Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021045
(794 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 123 2e-28
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 123 2e-28
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 74 1e-13
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 69 4e-12
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 63 2e-10
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 63 2e-10
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 63 2e-10
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 63 2e-10
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 63 2e-10
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 63 2e-10
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 63 3e-10
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 61 8e-10
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 61 8e-10
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 61 8e-10
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 61 8e-10
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 61 8e-10
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 61 1e-09
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 61 1e-09
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 61 1e-09
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 60 1e-09
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 60 2e-09
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 59 3e-09
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 58 5e-09
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 58 5e-09
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 58 1e-08
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 58 1e-08
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 57 2e-08
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 57 2e-08
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 57 2e-08
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 56 4e-08
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 56 4e-08
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 56 4e-08
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 55 5e-08
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 55 5e-08
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 54 9e-08
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 54 2e-07
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 54 2e-07
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 54 2e-07
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 52 4e-07
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 52 4e-07
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 51 1e-06
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 50 2e-06
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 50 2e-06
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 49 3e-06
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 49 4e-06
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 43 2e-04
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 41 9e-04
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 37 0.019
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 37 0.019
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 37 0.019
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 33 0.31
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 30 1.7
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 29 2.9
Z68341-4|CAA92767.2| 1266|Caenorhabditis elegans Hypothetical pr... 29 3.8
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 29 3.8
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 123 bits (296), Expect = 2e-28
Identities = 58/94 (61%), Positives = 75/94 (79%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+I++ATPGR LH+ +EM L+L ++ VVFDEADRLFE+GF +QL E R+P SRQTLLF
Sbjct: 145 DILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQDQLTETLKRIPESRQTLLF 204
Query: 688 SATLPKMLVEFARAGLSDPTLDKIRVDWKLPSTL 789
SATLPKMLV+FA+AGL+DP L ++ VD K+ L
Sbjct: 205 SATLPKMLVDFAKAGLTDPMLVRLDVDEKVSDKL 238
Score = 92.7 bits (220), Expect = 3e-19
Identities = 46/87 (52%), Positives = 66/87 (75%)
Frame = +2
Query: 233 IDRERCCSMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFV 412
+D + +M+RTGSGKTA FV+P+L+KL + T G +RAL++SPTRELALQT + V
Sbjct: 59 MDGKDVVAMSRTGSGKTAAFVIPMLQKL---KRRDTTG--IRALMVSPTRELALQTFKVV 113
Query: 413 RELGKFTGLTSAAILGGESIEQQFNVM 493
+ELG+FTGL A ++GG+ IE+QF+ +
Sbjct: 114 KELGRFTGLRCACLVGGDQIEEQFSTI 140
Score = 58.8 bits (136), Expect = 4e-09
Identities = 27/52 (51%), Positives = 33/52 (63%)
Frame = +3
Query: 126 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+G +Q +GL V K I K+G+ QPTPIQRKTIP + GKDVV G K
Sbjct: 23 AGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGK 74
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 123 bits (296), Expect = 2e-28
Identities = 58/94 (61%), Positives = 75/94 (79%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+I++ATPGR LH+ +EM L+L ++ VVFDEADRLFE+GF +QL E R+P SRQTLLF
Sbjct: 145 DILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQDQLTETLKRIPESRQTLLF 204
Query: 688 SATLPKMLVEFARAGLSDPTLDKIRVDWKLPSTL 789
SATLPKMLV+FA+AGL+DP L ++ VD K+ L
Sbjct: 205 SATLPKMLVDFAKAGLTDPMLVRLDVDEKVSDKL 238
Score = 92.7 bits (220), Expect = 3e-19
Identities = 46/87 (52%), Positives = 66/87 (75%)
Frame = +2
Query: 233 IDRERCCSMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFV 412
+D + +M+RTGSGKTA FV+P+L+KL + T G +RAL++SPTRELALQT + V
Sbjct: 59 MDGKDVVAMSRTGSGKTAAFVIPMLQKL---KRRDTTG--IRALMVSPTRELALQTFKVV 113
Query: 413 RELGKFTGLTSAAILGGESIEQQFNVM 493
+ELG+FTGL A ++GG+ IE+QF+ +
Sbjct: 114 KELGRFTGLRCACLVGGDQIEEQFSTI 140
Score = 58.8 bits (136), Expect = 4e-09
Identities = 27/52 (51%), Positives = 33/52 (63%)
Frame = +3
Query: 126 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+G +Q +GL V K I K+G+ QPTPIQRKTIP + GKDVV G K
Sbjct: 23 AGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGK 74
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 73.7 bits (173), Expect = 1e-13
Identities = 35/80 (43%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Frame = +1
Query: 508 NIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
NI+V TPGR L H+ + D+++++V DEADR+ ++GF +QL I LP+ RQTLL
Sbjct: 199 NIIVCTPGRLLQHMDENAQMSCDSLQVLVLDEADRMLDMGFSKQLNSIINNLPAERQTLL 258
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSAT + + + R +DP
Sbjct: 259 FSATQTRNVKDLCRVCTNDP 278
Score = 67.7 bits (158), Expect = 9e-12
Identities = 40/95 (42%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TGSGKT V+P+LE L K +P L ALI+SPTRELALQT + +G G
Sbjct: 120 AKTGSGKTLALVIPVLEALW--RAKWSPDYGLGALIISPTRELALQTFSTINAVGAHHGF 177
Query: 440 TSAAILGGESIEQQFNVMSG-----SSPT*LLQHL 529
+ ++GG + + N +SG +P LLQH+
Sbjct: 178 SCGLVIGGSDVAFERNRISGINIIVCTPGRLLQHM 212
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
F+ LS+ L+G+ Y +PT IQR TI +LTG DVV + G K L
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTL 128
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 68.9 bits (161), Expect = 4e-12
Identities = 32/79 (40%), Positives = 52/79 (65%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+IVVATPGR + + + L+ + +V DEADR+ ++GF ++++ I + RQTLLF
Sbjct: 324 HIVVATPGRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFEDEIKSIFYFFKAQRQTLLF 383
Query: 688 SATLPKMLVEFARAGLSDP 744
SAT+P+ + FA++ L P
Sbjct: 384 SATMPRKIQFFAKSALVKP 402
Score = 33.5 bits (73), Expect = 0.18
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNK-P-TPGKNLRALILSPTRELALQTLRFVREL 421
+A TGSGKT FVLP++ L K P + LI+ P+RELA Q + E+
Sbjct: 233 IASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLIIEM 289
Score = 31.9 bits (69), Expect = 0.54
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +3
Query: 129 GAFQSMGLSFPVLKGITK-RGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
G+F M +L+ + K +G PT IQ + IP+AL+G+D++ G K +
Sbjct: 189 GSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTM 242
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 63.3 bits (147), Expect = 2e-10
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Frame = +1
Query: 508 NIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
+I+VATPGR + H+ L +K ++ DEADR+ + F +L +I +P R+T L
Sbjct: 164 HIIVATPGRLVDHLENTKGFNLKALKFLIMDEADRILNMDFEVELDKILKVIPRERRTYL 223
Query: 685 FSATLPKMLVEFARAGLSDPTLDKIRVDWKLPSTL 789
FSAT+ K + + RA L DP + +K L
Sbjct: 224 FSATMTKKVSKLERASLRDPARVSVSSRYKTVDNL 258
Score = 52.0 bits (119), Expect = 5e-07
Identities = 31/75 (41%), Positives = 43/75 (57%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG 436
+A TGSGKT F +P+L+ LL + P + L+L+PTRELA Q + LG G
Sbjct: 87 LAETGSGKTGAFAIPVLQSLL---DHP---QAFFCLVLTPTRELAFQIGQQFEALGSGIG 140
Query: 437 LTSAAILGGESIEQQ 481
L +A I+GG + Q
Sbjct: 141 LIAAVIVGGVDMAAQ 155
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 63.3 bits (147), Expect = 2e-10
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 5/84 (5%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFE-LGFGEQLQEIC--ARLP--SS 669
+ I+V T GR H C E +KLD + V DEADR+ + +GFG ++ I +P +
Sbjct: 469 ATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKEN 528
Query: 670 RQTLLFSATLPKMLVEFARAGLSD 741
RQTL+FSAT P + E ARA L +
Sbjct: 529 RQTLMFSATFPDSVQEAARAFLRE 552
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKN---LRALILSPTRELALQTLRFVRELGKF 430
A+TGSGKTA F+LPI+ +L+ NN T G+ R +IL+PTRELA Q R+
Sbjct: 385 AQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQ 444
Query: 431 TGLTSAAILGGESI 472
T + + GG ++
Sbjct: 445 TMMEIKPVYGGLAV 458
Score = 31.9 bits (69), Expect = 0.54
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F L+ + K + GY + TPIQ+ +P+ G D++ + G K
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGK 391
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 63.3 bits (147), Expect = 2e-10
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 5/84 (5%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFE-LGFGEQLQEIC--ARLP--SS 669
+ I+V T GR H C E +KLD + V DEADR+ + +GFG ++ I +P +
Sbjct: 469 ATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKEN 528
Query: 670 RQTLLFSATLPKMLVEFARAGLSD 741
RQTL+FSAT P + E ARA L +
Sbjct: 529 RQTLMFSATFPDSVQEAARAFLRE 552
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKN---LRALILSPTRELALQTLRFVRELGKF 430
A+TGSGKTA F+LPI+ +L+ NN T G+ R +IL+PTRELA Q R+
Sbjct: 385 AQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQ 444
Query: 431 TGLTSAAILGGESI 472
T + + GG ++
Sbjct: 445 TMMEIKPVYGGLAV 458
Score = 31.9 bits (69), Expect = 0.54
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F L+ + K + GY + TPIQ+ +P+ G D++ + G K
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGK 391
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 63.3 bits (147), Expect = 2e-10
Identities = 37/92 (40%), Positives = 56/92 (60%), Gaps = 9/92 (9%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFE-LGFGEQLQEIC--ARLPSS--RQ 675
I+V T GR H C + +KLD + +V DEADR+ + +GFG ++++I +P + RQ
Sbjct: 428 IIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQIINYKNMPKNDKRQ 487
Query: 676 TLLFSATLPKMLVEFARAGLSDP----TLDKI 759
T++FSAT P + E AR L + T+DKI
Sbjct: 488 TMMFSATFPSSVQEAARKLLREDYTMITIDKI 519
Score = 46.0 bits (104), Expect = 3e-05
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Frame = +2
Query: 236 DRERCCSMARTGSGKTACFVLPILEKLLVP---NNKPTPGKNLRALILSPTRELALQTLR 406
D + + A+TGSGKTA F+LPI+ +L++ N G R +IL+PTRELA Q
Sbjct: 334 DGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYN 393
Query: 407 FVRELGKFTGLTSAAILGGESI 472
R+ + + + GG ++
Sbjct: 394 EGRKFSYQSVMEIKPVYGGINV 415
Score = 35.5 bits (78), Expect = 0.044
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+F + + + + + GY + TPIQ+ T+P+ GKD++ + G K
Sbjct: 299 SFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGK 348
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 63.3 bits (147), Expect = 2e-10
Identities = 37/92 (40%), Positives = 56/92 (60%), Gaps = 9/92 (9%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFE-LGFGEQLQEIC--ARLPSS--RQ 675
I+V T GR H C + +KLD + +V DEADR+ + +GFG ++++I +P + RQ
Sbjct: 428 IIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQIINYKNMPKNDKRQ 487
Query: 676 TLLFSATLPKMLVEFARAGLSDP----TLDKI 759
T++FSAT P + E AR L + T+DKI
Sbjct: 488 TMMFSATFPSSVQEAARKLLREDYTMITIDKI 519
Score = 46.0 bits (104), Expect = 3e-05
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Frame = +2
Query: 236 DRERCCSMARTGSGKTACFVLPILEKLLVP---NNKPTPGKNLRALILSPTRELALQTLR 406
D + + A+TGSGKTA F+LPI+ +L++ N G R +IL+PTRELA Q
Sbjct: 334 DGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYN 393
Query: 407 FVRELGKFTGLTSAAILGGESI 472
R+ + + + GG ++
Sbjct: 394 EGRKFSYQSVMEIKPVYGGINV 415
Score = 35.5 bits (78), Expect = 0.044
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+F + + + + + GY + TPIQ+ T+P+ GKD++ + G K
Sbjct: 299 SFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGK 348
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 63.3 bits (147), Expect = 2e-10
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 5/84 (5%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFE-LGFGEQLQEIC--ARLP--SS 669
+ I+V T GR H C E +KLD + V DEADR+ + +GFG ++ I +P +
Sbjct: 469 ATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKEN 528
Query: 670 RQTLLFSATLPKMLVEFARAGLSD 741
RQTL+FSAT P + E ARA L +
Sbjct: 529 RQTLMFSATFPDSVQEAARAFLRE 552
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKN---LRALILSPTRELALQTLRFVRELGKF 430
A+TGSGKTA F+LPI+ +L+ NN T G+ R +IL+PTRELA Q R+
Sbjct: 385 AQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQ 444
Query: 431 TGLTSAAILGGESI 472
T + + GG ++
Sbjct: 445 TMMEIKPVYGGLAV 458
Score = 31.9 bits (69), Expect = 0.54
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F L+ + K + GY + TPIQ+ +P+ G D++ + G K
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGK 391
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 62.9 bits (146), Expect = 3e-10
Identities = 33/77 (42%), Positives = 45/77 (58%)
Frame = +2
Query: 251 CSMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF 430
C+ A TG+GKTA FVLPILE+++ +P R L+L PTRELA+Q + R+L F
Sbjct: 189 CACAATGTGKTAAFVLPILERMIY---RPKGASCTRVLVLVPTRELAIQVFQVFRKLSTF 245
Query: 431 TGLTSAAILGGESIEQQ 481
L GG ++ Q
Sbjct: 246 IQLEVCLCAGGLDLKAQ 262
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/60 (41%), Positives = 37/60 (61%)
Frame = +1
Query: 565 KLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFSATLPKMLVEFARAGLSDP 744
K+ N +++V DEADR+ E F +Q+ E+ +RQTLLFSAT+ + + E A L P
Sbjct: 315 KIPNFQVLVLDEADRMLEEAFRDQMNELIRLCAQNRQTLLFSATMTEEIDELASMSLQKP 374
Score = 52.0 bits (119), Expect = 5e-07
Identities = 25/74 (33%), Positives = 35/74 (47%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQLVXXXXXXR 311
+F+ M LS +LK + GY PTPIQ+ IP+ALTGKD+ G K
Sbjct: 149 SFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILE 208
Query: 312 NFLFRTTNLHLERI 353
++R R+
Sbjct: 209 RMIYRPKGASCTRV 222
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 61.3 bits (142), Expect = 8e-10
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLF-ELGFGEQLQEICARLPSSRQTLL 684
+IVV TPGR L + LKLD +K V DE D++ + +QEI P +Q ++
Sbjct: 163 HIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMM 222
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSATLPK L + + DP
Sbjct: 223 FSATLPKELRTVCKRFMQDP 242
Score = 37.1 bits (82), Expect = 0.014
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF-TG 436
A++G GKTA FV+ L++L +P G+ + + + TRELA Q + K+ G
Sbjct: 85 AKSGMGKTAVFVITTLQQL-----EPVDGE-VSVVCMCHTRELAFQISKEYERFSKYLPG 138
Query: 437 LTSAAILGGESIEQQFNVMSGSSP 508
+ A GG +I++ ++ P
Sbjct: 139 VKVAVFFGGMAIKKDEERLANDCP 162
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 61.3 bits (142), Expect = 8e-10
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFE-LGFGEQLQEIC--ARLP--SS 669
+ I+V T GR H C E +KLD + V DEADR+ + +GFG + I +P +
Sbjct: 680 ATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKEN 739
Query: 670 RQTLLFSATLPKMLVEFARAGLSD 741
RQTL+FSAT P + E AR L +
Sbjct: 740 RQTLMFSATFPDSVQEAARNHLKE 763
Score = 49.6 bits (113), Expect = 3e-06
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKN---LRALILSPTRELALQTLRFVRELGKF 430
A+TGSGKTA F+LPI+ +L+ N+ T G+ R +IL+PTREL Q R+
Sbjct: 596 AQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQ 655
Query: 431 TGLTSAAILGGESI 472
T + + GG ++
Sbjct: 656 TMMEIRPVYGGLAV 669
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F L + K + GY + TPIQ+ T+P+ G D++ + G K
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGK 602
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 61.3 bits (142), Expect = 8e-10
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFE-LGFGEQLQEIC--ARLP--SS 669
+ I+V T GR H C E +KLD + V DEADR+ + +GFG + I +P +
Sbjct: 680 ATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKEN 739
Query: 670 RQTLLFSATLPKMLVEFARAGLSD 741
RQTL+FSAT P + E AR L +
Sbjct: 740 RQTLMFSATFPDSVQEAARNHLKE 763
Score = 49.6 bits (113), Expect = 3e-06
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKN---LRALILSPTRELALQTLRFVRELGKF 430
A+TGSGKTA F+LPI+ +L+ N+ T G+ R +IL+PTREL Q R+
Sbjct: 596 AQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQ 655
Query: 431 TGLTSAAILGGESI 472
T + + GG ++
Sbjct: 656 TMMEIRPVYGGLAV 669
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F L + K + GY + TPIQ+ T+P+ G D++ + G K
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGK 602
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 61.3 bits (142), Expect = 8e-10
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIV---VFDEADRLFELGFGEQLQEICARLPSSRQ 675
+ IVV TPGR + + K+ N++ V V DEADR+F+ GF Q+ ++ + +Q
Sbjct: 428 AEIVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDKGFEPQIMKVVNNIRPDKQ 487
Query: 676 TLLFSATLPKMLVEFARAGLSDP 744
T+LFSAT P+ + AR L P
Sbjct: 488 TVLFSATFPRHMEALARKVLDKP 510
Score = 55.2 bits (127), Expect = 5e-08
Identities = 31/75 (41%), Positives = 43/75 (57%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG 436
+A+TGSGKT F+LP+ +L + G A+IL+PTRELA+QT + + K G
Sbjct: 347 IAKTGSGKTLAFLLPMFRHIL-DQPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLG 405
Query: 437 LTSAAILGGESIEQQ 481
L A GG I +Q
Sbjct: 406 LKVACTYGGVGISEQ 420
Score = 35.1 bits (77), Expect = 0.058
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +3
Query: 147 GLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQLVXXXXXXRNFL 320
G++ ++ + K Y +PT IQ + IP ++G+DV+ + G K L R+ L
Sbjct: 310 GVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHIL 367
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 61.3 bits (142), Expect = 8e-10
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFE-LGFGEQLQEIC--ARLP--SS 669
+ I+V T GR H C E +KLD + V DEADR+ + +GFG + I +P +
Sbjct: 680 ATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKEN 739
Query: 670 RQTLLFSATLPKMLVEFARAGLSD 741
RQTL+FSAT P + E AR L +
Sbjct: 740 RQTLMFSATFPDSVQEAARNHLKE 763
Score = 49.6 bits (113), Expect = 3e-06
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKN---LRALILSPTRELALQTLRFVRELGKF 430
A+TGSGKTA F+LPI+ +L+ N+ T G+ R +IL+PTREL Q R+
Sbjct: 596 AQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQ 655
Query: 431 TGLTSAAILGGESI 472
T + + GG ++
Sbjct: 656 TMMEIRPVYGGLAV 669
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F L + K + GY + TPIQ+ T+P+ G D++ + G K
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGK 602
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 60.9 bits (141), Expect = 1e-09
Identities = 29/66 (43%), Positives = 41/66 (62%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
+IVVATPGR L + +V DEADR+ ++GF Q+++I ++ RQTL+F
Sbjct: 254 DIVVATPGRLLDFLDNGTTNMKKCSYLVLDEADRMLDMGFEPQIKKIIGQIRPDRQTLMF 313
Query: 688 SATLPK 705
SAT PK
Sbjct: 314 SATWPK 319
Score = 45.6 bits (103), Expect = 4e-05
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Frame = +2
Query: 254 SMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQ----TLRFVREL 421
S+A+TGSGKT F+LP L + ++ G+ L+L PTRELA Q ++ F L
Sbjct: 171 SIAKTGSGKTLAFMLPALVHITKQAHRQR-GEGPAVLVLLPTRELAQQVQEVSIDFCHSL 229
Query: 422 G-KFTGLTSAAILGGESIEQQFNV-MSGSSPT*LLQHLGASYTSALRCA 562
G K T L A G ++ + + V + ++P LL L T+ +C+
Sbjct: 230 GLKMTCLFGGASKGPQARDLERGVDIVVATPGRLLDFLDNGTTNMKKCS 278
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +3
Query: 189 YKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
+++PT IQ + PIA++G+D++ + G K L
Sbjct: 149 FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTL 181
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/79 (39%), Positives = 44/79 (55%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
++V TPGR + L+ IK++V DEAD + GF EQL +I LP Q +L
Sbjct: 146 HVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLL 205
Query: 688 SATLPKMLVEFARAGLSDP 744
SATLP ++E ++DP
Sbjct: 206 SATLPHEILEMTSKFMTDP 224
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/73 (38%), Positives = 44/73 (60%)
Frame = +2
Query: 254 SMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT 433
+ A++G+GKTA F + +L+ L T + +ALILSPTRELA+Q + V LG +
Sbjct: 68 AQAQSGTGKTATFSISVLQSL------DTQVRETQALILSPTRELAVQIQKVVLALGDYM 121
Query: 434 GLTSAAILGGESI 472
+ A +GG ++
Sbjct: 122 NVQCHACIGGTNL 134
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F MGL +L+GI G+++P+ IQ++ +P L +DV+ + G K
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGK 76
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/79 (39%), Positives = 44/79 (55%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
++V TPGR + L+ IK++V DEAD + GF EQL +I LP Q +L
Sbjct: 146 HVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLL 205
Query: 688 SATLPKMLVEFARAGLSDP 744
SATLP ++E ++DP
Sbjct: 206 SATLPHEILEMTSKFMTDP 224
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/73 (38%), Positives = 44/73 (60%)
Frame = +2
Query: 254 SMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT 433
+ A++G+GKTA F + +L+ L T + +ALILSPTRELA+Q + V LG +
Sbjct: 68 AQAQSGTGKTATFSISVLQSL------DTQVRETQALILSPTRELAVQIQKVVLALGDYM 121
Query: 434 GLTSAAILGGESI 472
+ A +GG ++
Sbjct: 122 NVQCHACIGGTNL 134
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F MGL +L+GI G+++P+ IQ++ IP L +DV+ + G K
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGK 76
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 60.5 bits (140), Expect = 1e-09
Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Frame = +1
Query: 508 NIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
+I+VATPGR L H+ + N+K ++ DEADR+ ++GF ++Q++ LP RQ++L
Sbjct: 192 SILVATPGRLLDHLQNTDNFLVRNMKCLIIDEADRILDIGFEIEMQQVLRHLPKQRQSML 251
Query: 685 FSATLPKMLVEFARAGL-SDP 744
FSAT + E + L S+P
Sbjct: 252 FSATHSPKVDELVKLALHSNP 272
Score = 53.6 bits (123), Expect = 2e-07
Identities = 30/70 (42%), Positives = 44/70 (62%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+TGSGKT F+LP +E L N K G + +I+SPTREL++QT + EL + + L
Sbjct: 112 AKTGSGKTLAFLLPAIELLHKLNWKQHNGTGV--IIVSPTRELSMQTYGVLSELLEGSNL 169
Query: 440 TSAAILGGES 469
T ++GG +
Sbjct: 170 TYGLVMGGSN 179
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/80 (37%), Positives = 44/80 (55%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
+ +VV TPGR + + +VFDEADR+F++GF Q++ I + RQ L+
Sbjct: 390 AEMVVCTPGRIIDLVKMGATNFLRTTFLVFDEADRMFDMGFEAQVKSISDHVRPDRQCLM 449
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSAT + + AR L DP
Sbjct: 450 FSATFKQKVERLARDALVDP 469
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLL-VPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT 433
+A+TGSGKTA ++ P + ++ P+ K G+ A+I+ PTRELA+Q + ++ K
Sbjct: 308 IAKTGSGKTAAYLWPAIVHIMDQPDLKA--GEGPVAVIVVPTRELAIQVFQEAKKFCKVY 365
Query: 434 GLTSAAILGGESIEQQFN 487
+ GG S +Q N
Sbjct: 366 NINPICAYGGGSKWEQSN 383
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +3
Query: 162 VLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+++ I K Y+QPTPIQ IP AL+G+DV+ + G K
Sbjct: 276 LMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGK 315
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 59.3 bits (137), Expect = 3e-09
Identities = 30/82 (36%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEI--CARLPS--SRQ 675
+I++ATPGR + + + + ++ + +V DEADR+ ++GF Q+++I C R+PS R
Sbjct: 303 HILIATPGRLIDVMDQGLIGMEGCRYLVLDEADRMLDMGFEPQIRQIVECNRMPSKEERI 362
Query: 676 TLLFSATLPKMLVEFARAGLSD 741
T +FSAT PK + A+ L +
Sbjct: 363 TAMFSATFPKEIQLLAQDFLKE 384
Score = 49.6 bits (113), Expect = 3e-06
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 11/89 (12%)
Frame = +2
Query: 254 SMARTGSGKTACFVLPILEKLL------VPNNKPTPGKNLR----ALILSPTRELALQTL 403
S A+TGSGKTA F++P++ +L V + + G + AL+LSPTREL+LQ
Sbjct: 208 SCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIF 267
Query: 404 RFVRELGKFTGLTSAAILGG-ESIEQQFN 487
R+ T +TSA + GG E+ + Q +
Sbjct: 268 NESRKFAYRTPITSALLYGGRENYKDQIH 296
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F + L + + I GY +PTP+Q+ +IP G+D++ + G K
Sbjct: 168 FSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGSGK 216
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 58.4 bits (135), Expect = 5e-09
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLF-ELGFGEQLQEICARLPSSRQTLL 684
+IVV TPGR L + LKLD +K V DE D++ + +QEI P +Q ++
Sbjct: 163 HIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMM 222
Query: 685 FSATLPKMLVEFARAGLSD 741
FSATLPK L + + D
Sbjct: 223 FSATLPKELRTVCKRFMQD 241
Score = 37.1 bits (82), Expect = 0.014
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF-TG 436
A++G GKTA FV+ L++L +P G+ + + + TRELA Q + K+ G
Sbjct: 85 AKSGMGKTAVFVITTLQQL-----EPVDGE-VSVVCMCHTRELAFQISKEYERFSKYLPG 138
Query: 437 LTSAAILGGESIEQQFNVMSGSSP 508
+ A GG +I++ ++ P
Sbjct: 139 VKVAVFFGGMAIKKDEERLANDCP 162
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 58.4 bits (135), Expect = 5e-09
Identities = 28/79 (35%), Positives = 44/79 (55%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
++V+ATPGR L + + K+++ K +V DEAD+L F L + LP RQ +L+
Sbjct: 163 HLVIATPGRILDLMEKGVAKMEHCKTLVLDEADKLLSQDFQGILDRLINFLPKERQVMLY 222
Query: 688 SATLPKMLVEFARAGLSDP 744
SAT P + F + + P
Sbjct: 223 SATFPNTVTSFMQKHMHKP 241
Score = 49.2 bits (112), Expect = 3e-06
Identities = 27/81 (33%), Positives = 45/81 (55%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A+ G+GKT + +P++EK+ +P K ++A+++ PTRELALQT + EL K L
Sbjct: 87 AKNGTGKTGAYCIPVIEKI-----QPAL-KAIQAMVIVPTRELALQTSQICVELSKHIQL 140
Query: 440 TSAAILGGESIEQQFNVMSGS 502
GG + ++G+
Sbjct: 141 KVMVTTGGTDLRDDIMRLNGT 161
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/49 (36%), Positives = 32/49 (65%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F+ L +L GI ++G+++P+PIQ +I +ALTG+D++ + G K
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGK 93
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 57.6 bits (133), Expect = 1e-08
Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 5/96 (5%)
Frame = +2
Query: 236 DRERCCSMARTGSGKTACFVLPILEKLLVPNN-----KPTPGKNLRALILSPTRELALQT 400
DR+ A TGSGKT F +P++ +LL ++ + T + RALI++PTREL +Q
Sbjct: 25 DRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQI 84
Query: 401 LRFVRELGKFTGLTSAAILGGESIEQQFNVMSGSSP 508
++ + L T L + +I+GG + +Q ++S P
Sbjct: 85 MKHINALISTTQLIATSIVGGLAQVKQERIISQQRP 120
Score = 37.1 bits (82), Expect = 0.014
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 10/74 (13%)
Frame = +1
Query: 508 NIVVATPGRFLHICIE-----MCLKLDNIKIVVFDEADRLFELGFGEQLQEICARL---- 660
+IVVATPGR + E + ++K +V DE DR+ E G+ +L I ++
Sbjct: 121 DIVVATPGRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEGYFAELTHILNKIHEES 180
Query: 661 -PSSRQTLLFSATL 699
QTL+FSATL
Sbjct: 181 EKEKLQTLVFSATL 194
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 57.6 bits (133), Expect = 1e-08
Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 5/96 (5%)
Frame = +2
Query: 236 DRERCCSMARTGSGKTACFVLPILEKLLVPNN-----KPTPGKNLRALILSPTRELALQT 400
DR+ A TGSGKT F +P++ +LL ++ + T + RALI++PTREL +Q
Sbjct: 192 DRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQI 251
Query: 401 LRFVRELGKFTGLTSAAILGGESIEQQFNVMSGSSP 508
++ + L T L + +I+GG + +Q ++S P
Sbjct: 252 MKHINALISTTQLIATSIVGGLAQVKQERIISQQRP 287
Score = 37.1 bits (82), Expect = 0.014
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 10/74 (13%)
Frame = +1
Query: 508 NIVVATPGRFLHICIE-----MCLKLDNIKIVVFDEADRLFELGFGEQLQEICARL---- 660
+IVVATPGR + E + ++K +V DE DR+ E G+ +L I ++
Sbjct: 288 DIVVATPGRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEGYFAELTHILNKIHEES 347
Query: 661 -PSSRQTLLFSATL 699
QTL+FSATL
Sbjct: 348 EKEKLQTLVFSATL 361
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 56.8 bits (131), Expect = 2e-08
Identities = 30/82 (36%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICAR-LP--SSRQ 675
++I++ATPGR + I + + L + +V DEADR+ ++GF Q+++I + +P ++R
Sbjct: 274 THILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMPPKTART 333
Query: 676 TLLFSATLPKMLVEFARAGLSD 741
T +FSAT PK + A+ L D
Sbjct: 334 TAMFSATFPKEIQVLAKDFLKD 355
Score = 51.2 bits (117), Expect = 8e-07
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 10/88 (11%)
Frame = +2
Query: 254 SMARTGSGKTACFVLPILEKLLV--PNN-KPTPGKNLR------ALILSPTRELALQTLR 406
S A+TGSGKTA F+LPI++ +L P+ KP N R AL+LSPTRELA+Q +
Sbjct: 181 SCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHK 240
Query: 407 FVRELGKFTGLTSAAILGG-ESIEQQFN 487
+ + + +A + GG E+ Q N
Sbjct: 241 EATKFSYKSNIQTAILYGGRENYRDQVN 268
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F G V++ + + GY +PTP+Q+ +IP L +D++ + G K
Sbjct: 141 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGK 189
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 56.8 bits (131), Expect = 2e-08
Identities = 30/82 (36%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICAR-LP--SSRQ 675
++I++ATPGR + I + + L + +V DEADR+ ++GF Q+++I + +P ++R
Sbjct: 258 THILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMPPKTART 317
Query: 676 TLLFSATLPKMLVEFARAGLSD 741
T +FSAT PK + A+ L D
Sbjct: 318 TAMFSATFPKEIQVLAKDFLKD 339
Score = 51.2 bits (117), Expect = 8e-07
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 10/88 (11%)
Frame = +2
Query: 254 SMARTGSGKTACFVLPILEKLLV--PNN-KPTPGKNLR------ALILSPTRELALQTLR 406
S A+TGSGKTA F+LPI++ +L P+ KP N R AL+LSPTRELA+Q +
Sbjct: 165 SCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHK 224
Query: 407 FVRELGKFTGLTSAAILGG-ESIEQQFN 487
+ + + +A + GG E+ Q N
Sbjct: 225 EATKFSYKSNIQTAILYGGRENYRDQVN 252
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F G V++ + + GY +PTP+Q+ +IP L +D++ + G K
Sbjct: 125 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGK 173
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 56.8 bits (131), Expect = 2e-08
Identities = 30/82 (36%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICAR-LP--SSRQ 675
++I++ATPGR + I + + L + +V DEADR+ ++GF Q+++I + +P ++R
Sbjct: 255 THILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMPPKTART 314
Query: 676 TLLFSATLPKMLVEFARAGLSD 741
T +FSAT PK + A+ L D
Sbjct: 315 TAMFSATFPKEIQVLAKDFLKD 336
Score = 51.2 bits (117), Expect = 8e-07
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 10/88 (11%)
Frame = +2
Query: 254 SMARTGSGKTACFVLPILEKLLV--PNN-KPTPGKNLR------ALILSPTRELALQTLR 406
S A+TGSGKTA F+LPI++ +L P+ KP N R AL+LSPTRELA+Q +
Sbjct: 162 SCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHK 221
Query: 407 FVRELGKFTGLTSAAILGG-ESIEQQFN 487
+ + + +A + GG E+ Q N
Sbjct: 222 EATKFSYKSNIQTAILYGGRENYRDQVN 249
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
F G V++ + + GY +PTP+Q+ +IP L +D++ + G K
Sbjct: 122 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGK 170
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 55.6 bits (128), Expect = 4e-08
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Frame = +2
Query: 257 MARTGSGKTACFVLPILEKLL-VPNNKPTPGKNLR--ALILSPTRELALQTLRFVRELGK 427
+A TGSGKTA F+LP+L + +P + ++L A+I++PTRELA Q + GK
Sbjct: 344 VAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGK 403
Query: 428 FTGLTSAAILGGESIEQQ 481
G+ + +++GG S E Q
Sbjct: 404 LLGIKTVSVIGGASREDQ 421
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 669
+V+ATPGR L + L L+ V+ DEADR+ ++GF +Q++ +P +
Sbjct: 431 VVIATPGRLLDVLENRYLLLNQCTYVILDEADRMLDMGFEPDVQKVLEYMPDT 483
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
++ G V + + + GY +PTPIQR+ IPI L +DV+ E G K
Sbjct: 303 WEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGK 351
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 55.6 bits (128), Expect = 4e-08
Identities = 35/79 (44%), Positives = 44/79 (55%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
ARTG+GKT F +PIL+KL V + ALIL+PTRELA Q LGK L
Sbjct: 133 ARTGTGKTLAFAIPILQKLSVDPY------GIYALILTPTRELAFQIAEQFTALGKPITL 186
Query: 440 TSAAILGGESIEQQFNVMS 496
+ I+GG S+ Q +S
Sbjct: 187 KCSVIVGGRSLIHQARELS 205
Score = 45.6 bits (103), Expect = 4e-05
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Frame = +1
Query: 508 NIVVATPGRFLHICIE----MCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQ 675
++VVATPGR + + I+ V DEADR+ E + +QL+ I + RQ
Sbjct: 209 HVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFESISEKRQ 268
Query: 676 TLLFSATLPKMLVEFARAGLSDP 744
TLL SAT+ + R P
Sbjct: 269 TLLLSATITNNINMLHRVSTRKP 291
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 55.6 bits (128), Expect = 4e-08
Identities = 35/79 (44%), Positives = 44/79 (55%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
ARTG+GKT F +PIL+KL V + ALIL+PTRELA Q LGK L
Sbjct: 133 ARTGTGKTLAFAIPILQKLSVDPY------GIYALILTPTRELAFQIAEQFTALGKPITL 186
Query: 440 TSAAILGGESIEQQFNVMS 496
+ I+GG S+ Q +S
Sbjct: 187 KCSVIVGGRSLIHQARELS 205
Score = 45.6 bits (103), Expect = 4e-05
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Frame = +1
Query: 508 NIVVATPGRFLHICIE----MCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQ 675
++VVATPGR + + I+ V DEADR+ E + +QL+ I + RQ
Sbjct: 209 HVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFESISEKRQ 268
Query: 676 TLLFSATLPKMLVEFARAGLSDP 744
TLL SAT+ + R P
Sbjct: 269 TLLLSATITNNINMLHRVSTRKP 291
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 55.2 bits (127), Expect = 5e-08
Identities = 27/87 (31%), Positives = 45/87 (51%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
++VV TPGR + L IK+ V DEAD + GF +Q+ E+ +P Q +L
Sbjct: 149 HVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQDVQVVLL 208
Query: 688 SATLPKMLVEFARAGLSDPTLDKIRVD 768
SAT+P +++ + +P ++ D
Sbjct: 209 SATMPSEVLDVTNRFMRNPIRILVKKD 235
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +2
Query: 254 SMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT 433
+ A++G+GKTA F + IL++ + + P +++AL+++PTRELA Q + + LG++
Sbjct: 71 AQAQSGTGKTATFSVSILQR--IDHEDP----HVQALVMAPTRELAQQIQKVMSALGEYL 124
Query: 434 GLTSAAILGGESI 472
+ +GG S+
Sbjct: 125 NVNILPCIGGTSV 137
Score = 37.1 bits (82), Expect = 0.014
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+F M L +L+GI G+++P+ IQ++ I TGKDV+ + G K
Sbjct: 30 SFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGK 79
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 55.2 bits (127), Expect = 5e-08
Identities = 27/87 (31%), Positives = 45/87 (51%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 687
++VV TPGR + L IK+ V DEAD + GF +Q+ E+ +P Q +L
Sbjct: 149 HVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQDVQVVLL 208
Query: 688 SATLPKMLVEFARAGLSDPTLDKIRVD 768
SAT+P +++ + +P ++ D
Sbjct: 209 SATMPSEVLDVTNRFMRNPIRILVKKD 235
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +2
Query: 254 SMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT 433
+ A++G+GKTA F + IL++ + + P +++AL+++PTRELA Q + + LG++
Sbjct: 71 AQAQSGTGKTATFSVSILQR--IDHEDP----HVQALVMAPTRELAQQIQKVMSALGEYL 124
Query: 434 GLTSAAILGGESI 472
+ +GG S+
Sbjct: 125 NVNILPCIGGTSV 137
Score = 37.1 bits (82), Expect = 0.014
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +3
Query: 132 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEK 281
+F M L +L+GI G+++P+ IQ++ I TGKDV+ + G K
Sbjct: 30 SFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGK 79
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 54.4 bits (125), Expect = 9e-08
Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Frame = +2
Query: 236 DRERCCSMARTGSGKTACFVLPILEKLLVPNNK----PTPGKNLRALILSPTRELALQTL 403
+R + A TGSGKT F LP+++++L + + L A++L PTRELA QT
Sbjct: 162 ERRNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQTY 221
Query: 404 RFVRELGKFTGLTSAAILGGESIEQQFNVMSGSSPT*LLQHLGASYTSALR 556
+ T + SAA GE + Q + S+P ++ HL TS+LR
Sbjct: 222 TEFLKYCANTSI-SAANFSGEETDIQHADILVSTPNRIVFHLDKIDTSSLR 271
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +3
Query: 135 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
F +S +L +++ +QP+PIQ ++IP ++V+ G K L
Sbjct: 128 FSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTL 178
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 53.6 bits (123), Expect = 2e-07
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Frame = +1
Query: 508 NIVVATPGRFLHICIE----MCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQ 675
NI+VATPGR I + K+ ++++V DEADR E+ F + ++EI + +P R+
Sbjct: 133 NILVATPGRLFQIIQHEKTLIARKMRTLQLLVIDEADRFNEIQFEDHMREILSCIPKQRR 192
Query: 676 TLLFSATLPKMLVEFARAGLSDPTLDKIRVDWK--LPSTL 789
T LFSAT K + GL + K+ + PSTL
Sbjct: 193 TGLFSATQVKEEDDLMVFGLRNAKQVKVAQERNSAAPSTL 232
Score = 52.4 bits (120), Expect = 4e-07
Identities = 27/80 (33%), Positives = 45/80 (56%)
Frame = +2
Query: 266 TGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTS 445
TGSGKT FVLP++ ++ N K P ++ ALILSP+REL Q + ++ + LT
Sbjct: 55 TGSGKTLAFVLPMMR--MIQNAKLQPA-DIGALILSPSRELCSQIVSVIQPFAEKLNLTV 111
Query: 446 AAILGGESIEQQFNVMSGSS 505
+ GG+ +++ + +
Sbjct: 112 ETVTGGQKVDKNIKMFKNKN 131
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 53.6 bits (123), Expect = 2e-07
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Frame = +1
Query: 493 VWLF--SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPS 666
VWL S++VV TPG+ L +C + +V DEAD L G+ E++ +I ++LP
Sbjct: 141 VWLEDRSHVVVTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLSFGYEEEMIKIRSKLPP 200
Query: 667 SRQTLLFSATLPKMLVEFARAGLSDPTLDKIRVDWKLPST 786
+ Q L+ SATL + + ++ P + + LP++
Sbjct: 201 TYQCLMTSATLKDDMTTLKKLFMTGPVITIKLTEGDLPNS 240
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 53.6 bits (123), Expect = 2e-07
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Frame = +1
Query: 493 VWLF--SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPS 666
VWL S++VV TPG+ L +C + +V DEAD L G+ E++ +I ++LP
Sbjct: 208 VWLEDRSHVVVTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLSFGYEEEMIKIRSKLPP 267
Query: 667 SRQTLLFSATLPKMLVEFARAGLSDPTLDKIRVDWKLPST 786
+ Q L+ SATL + + ++ P + + LP++
Sbjct: 268 TYQCLMTSATLKDDMTTLKKLFMTGPVITIKLTEGDLPNS 307
Score = 45.6 bits (103), Expect = 4e-05
Identities = 20/66 (30%), Positives = 38/66 (57%)
Frame = +2
Query: 230 SIDRERCCSMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRF 409
+++ + ARTGSGKT F++P+++KL+ + A+I++PT+EL Q +
Sbjct: 123 ALENKNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGPSAVIIAPTKELITQIYKL 182
Query: 410 VRELGK 427
+L +
Sbjct: 183 FVKLSQ 188
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 52.4 bits (120), Expect = 4e-07
Identities = 28/86 (32%), Positives = 41/86 (47%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFS 690
IV+ TPGR + + + ++ V DEAD+L + F + + I LP RQ +FS
Sbjct: 143 IVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMDEVFRDDINIIINSLPQIRQVAVFS 202
Query: 691 ATLPKMLVEFARAGLSDPTLDKIRVD 768
AT P+ L L D L + D
Sbjct: 203 ATYPRNLDNLLSTFLRDAALVRFNAD 228
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/77 (24%), Positives = 41/77 (53%)
Frame = +3
Query: 123 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQLVXXXX 302
S+ F+S+ + L+ + + +P+P+Q + IP+ L G+D++ + G K LV
Sbjct: 20 SNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVL 79
Query: 303 XXRNFLFRTTNLHLERI 353
N R++ H++++
Sbjct: 80 AVENLDSRSS--HIQKV 94
Score = 35.1 bits (77), Expect = 0.058
Identities = 20/70 (28%), Positives = 40/70 (57%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A++G+GKT F +L N + +++ +I++PTRE+++Q VR++ TG
Sbjct: 66 AKSGTGKTLVF------SVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGA 118
Query: 440 TSAAILGGES 469
++ +GG +
Sbjct: 119 RTSVYVGGSA 128
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 52.4 bits (120), Expect = 4e-07
Identities = 28/86 (32%), Positives = 41/86 (47%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFS 690
IV+ TPGR + + + ++ V DEAD+L + F + + I LP RQ +FS
Sbjct: 143 IVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMDEVFRDDINIIINSLPQIRQVAVFS 202
Query: 691 ATLPKMLVEFARAGLSDPTLDKIRVD 768
AT P+ L L D L + D
Sbjct: 203 ATYPRNLDNLLSTFLRDAALVRFNAD 228
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/77 (24%), Positives = 41/77 (53%)
Frame = +3
Query: 123 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQLVXXXX 302
S+ F+S+ + L+ + + +P+P+Q + IP+ L G+D++ + G K LV
Sbjct: 20 SNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVL 79
Query: 303 XXRNFLFRTTNLHLERI 353
N R++ H++++
Sbjct: 80 AVENLDSRSS--HIQKV 94
Score = 35.1 bits (77), Expect = 0.058
Identities = 20/70 (28%), Positives = 40/70 (57%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A++G+GKT F +L N + +++ +I++PTRE+++Q VR++ TG
Sbjct: 66 AKSGTGKTLVF------SVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGA 118
Query: 440 TSAAILGGES 469
++ +GG +
Sbjct: 119 RTSVYVGGSA 128
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 50.8 bits (116), Expect = 1e-06
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLF-ELGFGEQLQEICARLPSSRQTLL 684
+IVV TPGR L + LKLD +K V DE D++ + +QEI +Q ++
Sbjct: 162 HIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEI-------KQVMM 214
Query: 685 FSATLPKMLVEFARAGLSDP 744
FSATLPK L + + DP
Sbjct: 215 FSATLPKELRTVCKRFMQDP 234
Score = 37.1 bits (82), Expect = 0.014
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF-TG 436
A++G GKTA FV+ L++L +P G+ + + + TRELA Q + K+ G
Sbjct: 84 AKSGMGKTAVFVITTLQQL-----EPVDGE-VSVVCMCHTRELAFQISKEYERFSKYLPG 137
Query: 437 LTSAAILGGESIEQQFNVMSGSSP 508
+ A GG +I++ ++ P
Sbjct: 138 VKVAVFFGGMAIKKDEERLANDCP 161
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 50.0 bits (114), Expect = 2e-06
Identities = 33/78 (42%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLL--------VPNNKPTPGKNLRALILSPTRELALQTLRFVR 415
A TGSGKT F++P + KL+ V + KP+P R LI++PTREL QT R
Sbjct: 780 AHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSP----RLLIVAPTRELVNQTFTTAR 835
Query: 416 ELGKFTGLTSAAILGGES 469
+L TGL GG S
Sbjct: 836 QLTYETGLKCGLAFGGYS 853
Score = 41.5 bits (93), Expect = 7e-04
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELG-FGEQLQEICARLPSSR--QT 678
NI+VAT GR + L +K +V DEADR+ + FGE++ +I P R QT
Sbjct: 868 NILVATMGRLQDFVNAGEVSLSKMKYIVLDEADRMVDSNDFGEEVSKIIGS-PGERTQQT 926
Query: 679 LLFSATLPKML 711
+LFSA+ + L
Sbjct: 927 VLFSASFSEDL 937
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 50.0 bits (114), Expect = 2e-06
Identities = 33/78 (42%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLL--------VPNNKPTPGKNLRALILSPTRELALQTLRFVR 415
A TGSGKT F++P + KL+ V + KP+P R LI++PTREL QT R
Sbjct: 780 AHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSP----RLLIVAPTRELVNQTFTTAR 835
Query: 416 ELGKFTGLTSAAILGGES 469
+L TGL GG S
Sbjct: 836 QLTYETGLKCGLAFGGYS 853
Score = 41.5 bits (93), Expect = 7e-04
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELG-FGEQLQEICARLPSSR--QT 678
NI+VAT GR + L +K +V DEADR+ + FGE++ +I P R QT
Sbjct: 868 NILVATMGRLQDFVNAGEVSLSKMKYIVLDEADRMVDSNDFGEEVSKIIGS-PGERTQQT 926
Query: 679 LLFSATLPKML 711
+LFSA+ + L
Sbjct: 927 VLFSASFSEDL 937
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/88 (29%), Positives = 45/88 (51%)
Frame = +1
Query: 505 SNIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 684
S++++ TP FL + IK+ V DEAD + GF +Q+ E+ +P Q +L
Sbjct: 110 SHVLMGTPKDFLS---NIPSDTSRIKMFVLDEADEMLSKGFKDQIYEVFRSMPQDVQVVL 166
Query: 685 FSATLPKMLVEFARAGLSDPTLDKIRVD 768
SAT+P +++ + DP ++ D
Sbjct: 167 LSATMPSEVLDVTNRFMRDPIRILVKKD 194
Score = 33.1 bits (72), Expect = 0.24
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +3
Query: 144 MGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQLV 290
M L +L+GI G+++P+ IQ+ + TGKDV + G K ++
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVI 49
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/65 (36%), Positives = 37/65 (56%)
Frame = +1
Query: 511 IVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFS 690
IV+ATPGR + + + L ++ VV DEADR+ ++GF ++ I + R L S
Sbjct: 215 IVIATPGRLTDLSNDGVISLASVTYVVLDEADRMLDMGFEVAIRRILFEIRPDRLVALTS 274
Query: 691 ATLPK 705
AT P+
Sbjct: 275 ATWPE 279
Score = 43.6 bits (98), Expect = 2e-04
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Frame = +2
Query: 248 CCSMARTGSGKTACFVLPIL-----EKLLVPNNKPTPGKNLRALILSPTRELALQTLRFV 412
C +++TGSGKT F+LP L + N + L+LSPTRELA Q V
Sbjct: 124 CIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEV 183
Query: 413 RELGKFTGLTSAAILGGESIEQQFNVMSG 499
++ + G S + GG S +Q G
Sbjct: 184 KKY-SYNGYKSVCLYGGGSRPEQVEACRG 211
Score = 37.1 bits (82), Expect = 0.014
Identities = 16/50 (32%), Positives = 30/50 (60%)
Frame = +3
Query: 138 QSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVQWPELGPEKQL 287
Q+ G + ++ I K G+++P+PIQ + P+ L+G+D + + G K L
Sbjct: 87 QAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTL 136
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Frame = +2
Query: 233 IDRERCCSMARTGSGKTACFVLPILEKLL----VPNNKPTPGKNLRALILSPTRELALQ 397
+D A T +GKTA F LPI++K+L NK ALIL+PTRELA Q
Sbjct: 416 LDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQ 474
Score = 33.1 bits (72), Expect = 0.24
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFE 618
+I++ T GR + ++ + L +++ +VFDEADRL +
Sbjct: 511 DILIGTCGRIMDFTVKSHISLLHLRFLVFDEADRLLQ 547
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 41.1 bits (92), Expect = 9e-04
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +2
Query: 260 ARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL 439
A TGSGKT C+VLP+L + +KP+ K L+A+IL P + L Q + + +G+
Sbjct: 163 APTGSGKTICYVLPVLAAV---GSKPS--KILQAVILVPVQTLVAQIVDEFKRWNDESGV 217
Query: 440 TSAAIL-GGESIEQQFNVMSGSSP 508
L G E++ ++ P
Sbjct: 218 AKVVSLSGANDFEKEARQLASDPP 241
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Frame = +1
Query: 508 NIVVATPGRFL-HIC--IEMCLKLDNIKIVVFDEADRLFEL 621
N++VATP R + H+ I + L ++ ++ DEADR+ +L
Sbjct: 242 NVIVATPARLVQHLTSKIPPPIDLSKLRFLIVDEADRMGKL 282
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 36.7 bits (81), Expect = 0.019
Identities = 24/59 (40%), Positives = 36/59 (61%)
Frame = +2
Query: 254 SMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF 430
+ A++G+GKTA FVL +L ++ V N P + + L+PT ELA Q V ++GKF
Sbjct: 253 AQAQSGTGKTAAFVLTMLCRIDV--NLMCP----QCICLAPTLELAKQIGEVVEKMGKF 305
Score = 33.1 bits (72), Expect = 0.24
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Frame = +1
Query: 499 LFSNIVVATPGRFL-HICIEMCLKLDNIKIVVFDEAD-RLFELGFGE---QLQEICARLP 663
L IV+ TPG ++ C+ I+ +V DEAD ++ GF + + +
Sbjct: 328 LTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDAS 387
Query: 664 SSRQTLLFSATLPKMLVEFA 723
S Q++LFSAT + ++ FA
Sbjct: 388 DSVQSMLFSATYDEPVINFA 407
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 36.7 bits (81), Expect = 0.019
Identities = 24/59 (40%), Positives = 36/59 (61%)
Frame = +2
Query: 254 SMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF 430
+ A++G+GKTA FVL +L ++ V N P + + L+PT ELA Q V ++GKF
Sbjct: 278 AQAQSGTGKTAAFVLTMLCRIDV--NLMCP----QCICLAPTLELAKQIGEVVEKMGKF 330
Score = 33.1 bits (72), Expect = 0.24
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Frame = +1
Query: 499 LFSNIVVATPGRFL-HICIEMCLKLDNIKIVVFDEAD-RLFELGFGE---QLQEICARLP 663
L IV+ TPG ++ C+ I+ +V DEAD ++ GF + + +
Sbjct: 353 LTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDAS 412
Query: 664 SSRQTLLFSATLPKMLVEFA 723
S Q++LFSAT + ++ FA
Sbjct: 413 DSVQSMLFSATYDEPVINFA 432
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 36.7 bits (81), Expect = 0.019
Identities = 24/59 (40%), Positives = 36/59 (61%)
Frame = +2
Query: 254 SMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF 430
+ A++G+GKTA FVL +L ++ V N P + + L+PT ELA Q V ++GKF
Sbjct: 662 AQAQSGTGKTAAFVLTMLCRIDV--NLMCP----QCICLAPTLELAKQIGEVVEKMGKF 714
Score = 33.1 bits (72), Expect = 0.24
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Frame = +1
Query: 499 LFSNIVVATPGRFL-HICIEMCLKLDNIKIVVFDEAD-RLFELGFGE---QLQEICARLP 663
L IV+ TPG ++ C+ I+ +V DEAD ++ GF + + +
Sbjct: 737 LTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDAS 796
Query: 664 SSRQTLLFSATLPKMLVEFA 723
S Q++LFSAT + ++ FA
Sbjct: 797 DSVQSMLFSATYDEPVINFA 816
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 32.7 bits (71), Expect = 0.31
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Frame = +1
Query: 547 CIEMCLKLDNIKIVVFDEADRLFE-LGFGEQLQEICARLPSSR----QTLLFSATLPK 705
C ++CL DN+K ++ DEAD++ + FG + I +L Q+ FSAT K
Sbjct: 240 CGDVCL--DNLKTIILDEADKMIDNCAFGPDINWILDQLKEENLENLQSCFFSATYNK 295
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/68 (25%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELG-FGEQLQEICARLPS----SR 672
+I T G+ + + LDN+K+++ DE+D++ ++ FG + + +L +
Sbjct: 224 DIAFCTMGKLKASIEDKTILLDNLKMMILDESDKMIDIACFGNDIDWVLDQLQEDVLRNL 283
Query: 673 QTLLFSAT 696
Q+ FSA+
Sbjct: 284 QSCFFSAS 291
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 29.5 bits (63), Expect = 2.9
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 9/88 (10%)
Frame = +1
Query: 508 NIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLF--ELGFGEQLQEICARLP------ 663
+IVV TP R + L N++ VV DE D+ + Q++ I LP
Sbjct: 336 DIVVGTPSRVFDLIHTGKLATKNLQFVVIDEIDQFLAGKNNCAHQIESIFRVLPLVAQDG 395
Query: 664 SSRQTLLFSATLPKMLV-EFARAGLSDP 744
+ RQ + SATL V FA +S P
Sbjct: 396 TRRQVIACSATLHNFEVCRFADRHMSFP 423
>Z68341-4|CAA92767.2| 1266|Caenorhabditis elegans Hypothetical
protein F01G4.3 protein.
Length = 1266
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +1
Query: 574 NIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFSATLPKMLVEFA 723
+++ VVFDE + G +E+ LP+ + ++ SAT+P VEFA
Sbjct: 398 DLEWVVFDEVHYINNEERGHVWEEVLIMLPAHVKIVMLSATVPN-CVEFA 446
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +1
Query: 547 CIEMCLKLDNIKIVVFDEADRLFE-LGFGEQLQEICARLPSSR----QTLLFSATLPK 705
C ++CL DN+K ++ DEAD++ + F + I +L Q+ FSAT K
Sbjct: 140 CGDVCL--DNLKTIILDEADKMIDNCAFVPDINWILDQLKEENLENLQSCFFSATYNK 195
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,230,562
Number of Sequences: 27780
Number of extensions: 317056
Number of successful extensions: 918
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -