Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021042
(756 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0998 - 26742608-26742802,26743137-26743325,26743600-267436... 31 0.99
10_08_0950 + 21764902-21765912 31 1.3
04_01_0450 - 5840015-5840055,5840635-5840977,5841326-5841537,584... 31 1.3
02_03_0238 + 16730444-16730448,16730484-16730586,16732043-167320... 31 1.3
07_01_0395 + 2985513-2986018,2986227-2986268,2986494-2986521 30 1.7
01_05_0751 + 24904854-24905640,24905747-24905805 30 1.7
07_03_0332 + 16880184-16881017,16881334-16881462,16882685-168827... 30 2.3
02_05_1085 + 33989863-33991179 30 2.3
09_06_0198 - 21496692-21496991,21497111-21497258,21497341-214975... 29 3.0
08_01_0874 + 8575718-8576422,8576603-8576662,8576799-8576945,857... 29 3.0
07_01_0245 - 1803170-1803887,1803971-1804641 29 3.0
03_02_0517 + 9054816-9055655 29 3.0
06_03_1001 + 26817231-26818246,26818341-26818525,26818614-268189... 29 4.0
06_03_1122 - 27775141-27775333,27775414-27775604,27775907-277770... 29 5.3
04_01_0335 + 4409387-4410156,4410598-4410706 29 5.3
12_01_0018 + 132654-133304,133726-134265,134357-134436,134673-13... 28 7.0
11_06_0452 + 23774378-23775054,23775228-23775411,23775911-237759... 28 7.0
11_01_0019 + 135610-136296,136736-137275,137367-137518,137683-13... 28 7.0
07_01_0594 + 4428440-4429837 28 7.0
02_01_0377 + 2728892-2729187,2729483-2729544,2730516-2730570,273... 28 7.0
01_05_0739 + 24807181-24809121 28 7.0
11_01_0487 - 3763233-3763733,3763827-3764279,3765270-3765392,376... 28 9.2
07_01_0014 - 103808-103873,103925-104248 28 9.2
06_03_1283 - 28957729-28959258,28959354-28959550,28959824-289600... 28 9.2
06_03_0547 + 22001831-22002304 28 9.2
04_03_0271 - 13694669-13694770,13694859-13694999,13695258-136953... 28 9.2
04_03_0196 - 12533947-12534470,12536577-12537039,12537673-12537903 28 9.2
03_01_0397 + 3086142-3086489,3087097-3087252,3088043-3088201,308... 28 9.2
>06_03_0998 -
26742608-26742802,26743137-26743325,26743600-26743657,
26743990-26744056,26744368-26746504
Length = 881
Score = 31.1 bits (67), Expect = 0.99
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +2
Query: 350 EIHLQVNDP---VRTPVGIAGEQNEVITGEMGRPLVLRCLVYGYPTPEIFWYRGLNVPW 517
E+ ++VN P VR V +AG T MGRP ++ L+ T I WY G+ W
Sbjct: 503 ELKMRVNAPIELVRKAVKLAG-----FTNSMGRPRPIKLLICLDDTDIINWYAGVGRRW 556
>10_08_0950 + 21764902-21765912
Length = 336
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 343 PAGDPPASERSGEDAGRHRGRTKRSNNGGDGQTARLALPRVRIPDP 480
P+ + E + DAGR R +NGG G R +P+ P
Sbjct: 182 PSSEEDEEEEAAADAGRSRSLHGLISNGGSGSGLRFTIPKASRSKP 227
>04_01_0450 -
5840015-5840055,5840635-5840977,5841326-5841537,
5842381-5842477
Length = 230
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/23 (69%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +1
Query: 367 ERSGE-DAGRHRGRTKRSNNGGD 432
ERSGE DAGR GR RS GGD
Sbjct: 2 ERSGEGDAGRGDGRRLRSGQGGD 24
>02_03_0238 +
16730444-16730448,16730484-16730586,16732043-16732099,
16732198-16732346,16732450-16732545,16732620-16732695,
16732810-16732883,16732991-16733408
Length = 325
Score = 30.7 bits (66), Expect = 1.3
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 426 GRWADRSSCAASCTDTRP-RKSSGTEDLTSHGAIQQYIVRSQRKRSSNKTTDRRGARGIR 602
GR ++ AA+ T T+ SS + HGA ++ +RSS+ ++ RRG+R
Sbjct: 217 GRGRGNAALAAAETTTQLLTASSSSSSSYGHGAAGSRTA-AETQRSSSSSSSRRGSRRAD 275
Query: 603 VSSIQRRRKPGHVTDGGS 656
+ + Q R +DGG+
Sbjct: 276 MVAPQSRNSRFDDSDGGA 293
>07_01_0395 + 2985513-2986018,2986227-2986268,2986494-2986521
Length = 191
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = -2
Query: 491 RRFPGSGIRTRGSARRAVCPSPPLLLRFVLPRCRPASSPDRSLA 360
RR PGSG +A R + P P+L R R P+S PD ++A
Sbjct: 104 RRRPGSG--AAAAATRPLLPILPMLARGDRERALPSSRPDPAVA 145
>01_05_0751 + 24904854-24905640,24905747-24905805
Length = 281
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 438 DRSSCAASCTDTRPRKSSGTEDLTSHGAIQQYIVRSQRKRSSNKTTDRR 584
D S C+AS + S +ED +S +++ QR RS++ + + R
Sbjct: 46 DLSCCSASAPASSAESGSESEDYSSCAGESDFVISLQRSRSASPSYEER 94
>07_03_0332 +
16880184-16881017,16881334-16881462,16882685-16882750,
16883159-16883224,16884419-16884457,16884858-16885028
Length = 434
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +1
Query: 349 GDPPASERSGEDAGRHRGRTKRSNNGGDGQTARLALPRVRIPDPGNLLVQRT*RPM--VP 522
G ++ E+A G TK+S + T+ L +P+V++ D L Q+ P
Sbjct: 287 GGKEGKKKRSEEAAGSEGSTKKSKHEATSPTSSLKVPKVKLGDKITAL-QQIVSPFGKTD 345
Query: 523 YSSTLYEA 546
+S LYEA
Sbjct: 346 TASVLYEA 353
>02_05_1085 + 33989863-33991179
Length = 438
Score = 29.9 bits (64), Expect = 2.3
Identities = 22/72 (30%), Positives = 27/72 (37%)
Frame = +2
Query: 80 AARAASSPAGQSRNRTXXXXXXXXXXDAALYIPREHAAQDHLEERRNHYRRQRGPDARVS 259
AARAA+ G N T D +PR+ A L +R R R+
Sbjct: 45 AARAAAGVGGGGNNHTIAQRKILLDPDFTPRLPRQSALSLSLSQRNALPPRNADRFPRLP 104
Query: 260 DGTLEIVSLYRN 295
DG L IV N
Sbjct: 105 DGHLNIVLYVHN 116
>09_06_0198 - 21496692-21496991,21497111-21497258,21497341-21497578,
21497679-21497889,21497977-21498170,21498263-21498364,
21498525-21499879,21501193-21501494,21501600-21501750,
21501838-21502102,21502155-21502362,21502467-21502660,
21502749-21502850,21503481-21503680,21504010-21504846,
21505806-21506107,21506209-21506359,21506447-21506684,
21506764-21506971,21507078-21507271,21507322-21507462,
21513484-21514811,21515923-21516227,21516331-21516481,
21516570-21516807,21516881-21517088,21517197-21517366,
21517451-21517549,21517708-21519029,21521601-21521683
Length = 3314
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/54 (44%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Frame = +1
Query: 349 GDPPASERSGE-DAGRHRGRTKRSN----NGGDGQTARLALPRVRIPDPGNLLV 495
G PAS GE AGR G +R GGDG LALPR+++PD + LV
Sbjct: 2797 GFEPAS--GGEWSAGRFSGGCRRKEAPPCGGGDGF---LALPRMKVPDKFSTLV 2845
>08_01_0874 +
8575718-8576422,8576603-8576662,8576799-8576945,
8577390-8577527
Length = 349
Score = 29.5 bits (63), Expect = 3.0
Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 12/96 (12%)
Frame = +3
Query: 423 RGRWADRSSCAASCTDT--RPRKSSGTEDLTSHGAIQQYIVRSQRKRS-------SNKTT 575
R + R + A +C++T RPR+ + +DL H + V S RKRS S+ T
Sbjct: 77 RMAYGSRRNAAGTCSETGNRPRRETAGQDLLDH---LKERVNSSRKRSLSGGSSPSSSNT 133
Query: 576 DRRGARGIRVSSIQR---RRKPGHVTDGGSGVQTRR 674
G+ SI R R P DGG+ R
Sbjct: 134 SSAGSLSSSSRSISRQLHRSVPKTRKDGGTNGSNAR 169
>07_01_0245 - 1803170-1803887,1803971-1804641
Length = 462
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = -1
Query: 516 HGTLSPLYQKISGVGYPYTRQRKTSGLPISPVITSFCSPAMPTGVLTGSF 367
H + SP Y KI PY LP SP ++ +PA TG L +F
Sbjct: 32 HPSTSPCYCKIRLNKLPYQTADAPLLLPPSPEASAAPAPAPATGALAAAF 81
>03_02_0517 + 9054816-9055655
Length = 279
Score = 29.5 bits (63), Expect = 3.0
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 177 HGNMPPKITWRKGEITIDGSEGRTR 251
+G P ++TW +G+ +DG EGR R
Sbjct: 229 NGVGPRRVTWPEGDGHVDGGEGRIR 253
>06_03_1001 +
26817231-26818246,26818341-26818525,26818614-26818917,
26819956-26820041,26820141-26820298,26820420-26820496,
26820586-26820652
Length = 630
Score = 29.1 bits (62), Expect = 4.0
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = -1
Query: 474 GYPYTRQRKTSGLPISPVITSFCSPAMPTGVLTGSFTCR-WISCWLMPNSFSAM--QM*T 304
G PY RK G P + P PT V+T W PN++S++ + +
Sbjct: 438 GSPYVAPRKKGGGADVPGLAEAAHPMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLVWS 497
Query: 303 PVSFRYSDTISSV 265
VSFR++ + S+
Sbjct: 498 LVSFRWNIQMPSI 510
>06_03_1122 -
27775141-27775333,27775414-27775604,27775907-27777099,
27777206-27777353,27777534-27777609,27777696-27777818,
27777886-27778050,27778169-27778259,27778580-27778664,
27778745-27778900,27778992-27779048,27779138-27779236,
27779381-27779499,27780145-27780202
Length = 917
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -2
Query: 431 SPPLLLRFVLPRCRPASSPDRSLAGGSPA 345
S P+ L+ VLP +P S PD S++ SP+
Sbjct: 588 SSPMTLQTVLPFSQPQSYPDTSMSSLSPS 616
>04_01_0335 + 4409387-4410156,4410598-4410706
Length = 292
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 346 AGDPPASERSGEDAGRHRGRTKRSNNGGDGQTARLAL 456
AGD PA+E G DA + +TK + +G+ + AL
Sbjct: 39 AGDRPAAETKGLDASQEGDQTKGLDGSQEGRGSESAL 75
>12_01_0018 +
132654-133304,133726-134265,134357-134436,134673-134949
Length = 515
Score = 28.3 bits (60), Expect = 7.0
Identities = 10/36 (27%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -3
Query: 547 WLRTMYCCMAP-WDVKSSVPEDFRGRVSVHEAAQDE 443
W C P WD ++ + +D +G ++H+ +DE
Sbjct: 437 WKEKKATCSCPLWDERNIIRDDPQGNAAIHDDPEDE 472
>11_06_0452 +
23774378-23775054,23775228-23775411,23775911-23775996,
23776116-23777010
Length = 613
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 480 RKSSGTEDLTSH--GAIQQYIVRSQRKRSSNKTTDRRGARGIRVSSIQRRRKPGHVTDGG 653
+K E+LT GAI ++I++ + SSN+T D+ A + + R + G T+
Sbjct: 18 KKKQRIEELTQSQKGAIDRFIIKESQVSSSNQTLDQAPALDRSIENNPRDDQTG--TENN 75
Query: 654 SGVQ 665
+ VQ
Sbjct: 76 AEVQ 79
>11_01_0019 +
135610-136296,136736-137275,137367-137518,137683-137959
Length = 551
Score = 28.3 bits (60), Expect = 7.0
Identities = 10/36 (27%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -3
Query: 547 WLRTMYCCMAP-WDVKSSVPEDFRGRVSVHEAAQDE 443
W C P WD ++ + +D +G ++H+ +DE
Sbjct: 473 WKEKKATCSCPLWDERNIIRDDPQGNAAIHDDPEDE 508
>07_01_0594 + 4428440-4429837
Length = 465
Score = 28.3 bits (60), Expect = 7.0
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Frame = -3
Query: 682 RAYRLVCTPEPPSVTWPGFLLRCMLDTRIPRAPRRSVVLLE-ERFLWLRTMYCCMAPWDV 506
R + P S+ W + L +DT A ++VL+ ER W + MY C WD
Sbjct: 320 RVDKFADAPRRESIRWARWWLA--VDTASSSAGGGALVLVATERRWWKQKMYMCAFRWDD 377
Query: 505 KSSV---PEDFRGR 473
+ P+D GR
Sbjct: 378 ELRFWRRPKDLGGR 391
>02_01_0377 +
2728892-2729187,2729483-2729544,2730516-2730570,
2730784-2730858,2730980-2731054,2731155-2731202,
2731548-2732357,2732450-2732498,2733157-2733266,
2733381-2733488,2733920-2733980
Length = 582
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/47 (31%), Positives = 18/47 (38%)
Frame = +1
Query: 343 PAGDPPASERSGEDAGRHRGRTKRSNNGGDGQTARLALPRVRIPDPG 483
P G P ++S E G GG G + P V IP PG
Sbjct: 479 PGGTPVMQQQSPEQQGPTPSELTPGAFGGQGSFVEMPTPPVLIPVPG 525
>01_05_0739 + 24807181-24809121
Length = 646
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = -1
Query: 546 GFVQCTAVWHHGTLSPLYQKISGVGYPYTRQRKTSGLPI-SPVITSFCSPAM--PTGVLT 376
G V CT V+ +S Y + +P+++ KT + SPVI+S +M P +
Sbjct: 189 GSVPCTWVFEKSVISSSYASEATYTFPFSKVPKTGDAAMSSPVISSTLVTSMKSPVACTS 248
Query: 375 GS 370
GS
Sbjct: 249 GS 250
>11_01_0487 -
3763233-3763733,3763827-3764279,3765270-3765392,
3765822-3766122,3766283-3766644,3767117-3767713,
3768323-3769447
Length = 1153
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 407 QNEVITGEMGRPLVLRCLVYGYPTPEI 487
Q E+G P+VLRC Y P E+
Sbjct: 886 QKRAFRAELGEPVVLRCQPYKIPLAEL 912
>07_01_0014 - 103808-103873,103925-104248
Length = 129
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 183 NMPPKITWRKGEITIDGSEGRT 248
+ PP+I WR G T+ EGRT
Sbjct: 70 SFPPQIRWRGGASTVVRPEGRT 91
>06_03_1283 -
28957729-28959258,28959354-28959550,28959824-28960026,
28960097-28960424,28960524-28960661,28960765-28961020,
28961529-28961626,28963104-28963367,28964395-28964584
Length = 1067
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = +2
Query: 227 RRQRGPDARVSDGTLEIVSLYRNDTGVYICIAENEFGISQQEIHLQVNDPVRTPVGI 397
+ + GP V DG + +L + D GV + ++ + + + L ND R P +
Sbjct: 583 KEKDGPTLMVGDGMNDAPALAKADVGVSMGVSGSAVAMETSHVALMSNDIRRIPKAV 639
>06_03_0547 + 22001831-22002304
Length = 157
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +1
Query: 352 DPPASERSGEDAGRHRGRTKRSNNGGDGQTARLALPRVRIP 474
DPP + R RGRT S TARL++PR P
Sbjct: 114 DPPVGRWKSRRSPRRRGRTSAS-----AVTARLSIPRTENP 149
>04_03_0271 -
13694669-13694770,13694859-13694999,13695258-13695370,
13696253-13696304,13696538-13696660,13696985-13697091,
13697280-13697329,13698284-13698387,13698610-13698690,
13698829-13698913,13699370-13699446,13700587-13700676,
13701338-13701397,13701768-13701872,13701986-13702035,
13702174-13702280,13704735-13704805,13704916-13705144,
13705228-13705704,13705807-13706405
Length = 940
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +1
Query: 340 QPAGDPPASERSGEDAGRHRGRTKRSNNGGDGQTARLALPRV 465
Q A P A +G D+G G K S +GG G+ + +LPRV
Sbjct: 49 QQAWRPVAPATAGRDSGG-TGSGKSSVDGGVGRASHDSLPRV 89
>04_03_0196 - 12533947-12534470,12536577-12537039,12537673-12537903
Length = 405
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 346 AGDPPASERSGEDAGRHRGRTKRSNNGGDGQT 441
AG A R+ HR R +R NG DG++
Sbjct: 115 AGQNSAGGRASSSRQPHRSRRERDGNGSDGKS 146
>03_01_0397 +
3086142-3086489,3087097-3087252,3088043-3088201,
3088305-3088388,3089266-3089348,3089486-3089531,
3089825-3089912,3090009-3090178,3090317-3090430,
3090497-3090604,3090987-3091202
Length = 523
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 340 QPAGDPPASERSGEDAGRHRGRTKRSNNGGDGQTA 444
+ AGD A+E +G+ RG+ K+ NGG A
Sbjct: 14 EEAGDKAAAEEAGDGFQVVRGKKKKRPNGGSASGA 48
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,664,940
Number of Sequences: 37544
Number of extensions: 514446
Number of successful extensions: 2108
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2104
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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