Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021043
         (714 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81546-1|CAB04449.2|  859|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z99942-1|CAB17068.2|  454|Caenorhabditis elegans Hypothetical pr...    29   3.3  
U46673-7|AAC48154.1|  811|Caenorhabditis elegans Beta-catenin/ar...    29   4.4  
AL034392-5|CAE17989.1|  134|Caenorhabditis elegans Hypothetical ...    29   4.4  
AF063646-1|AAC17424.1|  811|Caenorhabditis elegans beta-catenin/...    29   4.4  
Z70271-3|CAA94234.1|  358|Caenorhabditis elegans Hypothetical pr...    28   5.8  

>Z81546-1|CAB04449.2|  859|Caenorhabditis elegans Hypothetical
           protein F53A2.1 protein.
          Length = 859

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 7/73 (9%)
 Frame = -2

Query: 422 NGCVSWYGSLMDSYVLLKTGNRGY-------YSLYCHDQTCLLKTGSRDYLLCCHDQTSR 264
           N CV  Y S    +V +   +  Y       Y+ +     CL++   +  +  CHD+T +
Sbjct: 171 NSCVRDYRSTCPRHVTISLIDSSYGYLCNEGYNTFMESAECLMELDRKPSVKRCHDETLK 230

Query: 263 QKMVAVTTSSIAM 225
           +   A T S ++M
Sbjct: 231 EIESANTESGVSM 243


>Z99942-1|CAB17068.2|  454|Caenorhabditis elegans Hypothetical
           protein H13N06.2 protein.
          Length = 454

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +1

Query: 430 QSPAKNKIQSAP-RPTNGLPSLPRNPSAYVYQAQNSGS 540
           QSP  + + + P  PTN LP  P   +  +  A+NSG+
Sbjct: 63  QSPGTSPVTTTPVAPTNSLPMPPGTSTPSLSSAENSGN 100


>U46673-7|AAC48154.1|  811|Caenorhabditis elegans
           Beta-catenin/armadillo relatedprotein 1 protein.
          Length = 811

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
 Frame = +2

Query: 452 YNPP--HGPPMVYPVYHGTPPPTF 517
           YN P  H PP +YP Y   PP T+
Sbjct: 736 YNSPMYHSPPAMYPEYSIGPPETY 759


>AL034392-5|CAE17989.1|  134|Caenorhabditis elegans Hypothetical
           protein Y40B1A.5 protein.
          Length = 134

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = +2

Query: 446 IRYNPPHG--PPMVYPVYHGTPPP 511
           ++Y PPHG  PP   P Y+  PPP
Sbjct: 85  LQYPPPHGLGPPPPPPHYYTQPPP 108


>AF063646-1|AAC17424.1|  811|Caenorhabditis elegans
           beta-catenin/armadillo homologBAR-1 protein.
          Length = 811

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
 Frame = +2

Query: 452 YNPP--HGPPMVYPVYHGTPPPTF 517
           YN P  H PP +YP Y   PP T+
Sbjct: 736 YNSPMYHSPPAMYPEYSIGPPETY 759


>Z70271-3|CAA94234.1|  358|Caenorhabditis elegans Hypothetical
           protein W08D2.6 protein.
          Length = 358

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 412 TQPLSLQSPAKNKIQSAPRPTNGLPSLP 495
           T P S Q  A+NK ++ P+   G P LP
Sbjct: 130 TSPDSCQCQAENKCKAGPQGAKGAPGLP 157


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,945,098
Number of Sequences: 27780
Number of extensions: 329081
Number of successful extensions: 1151
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1146
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)