F
Sbjct: 125 DILVATPGRMFDLIYQKHIKITRVKILVLDEADHMLDLGFIKDIQDVKKFLPARHQTLFF 184
Query: 688 SATLPKMLVEFARAGLSDP 744
SAT+ + + + A + + +P
Sbjct: 185 SATINEEIKKLAYSLVKNP 203
Score = 62.1 bits (144), Expect = 2e-08
Identities = 31/80 (38%), Positives = 50/80 (62%)
Frame = +2
Query: 242 ERCCSMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVREL 421
E ++A+TG+GKTA FV+P+L L+ N K + ++ L+++PTRELA+Q +++
Sbjct: 39 EDVLAIAQTGTGKTAAFVIPVLNTLI--NVKKSEHTDISCLVMAPTRELAVQISEVFKKI 96
Query: 422 GKFTGLTSAAILGGESIEQQ 481
G +T L + I GG E Q
Sbjct: 97 GAYTRLRTVCITGGVEQEAQ 116
Score = 37.5 bits (83), Expect = 0.38
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F+S L+ + K + + G+ +PT IQ K+IP L G+DV+ + G K
Sbjct: 3 FESYDLAPGIKKSLAEAGFNRPTDIQFKSIPPILAGEDVLAIAQTGTGK 51
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 66.1 bits (154), Expect = 1e-09
Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
+NIVVATPGR + L +++++ DE+DR+ ++GF ++ I A +P+ RQTLL
Sbjct: 123 ANIVVATPGRLYDFMSRGLINLTTVRMLILDESDRMLDMGFLPTIKRIIAAMPAERQTLL 182
Query: 685 FSATLP---KMLVE 717
FSATL K LVE
Sbjct: 183 FSATLESSVKQLVE 196
Score = 57.2 bits (132), Expect = 4e-07
Identities = 31/82 (37%), Positives = 49/82 (59%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TG+GKT F+LP ++ L +P +RALIL+PTRELALQ + ++ + TG+
Sbjct: 46 AQTGTGKTLAFLLPTIQLLSTEPRQP----GVRALILTPTRELALQINEALLQIARGTGI 101
Query: 440 TSAAILGGESIEQQFNVMSGSS 505
+A +GG + Q + G +
Sbjct: 102 RAAVAVGGLNERSQLRDIRGGA 123
Score = 38.7 bits (86), Expect = 0.17
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
F + LS + + K + +PTPIQ I AL GKD+V + G K L
Sbjct: 4 FSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALAGKDIVATAQTGTGKTL 54
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 66.1 bits (154), Expect = 1e-09
Identities = 34/80 (42%), Positives = 52/80 (65%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
++IVVATPGR + + +KL N VV DEAD + ++GF ++++ I LP RQTL+
Sbjct: 118 ASIVVATPGRLQDLLMSGKIKL-NPHFVVLDEADEMLDMGFLDEIKNIFTFLPKERQTLM 176
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSAT+P + + A L++P
Sbjct: 177 FSATMPNGIRKLAEQILNNP 196
Score = 50.0 bits (114), Expect = 7e-05
Identities = 28/84 (33%), Positives = 46/84 (54%)
Frame = +2
Query: 254 SMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT 433
+ A+TG+GKTA F LPI+ + + + L++ PTRELA+Q + GK +
Sbjct: 43 AQAQTGTGKTAAFGLPIMSMMKADGS-------VEGLVIVPTRELAMQVSDELFRFGKLS 95
Query: 434 GLTSAAILGGESIEQQFNVMSGSS 505
GL +A + GG + +Q + +S
Sbjct: 96 GLKTATVYGGTAYGKQIERIKQAS 119
Score = 37.9 bits (84), Expect = 0.29
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F L + + + G+K+P+P+Q+ IP+ L G D++ + G K
Sbjct: 3 FTDFNLKDTIQAAVAEAGFKEPSPVQKDAIPLVLEGHDMIAQAQTGTGK 51
>UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Victivallis vadensis ATCC BAA-548|Rep: DEAD/DEAH
box helicase domain protein - Victivallis vadensis ATCC
BAA-548
Length = 542
Score = 66.1 bits (154), Expect = 1e-09
Identities = 32/83 (38%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLP--SSRQTL 681
++V+ TPGR + LKL ++++V DEADR+ ++GF ++ I ++LP RQTL
Sbjct: 251 DLVIGTPGRIIDYSRGGSLKLSKVEVLVIDEADRMLDMGFIPDVKRIVSQLPRKGERQTL 310
Query: 682 LFSATLPKMLVEFARAGLSDPTL 750
LFSATL ++ A L++P +
Sbjct: 311 LFSATLEDHILRLASGWLAEPVI 333
Score = 62.9 bits (146), Expect = 9e-09
Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLV-PNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG 436
A+TG+GKTA F+L + +LL P + PG RAL+L+PTRELA+Q + L FTG
Sbjct: 169 AQTGTGKTAAFLLAVFTRLLNHPLEERKPGCP-RALVLAPTRELAMQIQKDAEVLEIFTG 227
Query: 437 LTSAAILGGESIEQQ 481
LTS + GG E+Q
Sbjct: 228 LTSVVVFGGMDHEKQ 242
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 66.1 bits (154), Expect = 1e-09
Identities = 33/87 (37%), Positives = 54/87 (62%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+I+VATPGR L + + + L ++I V DEADR+ ++GF ++ + LP+ +QTL F
Sbjct: 124 DILVATPGRLLDLQGQGFVDLSRLEIFVLDEADRMLDMGFLHDVRRVLKLLPAVKQTLFF 183
Query: 688 SATLPKMLVEFARAGLSDPTLDKIRVD 768
SAT+P +++ L +P K+ VD
Sbjct: 184 SATMPPEVMDLVNGLLKNPV--KVAVD 208
Score = 57.6 bits (133), Expect = 3e-07
Identities = 33/74 (44%), Positives = 42/74 (56%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TG+GKT F PIL++L G+ +R+LIL+PTRELALQ GK L
Sbjct: 45 AQTGTGKTCAFAAPILQRL---GGDIPAGRPIRSLILTPTRELALQIQESFEAYGKHLPL 101
Query: 440 TSAAILGGESIEQQ 481
SA I GG + Q
Sbjct: 102 RSAVIFGGVGQQPQ 115
Score = 49.2 bits (112), Expect = 1e-04
Identities = 21/49 (42%), Positives = 33/49 (67%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F+ +GL+ +LK + + GY++P+PIQ K IP AL G+DV+ + G K
Sbjct: 3 FRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGK 51
>UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1;
Erythrobacter sp. NAP1|Rep: Cold-shock dead-box protein
A - Erythrobacter sp. NAP1
Length = 598
Score = 66.1 bits (154), Expect = 1e-09
Identities = 35/77 (45%), Positives = 46/77 (59%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFS 690
IVV TPGR L L + VV DEAD + ++GF E L+EI P +R+TLLFS
Sbjct: 126 IVVGTPGRLRDHLERGALDLSGLIGVVLDEADEMLDMGFREDLEEILDATPDTRRTLLFS 185
Query: 691 ATLPKMLVEFARAGLSD 741
AT+P+ +V A+ SD
Sbjct: 186 ATMPQAIVRLAQKYQSD 202
Score = 40.3 bits (90), Expect = 0.054
Identities = 25/68 (36%), Positives = 36/68 (52%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TGSGKT F + + + +L + + L ++PTRELALQ R + L GL
Sbjct: 43 AQTGSGKTVAFGIALAQDILDQISGTPLQERPLVLAIAPTRELALQVSRELGWLYAKAGL 102
Query: 440 TSAAILGG 463
A +GG
Sbjct: 103 RIATCVGG 110
>UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 620
Score = 66.1 bits (154), Expect = 1e-09
Identities = 32/78 (41%), Positives = 48/78 (61%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFS 690
++VATPGR + I + L ++ V DE D + +LGF +Q+Q+I RL + RQT+LFS
Sbjct: 328 VIVATPGRMVEIISRQAVDLTHVIGCVVDEVDTMLQLGFEQQVQQILERLSNRRQTMLFS 387
Query: 691 ATLPKMLVEFARAGLSDP 744
AT+P + A L+ P
Sbjct: 388 ATIPPSIEAMASRLLNAP 405
Score = 47.2 bits (107), Expect = 5e-04
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPG----KNLRALILSPTRELALQTLRFVRE-LG 424
A TGSGKTA F+LP++ ++ K P + + LIL+PTREL +Q + +E +
Sbjct: 240 ASTGSGKTASFLLPMISRIHHITGKLLPSSPEVRFIYGLILAPTRELCMQIEKQTKEFVH 299
Query: 425 KFTGLTSAAILGGESIEQQFN 487
T + +A ++GG + Q +
Sbjct: 300 GMTNMRTALLIGGVPVPPQLH 320
Score = 38.3 bits (85), Expect = 0.22
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 168 KGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
K ++ GY PTPIQ + +P+ L+G+DV+ G K
Sbjct: 209 KNLSNHGYHSPTPIQMQVLPVLLSGRDVMVCASTGSGK 246
>UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein;
n=2; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 541
Score = 66.1 bits (154), Expect = 1e-09
Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICA--RLP--SSRQ 675
+IV+ATPGR + I + C+ L ++ ++ DEADR+ ++GF Q+QE+ +P RQ
Sbjct: 243 DIVIATPGRLIDILKQHCITLSEVRFLILDEADRMLDMGFEPQMQEVINGWDMPPADDRQ 302
Query: 676 TLLFSATLPKMLVEFAR 726
T+LFSAT P + AR
Sbjct: 303 TMLFSATFPDAVRNLAR 319
Score = 57.2 bits (132), Expect = 4e-07
Identities = 30/79 (37%), Positives = 45/79 (56%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
++TGSGKTA F+LP++ +L+ + P P + L PTRELA+Q R+ K T L
Sbjct: 165 SQTGSGKTAAFMLPVITQLIGTCHSPNPS----CVALCPTRELAIQIFEETRKFCKGTDL 220
Query: 440 TSAAILGGESIEQQFNVMS 496
+ + GG I +Q +S
Sbjct: 221 KTTCVFGGAPITEQIRNLS 239
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F G+ VL+ + GYK PTP+QR +IP L G+D++ + G K
Sbjct: 123 FPGCGIRNEVLRNVAHNGYKVPTPVQRYSIPYILNGEDLIVTSQTGSGK 171
>UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 491
Score = 66.1 bits (154), Expect = 1e-09
Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +1
Query: 508 NIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
N++VATPGR HI L+N+K+++ DEADR+ E G+ +QL I +PS RQT L
Sbjct: 151 NLLVATPGRLCDHILTTKDWSLENLKMLIIDEADRILEDGYKDQLHAIVEGIPSERQTAL 210
Query: 685 FSATLPKMLVEFA 723
FSAT K + + A
Sbjct: 211 FSATQTKDVSKIA 223
Score = 43.2 bits (97), Expect = 0.008
Identities = 27/78 (34%), Positives = 42/78 (53%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TGSGKT F++P ++ L N G + LI++PTRELA Q L K T +
Sbjct: 71 AKTGSGKTLAFLIPAIDLLFRKNATKKDGTIV--LIVAPTRELADQIFDVATLLLKDTEV 128
Query: 440 TSAAILGGESIEQQFNVM 493
+ A GG+ + + ++
Sbjct: 129 SFGAAYGGKEKKNETTLL 146
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 66.1 bits (154), Expect = 1e-09
Identities = 30/84 (35%), Positives = 51/84 (60%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+++VATPGR + + L I VV DEAD + +GF + ++ I + +P RQT+LF
Sbjct: 123 HVIVATPGRLIDHIERGTVDLGGISTVVLDEADEMLNMGFIDDIERILSHVPERRQTMLF 182
Query: 688 SATLPKMLVEFARAGLSDPTLDKI 759
SAT+ K ++ AR + +P + ++
Sbjct: 183 SATVSKPILRIARKYMRNPQVMRV 206
Score = 56.4 bits (130), Expect = 8e-07
Identities = 31/74 (41%), Positives = 45/74 (60%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TG+GKTA F +P+LE L + P +ALI+ PTREL LQ ++ +GK+ +
Sbjct: 48 AQTGTGKTAAFAIPVLENL---EAERVP----QALIICPTRELCLQVSEEIKRIGKYMKV 100
Query: 440 TSAAILGGESIEQQ 481
A+ GG+SI Q
Sbjct: 101 KVLAVYGGQSIGNQ 114
Score = 35.1 bits (77), Expect = 2.0
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F +S + + + G++ TPIQ T+P+ L G DVV + G K
Sbjct: 6 FSEFDISGDINRALDDMGFESTTPIQALTLPVTLDGMDVVGEAQTGTGK 54
>UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;
n=15; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
45 - Arabidopsis thaliana (Mouse-ear cress)
Length = 989
Score = 66.1 bits (154), Expect = 1e-09
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIV---VFDEADRLFELGFGEQLQEICARLPSSRQ 675
+ IVV TPGR + I K+ N++ V V DEADR+F++GF Q+ I + RQ
Sbjct: 520 TEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQ 579
Query: 676 TLLFSATLPKMLVEFARAGLSDP 744
T+LFSAT P+ + AR L+ P
Sbjct: 580 TVLFSATFPRQVETLARKVLNKP 602
Score = 54.8 bits (126), Expect = 2e-06
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +2
Query: 248 CCSMARTGSGKTACFVLPILEKLLVPNNKPTP-GKNLRALILSPTRELALQTLRFVRELG 424
C +A+TGSGKT FVLP+L + + P G L+++PTREL Q +R+
Sbjct: 436 CIGVAKTGSGKTLGFVLPMLRH--IKDQPPVEAGDGPIGLVMAPTRELVQQIYSDIRKFS 493
Query: 425 KFTGLTSAAILGGESIEQQFN 487
K G+ + GG + QQ +
Sbjct: 494 KALGIICVPVYGGSGVAQQIS 514
Score = 37.5 bits (83), Expect = 0.38
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +3
Query: 147 GLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
GL+ +L + K Y++P PIQ + +PI ++G+D + + G K L
Sbjct: 402 GLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTL 448
>UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;
n=1; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent
RNA helicase 27 - Arabidopsis thaliana (Mouse-ear cress)
Length = 633
Score = 66.1 bits (154), Expect = 1e-09
Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = +1
Query: 508 NIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
N++VATPGR L H+ N+K +V DEADR+ E F E L++I LP +RQT L
Sbjct: 278 NLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKILNLLPKTRQTSL 337
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSAT + + AR L+ P
Sbjct: 338 FSATQSAKVEDLARVSLTSP 357
Score = 58.0 bits (134), Expect = 3e-07
Identities = 30/79 (37%), Positives = 47/79 (59%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
ARTGSGKT F++P +E L+ K TP L++ PTRELA+Q+ +EL K+
Sbjct: 198 ARTGSGKTLAFLIPAVE--LLYRVKFTPRNGTGVLVICPTRELAIQSYGVAKELLKYHSQ 255
Query: 440 TSAAILGGESIEQQFNVMS 496
T ++GGE + + +++
Sbjct: 256 TVGKVIGGEKRKTEAEILA 274
Score = 35.5 bits (78), Expect = 1.5
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
F+S+ LS K I + G+ + T IQ K IP + G+DV+ G K L
Sbjct: 156 FESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTL 206
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 66.1 bits (154), Expect = 1e-09
Identities = 32/77 (41%), Positives = 46/77 (59%)
Frame = +2
Query: 251 CSMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF 430
C+ A TG+GKTA F LP+LE+L+ KP R L+L PTREL +Q R+L +F
Sbjct: 259 CACAATGTGKTAAFALPVLERLIY---KPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQF 315
Query: 431 TGLTSAAILGGESIEQQ 481
+T+ +GG ++ Q
Sbjct: 316 CNITTCLAVGGLDVKSQ 332
Score = 59.3 bits (137), Expect = 1e-07
Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Frame = +1
Query: 508 NIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
+I++ATPGR + H+ L +I++++ DEADR+ + F EQ++EI RQT+L
Sbjct: 341 DILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSHHRQTML 400
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSAT+ + + A L +P
Sbjct: 401 FSATMTDEVKDLASVSLKNP 420
Score = 57.6 bits (133), Expect = 3e-07
Identities = 27/74 (36%), Positives = 38/74 (51%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQLVXXXXXXR 311
+FQ M LS P+LK IT G+KQPTPIQ+ IP+ L GKD+ G K
Sbjct: 219 SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLE 278
Query: 312 NFLFRTTNLHLERI 353
+++ + R+
Sbjct: 279 RLIYKPRQAPVTRV 292
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/80 (41%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCL-KLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
++V+ATPGR L + I+ CL K+D++++VV DEAD+L F + ++ LP +RQ LL
Sbjct: 202 HVVIATPGRILDL-IKKCLEKVDHVQMVVLDEADKLLSQDFVQIMEAFILTLPKNRQILL 260
Query: 685 FSATLPKMLVEFARAGLSDP 744
+SAT P + +F + L P
Sbjct: 261 YSATFPLSVQKFMNSHLQKP 280
Score = 42.7 bits (96), Expect = 0.010
Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+ G+GK+ +++P+LE+L + + N++A+++ PTRELALQ + ++ K G
Sbjct: 125 AKNGTGKSGAYLIPLLERLDLKKD------NIQAMVIVPTRELALQVSQICIQVSKHMGG 178
Query: 440 TSA-AILGGESI 472
A GG ++
Sbjct: 179 AKVMATTGGTNL 190
Score = 33.9 bits (74), Expect = 4.7
Identities = 18/49 (36%), Positives = 31/49 (63%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F+ L +L GI + G+ +P+ IQ ++IPIAL+G+D++ + G K
Sbjct: 84 FEDYCLKRELLIGIFEMGW-EPSSIQEESIPIALSGRDILARAKNGTGK 131
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 65.7 bits (153), Expect = 1e-09
Identities = 31/85 (36%), Positives = 51/85 (60%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
+ +VV TPGR L L+L +++ V DEAD + ++GF E ++ I + +P Q+
Sbjct: 125 AQVVVGTPGRILDHINRGTLQLGVVRMTVLDEADEMLDMGFREDIERILSEMPEWVQSAF 184
Query: 685 FSATLPKMLVEFARAGLSDPTLDKI 759
FSAT+P ++E AR L +P L ++
Sbjct: 185 FSATMPDGILELARRFLREPELLRV 209
Score = 53.2 bits (122), Expect = 7e-06
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGK-FTG 436
A+TG+GKTA F LP+L+++ ++++AL+L PTRELALQ + L K G
Sbjct: 49 AQTGTGKTAAFGLPLLQRI------DAADRSVQALVLCPTRELALQVANGLTALAKHLRG 102
Query: 437 LTSAAILGGESIEQQFNVM 493
+ ++ GG+ IE Q + +
Sbjct: 103 VRILSVYGGQPIEPQASAL 121
Score = 38.3 bits (85), Expect = 0.22
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+F+ + L +LK I + G+ +P+PIQ IP L G+DV+ + G K
Sbjct: 6 SFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGK 55
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/83 (39%), Positives = 48/83 (57%)
Frame = +1
Query: 514 VVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFSA 693
VV TPGR + LKL+ I+ VV DEAD + +GF + + + ++P RQ LFSA
Sbjct: 129 VVGTPGRVMDHIRRGTLKLEGIRAVVLDEADEMLRMGFIDDVDWVLDQVPEKRQIALFSA 188
Query: 694 TLPKMLVEFARAGLSDPTLDKIR 762
T+PK + A L +PT +I+
Sbjct: 189 TMPKQIKAVAEKHLREPTEIRIK 211
Score = 53.6 bits (123), Expect = 5e-06
Identities = 25/53 (47%), Positives = 36/53 (67%)
Frame = +3
Query: 123 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
SS F S+GL F +L+ I ++GY+QP+PIQ ++IP L GKDV+ + G K
Sbjct: 4 SSTGFASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGK 56
Score = 47.6 bits (108), Expect = 4e-04
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF-T 433
+A+TG+GKTA F LP+L + +P + L+L+PTRELA Q V K +
Sbjct: 49 LAQTGTGKTAAFTLPLLARTQNEVREP------QVLVLAPTRELAQQVAMAVESYSKHES 102
Query: 434 GLTSAAILGGESIEQQFNVM 493
+ A+I GG QF +
Sbjct: 103 NVKVASIYGGSDFGSQFRAL 122
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 65.7 bits (153), Expect = 1e-09
Identities = 31/73 (42%), Positives = 48/73 (65%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+IVV TPGR + L L +++ +V DEADR+ ++GF + + EI R +++T LF
Sbjct: 140 DIVVGTPGRIIDHLNRDTLDLSHVEYLVLDEADRMLDMGFLDDVLEIIKRTGENKRTFLF 199
Query: 688 SATLPKMLVEFAR 726
SAT+PK +V+ AR
Sbjct: 200 SATMPKEIVDIAR 212
Score = 56.4 bits (130), Expect = 8e-07
Identities = 30/77 (38%), Positives = 49/77 (63%)
Frame = +2
Query: 254 SMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT 433
+ A+TG+GKTA F +P+LE++ NK ++A+I++PTRELALQ ++ L
Sbjct: 61 AQAQTGTGKTAAFGIPLLERIDFKANK-----FVKAIIVTPTRELALQIFEELKSLKGTK 115
Query: 434 GLTSAAILGGESIEQQF 484
+ + GG+S+E+QF
Sbjct: 116 RVKITTLYGGQSLEKQF 132
Score = 42.7 bits (96), Expect = 0.010
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIAL-TGKDVVQWPELGPEK 281
F+ GLS +L I K+GY++PT IQ+ +P AL T KD++ + G K
Sbjct: 20 FEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTDKDLIAQAQTGTGK 69
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 65.7 bits (153), Expect = 1e-09
Identities = 29/74 (39%), Positives = 48/74 (64%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
++VVATPGR +H + L+LD+++ +V DEAD + +GF E ++++ P R L+F
Sbjct: 123 DLVVATPGRCIHFIEDGKLELDSLEYLVLDEADEMLNMGFVEDVEKVLKASPDDRTVLMF 182
Query: 688 SATLPKMLVEFARA 729
SAT+P L + A +
Sbjct: 183 SATMPPRLKKIAES 196
Score = 55.6 bits (128), Expect = 1e-06
Identities = 32/74 (43%), Positives = 44/74 (59%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TG+GKTA F LPI++K+ KP +ALIL PTRELA+Q ++ K G+
Sbjct: 47 AQTGTGKTAAFGLPIVQKIEPGLKKP------QALILCPTRELAIQVNEEIKSFCKGRGI 100
Query: 440 TSAAILGGESIEQQ 481
T+ + GG I Q
Sbjct: 101 TTVTLYGGAPIMDQ 114
Score = 33.9 bits (74), Expect = 4.7
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALT-GKDVVQWPELGPEK 281
F ++GL + + + +G+K+P+PIQ + IP+ L+ D++ + G K
Sbjct: 4 FTALGLEPWITQCLEAKGFKEPSPIQEQAIPVLLSQDHDIIGQAQTGTGK 53
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 65.7 bits (153), Expect = 1e-09
Identities = 32/88 (36%), Positives = 54/88 (61%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
+ ++V TPGR L + LKLD +K +V DEAD + +GF + ++ I A+ P + Q L
Sbjct: 144 AQVIVGTPGRMLDHLRKGTLKLDGLKALVLDEADEMLRMGFIDDVEAILAKTPDTCQRAL 203
Query: 685 FSATLPKMLVEFARAGLSDPTLDKIRVD 768
FSAT+P + + A+ L + T ++R++
Sbjct: 204 FSATMPPQIKKVAQTYLKNAT--EVRIE 229
Score = 46.8 bits (106), Expect = 6e-04
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLR-FVRELGKFT 433
+A+TG+GKTA F LP+L + + N P + L+L+PTRELA+Q F KF
Sbjct: 67 VAQTGTGKTAAFALPLLSR--IDANVAEP----QILVLAPTRELAIQVAEAFTTYASKFR 120
Query: 434 GLTSAAILGGESIEQQ 481
I GG+ Q
Sbjct: 121 NFHVLPIYGGQDFSPQ 136
Score = 37.5 bits (83), Expect = 0.38
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+F +GL VL+ ++ GY+ P+PIQ ++IP L G ++ + G K
Sbjct: 25 SFAELGLDPAVLEAVSAVGYETPSPIQAQSIPALLAGNHLLGVAQTGTGK 74
>UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 523
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/78 (42%), Positives = 49/78 (62%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFS 690
IV+ATPGR + + L I +V DEADR+ ++GF Q+++I +++ RQTL +S
Sbjct: 193 IVIATPGRLIDMIESHHTNLRRITYLVLDEADRMLDMGFEPQIKKIVSQIRPDRQTLYWS 252
Query: 691 ATLPKMLVEFARAGLSDP 744
AT PK + + AR L DP
Sbjct: 253 ATWPKEVEQLARNFLFDP 270
Score = 44.8 bits (101), Expect = 0.003
Identities = 22/51 (43%), Positives = 32/51 (62%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
F+ +G VL+ ITK G+ +PTPIQ + P+AL G+D++ E G K L
Sbjct: 95 FRDVGFPEYVLQEITKAGFVEPTPIQSQGWPMALRGRDLIGIAETGSGKTL 145
Score = 39.5 bits (88), Expect = 0.095
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKP--TPGKNLRALILSPTRELALQTLRFVRELG 424
+A TGSGKT ++LP + + N +P PG L+L+PTRELA+Q + + G
Sbjct: 136 IAETGSGKTLAYLLPAIVHV---NAQPILAPGDGPIVLVLAPTRELAVQIQQEATKFG 190
>UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05414 protein - Schistosoma
japonicum (Blood fluke)
Length = 325
Score = 65.7 bits (153), Expect = 1e-09
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Frame = +1
Query: 511 IVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
I+VATPGR L H+ N+K +V DEADRL ++GF ++++I LP+ RQT+LF
Sbjct: 175 ILVATPGRLLDHLTNTKFFLRHNLKALVIDEADRLLDIGFEVEMRQIIKLLPTVRQTMLF 234
Query: 688 SATLPKMLVEFARAGL 735
SATL + A A L
Sbjct: 235 SATLNEKTKNLANAAL 250
Score = 62.5 bits (145), Expect = 1e-08
Identities = 39/96 (40%), Positives = 58/96 (60%), Gaps = 6/96 (6%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TGSGKT F++P++E +L +P G A+I+SPTREL+LQT + EL +FT L
Sbjct: 94 AKTGSGKTLAFLIPVVELMLSLGLQPRNGTG--AIIISPTRELSLQTYGVLTELIQFTNL 151
Query: 440 TSAAILGGESIEQQF-NVMSG-----SSPT*LLQHL 529
I+GG + + + N+ G ++P LL HL
Sbjct: 152 RIGLIMGGSNRQTEAQNLEKGVTILVATPGRLLDHL 187
>UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Rep:
DEAD-box helicase 2 - Plasmodium falciparum
Length = 562
Score = 65.7 bits (153), Expect = 1e-09
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Frame = +1
Query: 508 NIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
N++V+TPGR L H+ L N+K +VFDEAD+L F + ++ LP +R T L
Sbjct: 276 NVIVSTPGRILDHLNNTKGFNLKNLKYLVFDEADKLLSQDFESSINKLLLILPPNRITFL 335
Query: 685 FSATLPKMLVEFARAGLSDPTLDKIRVDWKLPSTL 789
FSAT+ K + + +A L +P ++ + STL
Sbjct: 336 FSATMTKNVAKLKKACLKNPVKVEVSNKYSTVSTL 370
Score = 54.8 bits (126), Expect = 2e-06
Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 6/97 (6%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG 436
++ TGSGKTACF++PIL+ L V NK ++ AL++SPTREL +Q + + LG
Sbjct: 199 LSETGSGKTACFIIPILQDLKV--NK----QSFYALVISPTRELCIQISQNFQALGMNLL 252
Query: 437 LTSAAILGG-ESIEQQFNVMSG-----SSPT*LLQHL 529
+ I GG + + Q N+ S+P +L HL
Sbjct: 253 INICTIYGGVDIVTQSLNLAKKPNVIVSTPGRILDHL 289
Score = 39.1 bits (87), Expect = 0.13
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F+ + + +L+ I + G+K+PT IQR+ +P A KD++ E G K
Sbjct: 158 FEDLNICEEILESIKELGWKKPTEIQREILPHAFLKKDIIGLSETGSGK 206
>UniRef50_A7AWS5 Cluster: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; n=1;
Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 454
Score = 65.7 bits (153), Expect = 1e-09
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Frame = +1
Query: 508 NIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
+++VA+PGR H+ L +K +V DEADRL F E+L +I +P+ RQT L
Sbjct: 152 HVIVASPGRLADHVENTKGFSLSTVKKLVIDEADRLLSQDFDEELDKIIHAMPTERQTFL 211
Query: 685 FSATLPKMLVEFARAGLSDPTLDKIRVDWK 774
FSAT+ K L + + L DP ++VD K
Sbjct: 212 FSATMTKKLSKLQKMALKDPI--SVQVDDK 239
Score = 41.5 bits (93), Expect = 0.024
Identities = 25/80 (31%), Positives = 39/80 (48%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG 436
+A TGSGKT F +P+L LL + + ++L+P+REL Q R L
Sbjct: 75 LAVTGSGKTGAFTIPVLHHLL------EDVQRIYCVVLAPSRELCEQIAEQFRALSSSIA 128
Query: 437 LTSAAILGGESIEQQFNVMS 496
L I+GG + Q + ++
Sbjct: 129 LQVCVIIGGVDMVHQASALA 148
>UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA
helicase 40; n=2; core eudicotyledons|Rep: Probable
DEAD-box ATP-dependent RNA helicase 40 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1088
Score = 65.7 bits (153), Expect = 1e-09
Identities = 35/89 (39%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
++IVVATPGR I + + ++V DEADR+ ++GF Q+++I +P RQTL+
Sbjct: 558 ADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLM 617
Query: 685 FSATLPKMLVEFARAGLSDPTLDKI-RVD 768
++AT PK + + A L +P I RVD
Sbjct: 618 YTATWPKEVRKIASDLLVNPVQVNIGRVD 646
Score = 44.0 bits (99), Expect = 0.004
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
F+S GL +L+ + G+ PTPIQ +T PIAL +D+V + G K L
Sbjct: 437 FESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTL 487
Score = 39.9 bits (89), Expect = 0.072
Identities = 24/70 (34%), Positives = 37/70 (52%)
Frame = +2
Query: 254 SMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT 433
++A+TGSGKT +++P L N G + LIL+PTRELA Q G+ +
Sbjct: 477 AIAKTGSGKTLGYLIPAFILLRHCRNDSRNGPTV--LILAPTRELATQIQDEALRFGRSS 534
Query: 434 GLTSAAILGG 463
++ + GG
Sbjct: 535 RISCTCLYGG 544
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 701,133,599
Number of Sequences: 1657284
Number of extensions: 13005972
Number of successful extensions: 36057
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 32135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34931
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67908372675
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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