Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021043
         (714 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_51714| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.6  
SB_23925| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.8  
SB_52317| Best HMM Match : E-MAP-115 (HMM E-Value=1.4)                 28   6.5  
SB_37000| Best HMM Match : Astacin (HMM E-Value=5.5e-19)               28   6.5  
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.5  
SB_11109| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.5  
SB_29028| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.6  

>SB_51714| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 542

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +2

Query: 458 PPHGPPMVYPVYHGTPPPTFTRRKTLE 538
           PPH PP   PV    PPP     +TL+
Sbjct: 368 PPHSPPPPLPVIQLNPPPARPLERTLD 394


>SB_23925| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 217

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -3

Query: 637 VSACRWSGYARKPFQPARRDSKALIRLKAFRI 542
           +   RW    R P++P RRD   L R++ FR+
Sbjct: 53  IDRARWRTLER-PYEPCRRDEDRLYRIEKFRL 83


>SB_52317| Best HMM Match : E-MAP-115 (HMM E-Value=1.4)
          Length = 681

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +2

Query: 434 PPQKI-RYNPPHGPPMVYPVYHGTPPPTFTRRKTLE 538
           PP+ I RY+   GP  + P YHG   P  T R T E
Sbjct: 517 PPKNIARYHGNSGPQNIAP-YHGNSGPQKTSRLTTE 551


>SB_37000| Best HMM Match : Astacin (HMM E-Value=5.5e-19)
          Length = 1341

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +1

Query: 388 SINDPYHDTQPLSLQSPAKNKIQSAPRPTNGLPSLPRNPSAY 513
           S +D Y  ++P  LQSP   + +      +GLP  P  P+ +
Sbjct: 373 SRDDSYTKSKPKKLQSPRSTQHKDCGVHFSGLPPTPMEPNGF 414


>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 550

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +2

Query: 434 PPQKIRYNPPHGPPM-VYPVYHGTPPPTF 517
           PP  +R  PP  PPM +YP   G PPP F
Sbjct: 461 PPGGMRGMPP--PPMGMYPPPRGFPPPPF 487


>SB_11109| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 378

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +2

Query: 434 PPQKI-RYNPPHGPPMVYPVYHGTPPPTFTRRKTLE 538
           PP+ I RY+   GP  + P YHG   P  T R T E
Sbjct: 214 PPKNIARYHGNSGPQNIAP-YHGNSGPQKTSRLTTE 248


>SB_29028| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 714

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +1

Query: 424 SLQSPAKNKIQSAPRPTNGLPSLPRNPSAYVYQAQNSGS 540
           SL    K  +QS+P+ T+  PSLP  P+  V     + S
Sbjct: 599 SLPISMKQILQSSPKSTSWTPSLPTIPAGQVQLVHRTAS 637


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,926,196
Number of Sequences: 59808
Number of extensions: 459889
Number of successful extensions: 1537
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1529
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)