Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021044
(754 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 51 1e-08
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 3.1
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 3.1
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 3.1
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 3.1
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 21 9.4
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 21 9.4
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 9.4
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 21 9.4
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 21 9.4
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 50.8 bits (116), Expect = 1e-08
Identities = 24/59 (40%), Positives = 35/59 (59%)
Frame = +3
Query: 342 NNHEVTVSGVEVHNSIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
+N +V VSG V I+ FE A + V +K GYK+PTP+Q PI M+G++ +A
Sbjct: 180 DNIQVNVSGDNVPQPIESFEAAGLRNIVLDNIKKSGYKKPTPVQKHALPIIMNGRDLMA 238
Score = 36.7 bits (81), Expect = 2e-04
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Frame = +1
Query: 523 QTGSGKTLAYILPAIVHINNQPP----IRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 690
QTGSGKT A+ +P I + + P ++++PTREL QI Q F S
Sbjct: 241 QTGSGKTAAFAVPIINTLLERSVDLVVTSTYCEPQVVIVSPTRELTIQIWQQIVKFSLNS 300
Query: 691 YVRNTCVFGGAPKREQ 738
++ +GG Q
Sbjct: 301 ILKTVVAYGGTSVMHQ 316
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +2
Query: 461 DAYSSSRLADSYVWKELVGVLKRVPA 538
++ S + A +YVWK G L++ P+
Sbjct: 205 ESISYEQTAITYVWKNDEGTLRKSPS 230
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +2
Query: 461 DAYSSSRLADSYVWKELVGVLKRVPA 538
++ S + A +YVWK G L++ P+
Sbjct: 205 ESISYEQTAITYVWKNDEGTLRKSPS 230
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +2
Query: 461 DAYSSSRLADSYVWKELVGVLKRVPA 538
++ S + A +YVWK G L++ P+
Sbjct: 256 ESISYEQTAITYVWKNDEGTLRKSPS 281
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +2
Query: 461 DAYSSSRLADSYVWKELVGVLKRVPA 538
++ S + A +YVWK G L++ P+
Sbjct: 205 ESISYEQTAITYVWKNDEGTLRKSPS 230
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 21.4 bits (43), Expect = 9.4
Identities = 6/16 (37%), Positives = 8/16 (50%)
Frame = -2
Query: 249 PIWATHVLTSREFFFP 202
P+W H+ R FP
Sbjct: 634 PVWGRHIYDGRAMGFP 649
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 21.4 bits (43), Expect = 9.4
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 607 HHLSE*AVGCLCAQWLARCRPTFCRNPFEYA 515
+++SE V L + +PT N FEYA
Sbjct: 180 NYMSELTVDILLETAMGVSKPTRDHNAFEYA 210
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 83 TGIIAVETVVPNLEEATNSA 142
T + A V P +EE TN+A
Sbjct: 412 TALGAAALVAPGMEEPTNTA 431
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 21.4 bits (43), Expect = 9.4
Identities = 6/16 (37%), Positives = 8/16 (50%)
Frame = -2
Query: 249 PIWATHVLTSREFFFP 202
P+W H+ R FP
Sbjct: 634 PVWGRHIYDGRAMGFP 649
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 21.4 bits (43), Expect = 9.4
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = -1
Query: 748 SPGLALF*EHHQTHTCYEHKMCVQNLQQ 665
SP L HHQ HT + H Q Q
Sbjct: 160 SPPLVESQMHHQMHTQHPHMQPQQGQHQ 187
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,687
Number of Sequences: 438
Number of extensions: 4319
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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