Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021043
         (714 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        29   0.050
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.1  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   2.5  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    23   3.3  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    23   3.3  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   5.7  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.9  

>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 28.7 bits (61), Expect = 0.050
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -3

Query: 589 ARRDSKALIRLKAFRICFQSFAPGKRRRRGSV 494
           + R+    I L A R+CFQ F  G+RR + +V
Sbjct: 191 SHRNQPTSIDLNAVRLCFQVFLEGERRGKFTV 222


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +3

Query: 453  TIRPTAHQWSTQFTTEP 503
            T RPT   W TQ TT P
Sbjct: 1071 TTRPTTTNWPTQGTTIP 1087


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -1

Query: 708 LTIDFSFFIIPVVSL 664
           LTI F FFIIP++ L
Sbjct: 239 LTIIFLFFIIPLIIL 253


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 261 EDGSRDYFQYCHDQIGRQKMDIRV 190
           ED + DYF+ C D + +   D ++
Sbjct: 131 EDINMDYFKKCIDPVDKVLQDAKI 154


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 261 EDGSRDYFQYCHDQIGRQKMDIRV 190
           ED + DYF+ C D + +   D ++
Sbjct: 131 EDINMDYFKKCIDPVDKVLQDAKI 154


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 118 GGGSRHSYPKSGGFL 162
           GGG   +Y K  GFL
Sbjct: 354 GGGKEGTYTKESGFL 368


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 205 LLAAYLVMAILEVVTATIFWRLVW 276
           L++ Y   AILE+    IF   VW
Sbjct: 70  LISFYKSTAILEIAFEVIFIVTVW 93


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,337
Number of Sequences: 336
Number of extensions: 3618
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)