Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021044
(754 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 103 1e-22
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 84 1e-16
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 80 1e-15
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 69 3e-12
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 67 1e-11
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 58 7e-09
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 58 7e-09
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 58 7e-09
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 51 8e-07
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 50 2e-06
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 50 2e-06
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 48 5e-06
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 48 5e-06
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 47 1e-05
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 47 1e-05
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 47 1e-05
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 47 1e-05
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 47 1e-05
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 47 2e-05
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 47 2e-05
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 47 2e-05
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 47 2e-05
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 47 2e-05
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 44 2e-04
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 43 2e-04
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 43 2e-04
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 43 3e-04
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 42 4e-04
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 42 4e-04
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 41 0.001
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 40 0.001
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 40 0.001
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 38 0.008
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 38 0.008
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 34 0.094
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 33 0.16
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 33 0.16
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 33 0.29
AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical... 33 0.29
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 31 0.66
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 31 0.88
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 30 1.5
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 30 1.5
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 3.5
U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis ... 29 3.5
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 3.5
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 3.5
AF016427-5|AAB65357.2| 273|Caenorhabditis elegans Ground-like (... 29 4.7
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 28 6.2
AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine re... 28 6.2
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 28 8.2
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 28 8.2
U00031-8|AAK18869.1| 201|Caenorhabditis elegans Hypothetical pr... 28 8.2
AF067945-16|AAC17675.1| 341|Caenorhabditis elegans Serpentine r... 28 8.2
AF016654-8|AAB66025.2| 331|Caenorhabditis elegans Hypothetical ... 28 8.2
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 103 bits (248), Expect = 1e-22
Identities = 48/77 (62%), Positives = 61/77 (79%)
Frame = +1
Query: 523 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 702
+TGSGKTLA++LPA+VHI Q +RG+GP LVL PTRELAQQ+Q+V+ DF H+ ++
Sbjct: 174 KTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKM 233
Query: 703 TCVFGGAPKREQARDLE 753
TC+FGGA K QARDLE
Sbjct: 234 TCLFGGASKGPQARDLE 250
Score = 58.8 bits (136), Expect = 4e-09
Identities = 28/84 (33%), Positives = 50/84 (59%)
Frame = +3
Query: 258 SLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNSIQYFEEANFPDYVQQGV 437
+L P K+FY + V +R YE++++ + ++VT+ G V + F EA P + + +
Sbjct: 86 NLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQIHE-L 144
Query: 438 KTMGYKEPTPIQAQGWPIAMSGKN 509
+++PT IQ+ WPIAMSG++
Sbjct: 145 LYGKFQKPTVIQSISWPIAMSGRD 168
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 83.8 bits (198), Expect = 1e-16
Identities = 37/77 (48%), Positives = 53/77 (68%)
Frame = +1
Query: 523 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 702
+TGSGKT AY+ PAIVHI +QP ++ G+GP+A+++ PTRELA Q+ Q A F +
Sbjct: 310 KTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINP 369
Query: 703 TCVFGGAPKREQARDLE 753
C +GG K EQ+ +L+
Sbjct: 370 ICAYGGGSKWEQSNELQ 386
Score = 56.8 bits (131), Expect = 2e-08
Identities = 25/85 (29%), Positives = 45/85 (52%)
Frame = +3
Query: 255 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNSIQYFEEANFPDYVQQG 434
+ Q FNKNFY+ H + + +V +N + V G++ + F +F + +
Sbjct: 220 IQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEA 279
Query: 435 VKTMGYKEPTPIQAQGWPIAMSGKN 509
++ Y++PTPIQA P A+SG++
Sbjct: 280 IRKSEYEQPTPIQAMAIPSALSGRD 304
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 80.2 bits (189), Expect = 1e-15
Identities = 38/77 (49%), Positives = 50/77 (64%)
Frame = +1
Query: 523 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 702
+TGSGKTLA++LP HI +QP + GDGPIA++LAPTRELA Q + A F ++
Sbjct: 349 KTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKV 408
Query: 703 TCVFGGAPKREQARDLE 753
C +GG EQ DL+
Sbjct: 409 ACTYGGVGISEQIADLK 425
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNSIQYFEEANFPDYVQQ 431
V + F KNFY + + + EV+ YR + +TV G++ I+ + + +
Sbjct: 258 VYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMN 317
Query: 432 GVKTMGYKEPTPIQAQGWPIAMSGKN 509
+K Y +PT IQAQ P MSG++
Sbjct: 318 VLKKFEYSKPTSIQAQAIPSIMSGRD 343
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 69.3 bits (162), Expect = 3e-12
Identities = 34/80 (42%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Frame = +1
Query: 523 QTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADFGHTS 690
+TGSGKT A++LP +V I + P + R + GP A+++APTRELAQQI++ FG
Sbjct: 346 ETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLL 405
Query: 691 YVRNTCVFGGAPKREQARDL 750
++ V GGA + +Q L
Sbjct: 406 GIKTVSVIGGASREDQGMKL 425
Score = 56.4 bits (130), Expect = 2e-08
Identities = 24/58 (41%), Positives = 36/58 (62%)
Frame = +3
Query: 336 YRNNHEVTVSGVEVHNSIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 509
+R + +++ G V ++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRD 340
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 67.3 bits (157), Expect = 1e-11
Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 6/79 (7%)
Frame = +1
Query: 520 TQTGSGKTLAYILPAIVHINNQ-PPIRRGD-----GPIALVLAPTRELAQQIQQVAADFG 681
+QTGSGKTLA++LPA++HI+ Q + D P LVL+PTRELAQQI+ +
Sbjct: 128 SQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYS 187
Query: 682 HTSYVRNTCVFGGAPKREQ 738
+ Y ++ C++GG + EQ
Sbjct: 188 YNGY-KSVCLYGGGSRPEQ 205
Score = 36.7 bits (81), Expect = 0.018
Identities = 26/99 (26%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Frame = +3
Query: 252 FVSLQPFNKNFYDPHPTVLKRSPYEVEE-YRNNHEVTV------SGVEVHNSIQYFEEAN 410
F ++P ++ Y SP +++E Y N + V S V++ + FE+A
Sbjct: 30 FSWMKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAF 89
Query: 411 FPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKN*LAYS 524
+ G ++ G+++P+PIQ+Q WP+ +SG++ + S
Sbjct: 90 GSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVS 128
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 58.0 bits (134), Expect = 7e-09
Identities = 39/85 (45%), Positives = 49/85 (57%), Gaps = 10/85 (11%)
Frame = +1
Query: 523 QTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQQIQQVAA 672
QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A
Sbjct: 184 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEAT 243
Query: 673 DFGHTSYVRNTCVFGGAPKREQARD 747
F + S ++ ++GG RE RD
Sbjct: 244 KFSYKSNIQTAILYGG---RENYRD 265
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +3
Query: 345 NHEVTVSGVEVHNSIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 509
N V VSG V +I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 124 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 178
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 58.0 bits (134), Expect = 7e-09
Identities = 39/85 (45%), Positives = 49/85 (57%), Gaps = 10/85 (11%)
Frame = +1
Query: 523 QTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQQIQQVAA 672
QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A
Sbjct: 168 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEAT 227
Query: 673 DFGHTSYVRNTCVFGGAPKREQARD 747
F + S ++ ++GG RE RD
Sbjct: 228 KFSYKSNIQTAILYGG---RENYRD 249
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +3
Query: 345 NHEVTVSGVEVHNSIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 509
N V VSG V +I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 108 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 162
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 58.0 bits (134), Expect = 7e-09
Identities = 39/85 (45%), Positives = 49/85 (57%), Gaps = 10/85 (11%)
Frame = +1
Query: 523 QTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQQIQQVAA 672
QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A
Sbjct: 165 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEAT 224
Query: 673 DFGHTSYVRNTCVFGGAPKREQARD 747
F + S ++ ++GG RE RD
Sbjct: 225 KFSYKSNIQTAILYGG---RENYRD 246
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +3
Query: 345 NHEVTVSGVEVHNSIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 509
N V VSG V +I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 105 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 159
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 51.2 bits (117), Expect = 8e-07
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Frame = +1
Query: 526 TGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVAAD----FGH 684
TGSGKT+ ++LP ++ Q P R +GP L++ P+RELA+QI + + G
Sbjct: 236 TGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLIIEMFDALGK 295
Query: 685 TSY--VRNTCVFGGAPKREQARDL 750
+R GG P EQA+D+
Sbjct: 296 AGLPEMRAGLCIGGVPIGEQAKDV 319
Score = 35.5 bits (78), Expect = 0.041
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +3
Query: 291 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNSIQYFEEANFPDYVQQGV-KTMGYKEPTP 467
P + ++S + E R ++ G + I F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 468 IQAQGWPIAMSGKN 509
IQ QG P+A+SG++
Sbjct: 216 IQIQGIPVALSGRD 229
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/79 (37%), Positives = 44/79 (55%)
Frame = +1
Query: 517 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 696
+ Q+G+GKT + + + I+++ P + ALV+APTRELAQQIQ+V + G V
Sbjct: 72 QAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALGEYLNV 126
Query: 697 RNTCVFGGAPKREQARDLE 753
GG R+ R LE
Sbjct: 127 NILPCIGGTSVRDDQRKLE 145
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/79 (37%), Positives = 44/79 (55%)
Frame = +1
Query: 517 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 696
+ Q+G+GKT + + + I+++ P + ALV+APTRELAQQIQ+V + G V
Sbjct: 72 QAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALGEYLNV 126
Query: 697 RNTCVFGGAPKREQARDLE 753
GG R+ R LE
Sbjct: 127 NILPCIGGTSVRDDQRKLE 145
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 48.4 bits (110), Expect = 5e-06
Identities = 27/73 (36%), Positives = 42/73 (57%)
Frame = +1
Query: 520 TQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 699
++TGSGKT A+++P + + R G AL+++PTRELA Q +V + G + +R
Sbjct: 68 SRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLR 123
Query: 700 NTCVFGGAPKREQ 738
C+ GG EQ
Sbjct: 124 CACLVGGDQIEEQ 136
Score = 31.5 bits (68), Expect = 0.66
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 378 HNSIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LAYS 524
H +++ V + ++ G+ +PTPIQ + P M GK+ +A S
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMS 68
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 48.4 bits (110), Expect = 5e-06
Identities = 27/73 (36%), Positives = 42/73 (57%)
Frame = +1
Query: 520 TQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 699
++TGSGKT A+++P + + R G AL+++PTRELA Q +V + G + +R
Sbjct: 68 SRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLR 123
Query: 700 NTCVFGGAPKREQ 738
C+ GG EQ
Sbjct: 124 CACLVGGDQIEEQ 136
Score = 31.5 bits (68), Expect = 0.66
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 378 HNSIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LAYS 524
H +++ V + ++ G+ +PTPIQ + P M GK+ +A S
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMS 68
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +1
Query: 523 QTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTS 690
QTGSGKT A++LP + + + + G+G P ++L PTRELA QI F + +
Sbjct: 386 QTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQT 445
Query: 691 YVRNTCVFGG 720
+ V+GG
Sbjct: 446 MMEIKPVYGG 455
Score = 32.3 bits (70), Expect = 0.38
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
F EAN + +Q+ V GY + TPIQ P+ G + +A
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +1
Query: 523 QTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTS 690
QTGSGKT A++LP + + + + G+G P ++L PTRELA QI F + +
Sbjct: 386 QTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQT 445
Query: 691 YVRNTCVFGG 720
+ V+GG
Sbjct: 446 MMEIKPVYGG 455
Score = 32.3 bits (70), Expect = 0.38
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
F EAN + +Q+ V GY + TPIQ P+ G + +A
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +1
Query: 523 QTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVAADFGHTS 690
QTGSGKT A++LP + + + + G +G P ++L PTRELA QI F + S
Sbjct: 343 QTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQS 402
Query: 691 YVRNTCVFGG 720
+ V+GG
Sbjct: 403 VMEIKPVYGG 412
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
F +++ P +++ V+ GY TPIQ P+ GK+ LA
Sbjct: 300 FSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILA 340
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +1
Query: 523 QTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVAADFGHTS 690
QTGSGKT A++LP + + + + G +G P ++L PTRELA QI F + S
Sbjct: 343 QTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQS 402
Query: 691 YVRNTCVFGG 720
+ V+GG
Sbjct: 403 VMEIKPVYGG 412
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
F +++ P +++ V+ GY TPIQ P+ GK+ LA
Sbjct: 300 FSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILA 340
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +1
Query: 523 QTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTS 690
QTGSGKT A++LP + + + + G+G P ++L PTRELA QI F + +
Sbjct: 386 QTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQT 445
Query: 691 YVRNTCVFGG 720
+ V+GG
Sbjct: 446 MMEIKPVYGG 455
Score = 32.3 bits (70), Expect = 0.38
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
F EAN + +Q+ V GY + TPIQ P+ G + +A
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +1
Query: 523 QTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTS 690
QTGSGKT A++LP + + ++ + G+G P ++L PTREL QI F + +
Sbjct: 597 QTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQT 656
Query: 691 YVRNTCVFGG 720
+ V+GG
Sbjct: 657 MMEIRPVYGG 666
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
F EAN + +++ V GY + TPIQ P+ G + +A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +1
Query: 523 QTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTS 690
QTGSGKT A++LP + + ++ + G+G P ++L PTREL QI F + +
Sbjct: 597 QTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQT 656
Query: 691 YVRNTCVFGG 720
+ V+GG
Sbjct: 657 MMEIRPVYGG 666
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
F EAN + +++ V GY + TPIQ P+ G + +A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 46.8 bits (106), Expect = 2e-05
Identities = 28/76 (36%), Positives = 42/76 (55%)
Frame = +1
Query: 523 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 702
+TG+GKTLA+ +P + ++ P G AL+L PTRELA QI + G ++
Sbjct: 134 RTGTGKTLAFAIPILQKLSVDPY-----GIYALILTPTRELAFQIAEQFTALGKPITLKC 188
Query: 703 TCVFGGAPKREQARDL 750
+ + GG QAR+L
Sbjct: 189 SVIVGGRSLIHQAREL 204
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 46.8 bits (106), Expect = 2e-05
Identities = 28/76 (36%), Positives = 42/76 (55%)
Frame = +1
Query: 523 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 702
+TG+GKTLA+ +P + ++ P G AL+L PTRELA QI + G ++
Sbjct: 134 RTGTGKTLAFAIPILQKLSVDPY-----GIYALILTPTRELAFQIAEQFTALGKPITLKC 188
Query: 703 TCVFGGAPKREQARDL 750
+ + GG QAR+L
Sbjct: 189 SVIVGGRSLIHQAREL 204
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +1
Query: 523 QTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTS 690
QTGSGKT A++LP + + ++ + G+G P ++L PTREL QI F + +
Sbjct: 597 QTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQT 656
Query: 691 YVRNTCVFGG 720
+ V+GG
Sbjct: 657 MMEIRPVYGG 666
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
F EAN + +++ V GY + TPIQ P+ G + +A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Frame = +1
Query: 517 RTQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQ 663
+ +T +GKT A+ LP I I + R+ DGP+AL+LAPTRELA QI +
Sbjct: 424 QAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHE 477
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/67 (35%), Positives = 42/67 (62%)
Frame = +1
Query: 523 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 702
+TGSGKTLA++LPAI + ++ ++ +G ++++PTREL+ Q V ++ S +
Sbjct: 113 KTGSGKTLAFLLPAI-ELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSELLEGSNLTY 171
Query: 703 TCVFGGA 723
V GG+
Sbjct: 172 GLVMGGS 178
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +1
Query: 502 ERISWRTQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQV 666
+ I R +TGSGKT A+++P + + + G GP A+++APT+EL QI ++
Sbjct: 127 KNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGPSAVIIAPTKELITQIYKL 182
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 11/86 (12%)
Frame = +1
Query: 523 QTGSGKTLAYILPAIVHINNQPPI-----------RRGDGPIALVLAPTRELAQQIQQVA 669
QTGSGKT A+++P + I P R+ P ALVL+PTREL+ QI +
Sbjct: 211 QTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNES 270
Query: 670 ADFGHTSYVRNTCVFGGAPKREQARD 747
F + + + + ++GG RE +D
Sbjct: 271 RKFAYRTPITSALLYGG---RENYKD 293
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +3
Query: 354 VTVSGVEVHNSIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 509
V +G +V I F + + +++++ +KT GY PTP+Q P G++
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRD 205
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 42.7 bits (96), Expect = 3e-04
Identities = 29/76 (38%), Positives = 38/76 (50%)
Frame = +1
Query: 493 LCLERISWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAA 672
L L + + TGSGKTLA++LP + I N G AL+L+P+REL QI V
Sbjct: 44 LNLSDVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIG--ALILSPSRELCSQIVSVIQ 101
Query: 673 DFGHTSYVRNTCVFGG 720
F + V GG
Sbjct: 102 PFAEKLNLTVETVTGG 117
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 42.7 bits (96), Expect = 3e-04
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Frame = +1
Query: 523 QTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 684
+TGSGKTLA+ +P + + + + GP AL++APTREL QI +
Sbjct: 34 ETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMKHINALIS 93
Query: 685 TSYVRNTCVFGGAPKREQAR 744
T+ + T + GG + +Q R
Sbjct: 94 TTQLIATSIVGGLAQVKQER 113
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 42.7 bits (96), Expect = 3e-04
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Frame = +1
Query: 523 QTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 684
+TGSGKTLA+ +P + + + + GP AL++APTREL QI +
Sbjct: 201 ETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMKHINALIS 260
Query: 685 TSYVRNTCVFGGAPKREQAR 744
T+ + T + GG + +Q R
Sbjct: 261 TTQLIATSIVGGLAQVKQER 280
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 42.3 bits (95), Expect = 4e-04
Identities = 27/79 (34%), Positives = 41/79 (51%)
Frame = +1
Query: 517 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 696
+ Q+G+GKT + + + ++ Q +R AL+L+PTRELA QIQ+V G V
Sbjct: 69 QAQSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNV 123
Query: 697 RNTCVFGGAPKREQARDLE 753
+ GG E R L+
Sbjct: 124 QCHACIGGTNLGEDIRKLD 142
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 42.3 bits (95), Expect = 4e-04
Identities = 27/79 (34%), Positives = 41/79 (51%)
Frame = +1
Query: 517 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 696
+ Q+G+GKT + + + ++ Q +R AL+L+PTRELA QIQ+V G V
Sbjct: 69 QAQSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNV 123
Query: 697 RNTCVFGGAPKREQARDLE 753
+ GG E R L+
Sbjct: 124 QCHACIGGTNLGEDIRKLD 142
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/73 (34%), Positives = 37/73 (50%)
Frame = +1
Query: 517 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 696
R + G+GKT AY +P I I QP ++ A+V+ PTRELA Q Q+ + +
Sbjct: 86 RAKNGTGKTGAYCIPVIEKI--QPALKAIQ---AMVIVPTRELALQTSQICVELSKHIQL 140
Query: 697 RNTCVFGGAPKRE 735
+ GG R+
Sbjct: 141 KVMVTTGGTDLRD 153
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Frame = +1
Query: 526 TGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 690
TGSGKTLA+++P ++ + ++ P L++APTREL Q A + +
Sbjct: 782 TGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYET 841
Query: 691 YVRNTCVFGGAPKREQARDL 750
++ FGG + + L
Sbjct: 842 GLKCGLAFGGYSRNANVQHL 861
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Frame = +1
Query: 526 TGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 690
TGSGKTLA+++P ++ + ++ P L++APTREL Q A + +
Sbjct: 782 TGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYET 841
Query: 691 YVRNTCVFGGAPKREQARDL 750
++ FGG + + L
Sbjct: 842 GLKCGLAFGGYSRNANVQHL 861
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 37.9 bits (84), Expect = 0.008
Identities = 27/76 (35%), Positives = 35/76 (46%)
Frame = +1
Query: 523 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 702
+TGSGKT A+ +P + + + P LVL PTRELA QI Q G +
Sbjct: 89 ETGSGKTGAFAIPVLQSLLDHP-----QAFFCLVLTPTRELAFQIGQQFEALGSGIGLIA 143
Query: 703 TCVFGGAPKREQARDL 750
+ GG QA L
Sbjct: 144 AVIVGGVDMAAQAMAL 159
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 37.9 bits (84), Expect = 0.008
Identities = 21/47 (44%), Positives = 29/47 (61%)
Frame = +1
Query: 526 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 666
TG+GKT A++LP + + +P + LVL PTRELA Q+ QV
Sbjct: 194 TGTGKTAAFVLPILERMIYRP--KGASCTRVLVLVPTRELAIQVFQV 238
Score = 35.9 bits (79), Expect = 0.031
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +3
Query: 330 EEYRNNHEVTVSGVEVHNSIQY-FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 506
+E + + G + S+ FE+ N + + GY +PTPIQ P+A++GK
Sbjct: 127 QENEDFFSALIDGKSLDTSVNVSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGK 186
Query: 507 N 509
+
Sbjct: 187 D 187
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 34.3 bits (75), Expect = 0.094
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = +1
Query: 526 TGSGKTLAYILPA---IVHINNQPPIRRGDGP--IALVLAPTRELAQQ 654
TGSGKTLA+ LP I+ + + + +A+VL PTRELA Q
Sbjct: 172 TGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 33.5 bits (73), Expect = 0.16
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +1
Query: 517 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 681
+ Q+G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 254 QAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 303
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 33.5 bits (73), Expect = 0.16
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +1
Query: 517 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 681
+ Q+G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 279 QAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 328
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 33.5 bits (73), Expect = 0.16
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +1
Query: 517 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 681
+ Q+G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 663 QAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 712
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 33.5 bits (73), Expect = 0.16
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +1
Query: 526 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 705
TGSGKT+ Y+LP + + ++P A++L P + L QI + S V
Sbjct: 165 TGSGKTICYVLPVLAAVGSKP----SKILQAVILVPVQTLVAQIVDEFKRWNDESGVAKV 220
Query: 706 CVFGGAPKRE-QARDL 750
GA E +AR L
Sbjct: 221 VSLSGANDFEKEARQL 236
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 32.7 bits (71), Expect = 0.29
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +1
Query: 523 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 654
+TGSGKTLA ++P ++ + G AL+++PTRELA Q
Sbjct: 121 KTGSGKTLALVIP-VLEALWRAKWSPDYGLGALIISPTRELALQ 163
>AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical
protein Y71F9B.14 protein.
Length = 430
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -1
Query: 754 SPSPGLALF*EHHQTHTCYEHKMCVQNLQQLAEFVVL 644
+P PGL L +HH +HT +H +C+Q + A VL
Sbjct: 18 NPKPGLILG-DHHISHTINQHHLCIQKKRLKAGTTVL 53
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 31.5 bits (68), Expect = 0.66
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +1
Query: 526 TGSGKTLAYILPAI-VHINNQP---PIRRGDGPIALVLAPTRELAQQI 657
TG GKT A+++PAI + + +P I P L+LA T L +Q+
Sbjct: 138 TGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQL 185
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 31.1 bits (67), Expect = 0.88
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 98 VETVVPNLEEATNSAIIRLDLATVAVDLEDLEDLVGKKN 214
+ETV+ LE N +RL+ A VA E LE + GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/79 (24%), Positives = 41/79 (51%)
Frame = +1
Query: 517 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 696
+ ++G+GKTL + + A+ ++++ R +++ PTRE++ QI++ T
Sbjct: 65 QAKSGTGKTLVFSVLAVENLDS-----RSSHIQKVIVTPTREISVQIKETVRKVAPTG-A 118
Query: 697 RNTCVFGGAPKREQARDLE 753
R + GG+ + DL+
Sbjct: 119 RTSVYVGGSAHKLNLIDLK 137
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/79 (24%), Positives = 41/79 (51%)
Frame = +1
Query: 517 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 696
+ ++G+GKTL + + A+ ++++ R +++ PTRE++ QI++ T
Sbjct: 65 QAKSGTGKTLVFSVLAVENLDS-----RSSHIQKVIVTPTREISVQIKETVRKVAPTG-A 118
Query: 697 RNTCVFGGAPKREQARDLE 753
R + GG+ + DL+
Sbjct: 119 RTSVYVGGSAHKLNLIDLK 137
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 526 TGSGKTLAYILPAIVH 573
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis
zeste white 10 (drosophila) homolog protein 1 protein.
Length = 778
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 659 SKLLQILDTHLMFVTRVCLVVLLKESK 739
+KLL LDT +FVTR C ++ K +K
Sbjct: 372 AKLLFTLDTDTIFVTRRCFAIVSKANK 398
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -3
Query: 509 ILSRHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLF 330
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+++F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 329 D 327
+
Sbjct: 86 N 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -3
Query: 509 ILSRHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLF 330
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+++F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 329 D 327
+
Sbjct: 86 N 86
>AF016427-5|AAB65357.2| 273|Caenorhabditis elegans Ground-like (grd
related) protein13 protein.
Length = 273
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 264 QPFNK-NFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNSIQ 392
QP++ +F P PT++++ PY Y H + + + HNS Q
Sbjct: 63 QPYSPVSFRPPPPTIIQQQPY----YSVPHPIPIQTQQFHNSYQ 102
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 150 RIIAEFVASSKFGTTVSTAIIPV 82
++I +FVA S G T+STA P+
Sbjct: 221 QLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 150 RIIAEFVASSKFGTTVSTAIIPV 82
++I +FVA S G T+STA P+
Sbjct: 130 QLIGDFVAGSLLGATISTAFFPL 152
>AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine
receptor, class t protein53 protein.
Length = 318
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/75 (25%), Positives = 34/75 (45%)
Frame = -3
Query: 500 RHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLFDFI 321
R S+RP + +R+ F+ L L+H+ I + +M +L IIS ++
Sbjct: 224 RKSFRPKRTARQRQIFLQAFLLCLIHLSASILYV-----VMQFIEVPKFLTIIS---QYL 275
Query: 320 W*SFENCRMWIIKVF 276
W + C + I +F
Sbjct: 276 WQLAQGCPVIIYLIF 290
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 291 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNSIQYFEEAN---FPDYVQQGVKTMG 449
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 291 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNSIQYFEEAN---FPDYVQQGVKTMG 449
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 221
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/68 (25%), Positives = 34/68 (50%)
Frame = +1
Query: 508 ISWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHT 687
++ ++Q GSGKT+ ++ + I+ + + ++LAP R +AQ+ + G
Sbjct: 36 VTIQSQAGSGKTVISLIDILQGIDCEDAHLQ-----VILLAPQRGMAQRAHEQLKSLGRN 90
Query: 688 SYVRNTCV 711
V TC+
Sbjct: 91 LNVNATCL 98
>U00031-8|AAK18869.1| 201|Caenorhabditis elegans Hypothetical
protein B0361.10 protein.
Length = 201
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 458 TDAYSSSRLADSYVWKELVGVLKRVPAKRWP 550
TDA R+A S++ + L RVPA +WP
Sbjct: 83 TDAEYQQRVAMSFLGRVLDDFTTRVPATQWP 113
>AF067945-16|AAC17675.1| 341|Caenorhabditis elegans Serpentine
receptor, class e (epsilon)protein 12 protein.
Length = 341
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -1
Query: 226 DLQRILFSHQILQILQIYCHRCQIETN-YR-RICCL 125
D +S I QI+ +CH+ +++TN +R RI CL
Sbjct: 268 DASIFFYSFAIPQIMTCFCHKWKVQTNTFRIRIGCL 303
>AF016654-8|AAB66025.2| 331|Caenorhabditis elegans Hypothetical
protein C17A2.1 protein.
Length = 331
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = +3
Query: 294 HPTVLKRSPYEVEEYRNNHEVTVSGVEVHNSIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 473
H + R+ +V ++ N + T+ +H + +E A F + +K + I
Sbjct: 213 HNKEISRTDKKVMKFINQVKSTLGTALIHLKLNIYEFAAFKSFCIWNIKFHKTSQTMRIV 272
Query: 474 AQGWPIAMSGKN*LAYSN 527
AQG +A+S + Y N
Sbjct: 273 AQGHYVAVSSALRVYYKN 290
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,754,407
Number of Sequences: 27780
Number of extensions: 354801
Number of successful extensions: 1077
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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