Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021039
(758 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC043406-1|AAH43406.1| 583|Homo sapiens NudC domain containing ... 62 3e-09
BC000967-1|AAH00967.2| 583|Homo sapiens NudC domain containing ... 62 3e-09
AK027897-1|BAB55439.1| 583|Homo sapiens protein ( Homo sapiens ... 62 3e-09
AF283301-1|AAK73017.1| 583|Homo sapiens chronic myelogenous leu... 62 3e-09
AF521133-1|AAQ08823.1| 554|Homo sapiens tumor antigen CML66 sho... 33 0.85
AF283302-1|AAM69373.1| 554|Homo sapiens chronic myelogenous leu... 33 0.85
BC031258-1|AAH31258.1| 496|Homo sapiens NUDCD1 protein protein. 31 4.5
BC036115-1|AAH36115.1| 518|Homo sapiens KIAA1919 protein. 31 6.0
AL080317-1|CAI19190.1| 518|Homo sapiens KIAA1919 protein. 31 6.0
AB067506-1|BAB67812.1| 403|Homo sapiens KIAA1919 protein protein. 31 6.0
AF161363-1|AAF28923.1| 96|Homo sapiens HSPC100 protein. 30 7.9
>BC043406-1|AAH43406.1| 583|Homo sapiens NudC domain containing 1
protein.
Length = 583
Score = 61.7 bits (143), Expect = 3e-09
Identities = 32/75 (42%), Positives = 46/75 (61%)
Frame = +2
Query: 5 LLELDFEGYKLNLQALPHYSLELASPVDKVYPDDVQYSFVHAKLFALHNHLVLDYWDYSF 184
LL+ FEGYKL+L+ LP Y LEL + V +V D QY+ H F ++N+L D W Y
Sbjct: 15 LLDPRFEGYKLSLEPLPCYQLELDAAVAEVKLRDDQYTLEHMHAFGMYNYLHCDSW-YQD 73
Query: 185 NYYYIDKNQQVRHVT 229
+ YYID ++ ++T
Sbjct: 74 SVYYIDTLGRIMNLT 88
Score = 31.1 bits (67), Expect = 4.5
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Frame = +3
Query: 489 NTREEKYETLHCLLQSVQQNEKH--FESVLTWVSF---DNDGESWKQMSFRQVQGKGIVH 653
N E TL ++ + + K F L WV+ + D + ++ + ++GK + H
Sbjct: 174 NAEEHSIATLLLRIEKEELDMKGSGFYVSLEWVTISKKNQDNKKYEIIKRDILRGKSVPH 233
Query: 654 YAAIETSCSALYVASDNIFKF 716
YAAIE + L + S F F
Sbjct: 234 YAAIEPDGNGLMIVSYKSFTF 254
>BC000967-1|AAH00967.2| 583|Homo sapiens NudC domain containing 1
protein.
Length = 583
Score = 61.7 bits (143), Expect = 3e-09
Identities = 32/75 (42%), Positives = 46/75 (61%)
Frame = +2
Query: 5 LLELDFEGYKLNLQALPHYSLELASPVDKVYPDDVQYSFVHAKLFALHNHLVLDYWDYSF 184
LL+ FEGYKL+L+ LP Y LEL + V +V D QY+ H F ++N+L D W Y
Sbjct: 15 LLDPRFEGYKLSLEPLPCYQLELDAAVAEVKLRDDQYTLEHMHAFGMYNYLHCDSW-YQD 73
Query: 185 NYYYIDKNQQVRHVT 229
+ YYID ++ ++T
Sbjct: 74 SVYYIDTLGRIMNLT 88
Score = 31.1 bits (67), Expect = 4.5
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Frame = +3
Query: 489 NTREEKYETLHCLLQSVQQNEKH--FESVLTWVSF---DNDGESWKQMSFRQVQGKGIVH 653
N E TL ++ + + K F L WV+ + D + ++ + ++GK + H
Sbjct: 174 NAEEHSIATLLLRIEKEELDMKGSGFYVSLEWVTISKKNQDNKKYEIIKRDILRGKSVPH 233
Query: 654 YAAIETSCSALYVASDNIFKF 716
YAAIE + L + S F F
Sbjct: 234 YAAIEPDGNGLMIVSYKSFTF 254
>AK027897-1|BAB55439.1| 583|Homo sapiens protein ( Homo sapiens
cDNA FLJ14991 fis, clone Y79AA1001781. ).
Length = 583
Score = 61.7 bits (143), Expect = 3e-09
Identities = 32/75 (42%), Positives = 46/75 (61%)
Frame = +2
Query: 5 LLELDFEGYKLNLQALPHYSLELASPVDKVYPDDVQYSFVHAKLFALHNHLVLDYWDYSF 184
LL+ FEGYKL+L+ LP Y LEL + V +V D QY+ H F ++N+L D W Y
Sbjct: 15 LLDPRFEGYKLSLEPLPCYQLELDAAVAEVKLRDDQYTLEHMHAFGMYNYLHCDSW-YQD 73
Query: 185 NYYYIDKNQQVRHVT 229
+ YYID ++ ++T
Sbjct: 74 SVYYIDTLGRIMNLT 88
>AF283301-1|AAK73017.1| 583|Homo sapiens chronic myelogenous
leukemia tumor antigen 66 protein.
Length = 583
Score = 61.7 bits (143), Expect = 3e-09
Identities = 32/75 (42%), Positives = 46/75 (61%)
Frame = +2
Query: 5 LLELDFEGYKLNLQALPHYSLELASPVDKVYPDDVQYSFVHAKLFALHNHLVLDYWDYSF 184
LL+ FEGYKL+L+ LP Y LEL + V +V D QY+ H F ++N+L D W Y
Sbjct: 15 LLDPRFEGYKLSLEPLPCYQLELDAAVAEVKLRDDQYTLEHMHAFGMYNYLHCDSW-YQD 73
Query: 185 NYYYIDKNQQVRHVT 229
+ YYID ++ ++T
Sbjct: 74 SVYYIDTLGRIMNLT 88
Score = 31.1 bits (67), Expect = 4.5
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Frame = +3
Query: 489 NTREEKYETLHCLLQSVQQNEKH--FESVLTWVSF---DNDGESWKQMSFRQVQGKGIVH 653
N E TL ++ + + K F L WV+ + D + ++ + ++GK + H
Sbjct: 174 NAEEHSIATLLLRIEKEELDMKGSGFYVSLEWVTISKKNQDNKKYEIIKRDILRGKSVPH 233
Query: 654 YAAIETSCSALYVASDNIFKF 716
YAAIE + L + S F F
Sbjct: 234 YAAIEPDGNGLMIVSYKSFTF 254
>AF521133-1|AAQ08823.1| 554|Homo sapiens tumor antigen CML66 short
form protein.
Length = 554
Score = 33.5 bits (73), Expect = 0.85
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 104 DVQYSFVHAKLFALHNHLVLDYWDYSFNYYYIDKNQQVRHVT 229
D QY+ H F ++N+L D W Y + YYID ++ ++T
Sbjct: 19 DDQYTLEHMHAFGMYNYLHCDSW-YQDSVYYIDTLGRIMNLT 59
Score = 31.1 bits (67), Expect = 4.5
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Frame = +3
Query: 489 NTREEKYETLHCLLQSVQQNEKH--FESVLTWVSF---DNDGESWKQMSFRQVQGKGIVH 653
N E TL ++ + + K F L WV+ + D + ++ + ++GK + H
Sbjct: 145 NAEEHSIATLLLRIEKEELDMKGSGFYVSLEWVTISKKNQDNKKYEIIKRDILRGKSVPH 204
Query: 654 YAAIETSCSALYVASDNIFKF 716
YAAIE + L + S F F
Sbjct: 205 YAAIEPDGNGLMIVSYKSFTF 225
>AF283302-1|AAM69373.1| 554|Homo sapiens chronic myelogenous
leukemia tumor antigen 66 short form protein.
Length = 554
Score = 33.5 bits (73), Expect = 0.85
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 104 DVQYSFVHAKLFALHNHLVLDYWDYSFNYYYIDKNQQVRHVT 229
D QY+ H F ++N+L D W Y + YYID ++ ++T
Sbjct: 19 DDQYTLEHMHAFGMYNYLHCDSW-YQDSVYYIDTLGRIMNLT 59
Score = 31.1 bits (67), Expect = 4.5
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Frame = +3
Query: 489 NTREEKYETLHCLLQSVQQNEKH--FESVLTWVSF---DNDGESWKQMSFRQVQGKGIVH 653
N E TL ++ + + K F L WV+ + D + ++ + ++GK + H
Sbjct: 145 NAEEHSIATLLLRIEKEELDMKGSGFYVSLEWVTISKKNQDNKKYEIIKRDILRGKSVPH 204
Query: 654 YAAIETSCSALYVASDNIFKF 716
YAAIE + L + S F F
Sbjct: 205 YAAIEPDGNGLMIVSYKSFTF 225
>BC031258-1|AAH31258.1| 496|Homo sapiens NUDCD1 protein protein.
Length = 496
Score = 31.1 bits (67), Expect = 4.5
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Frame = +3
Query: 489 NTREEKYETLHCLLQSVQQNEKH--FESVLTWVSF---DNDGESWKQMSFRQVQGKGIVH 653
N E TL ++ + + K F L WV+ + D + ++ + ++GK + H
Sbjct: 87 NAEEHSIATLLLRIEKEELDMKGSGFYVSLEWVTISKKNQDNKKYEIIKRDILRGKSVPH 146
Query: 654 YAAIETSCSALYVASDNIFKF 716
YAAIE + L + S F F
Sbjct: 147 YAAIEPDGNGLMIVSYKSFTF 167
>BC036115-1|AAH36115.1| 518|Homo sapiens KIAA1919 protein.
Length = 518
Score = 30.7 bits (66), Expect = 6.0
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +3
Query: 498 EEKYETLHCLLQSVQQNEKHFESVLTWVSFDNDGESWKQMSFRQVQGKGIVHYAAIETSC 677
+ K E LL S NE E+ + D E W +M F ++ + ++ IETS
Sbjct: 419 DRKSEDQKALLSSSGLNEYEEENE------EEDAEKWNEMDFEMIETNDTMRHSIIETSR 472
Query: 678 SAL 686
S+L
Sbjct: 473 SSL 475
>AL080317-1|CAI19190.1| 518|Homo sapiens KIAA1919 protein.
Length = 518
Score = 30.7 bits (66), Expect = 6.0
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +3
Query: 498 EEKYETLHCLLQSVQQNEKHFESVLTWVSFDNDGESWKQMSFRQVQGKGIVHYAAIETSC 677
+ K E LL S NE E+ + D E W +M F ++ + ++ IETS
Sbjct: 419 DRKSEDQKALLSSSGLNEYEEENE------EEDAEKWNEMDFEMIETNDTMRHSIIETSR 472
Query: 678 SAL 686
S+L
Sbjct: 473 SSL 475
>AB067506-1|BAB67812.1| 403|Homo sapiens KIAA1919 protein protein.
Length = 403
Score = 30.7 bits (66), Expect = 6.0
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +3
Query: 498 EEKYETLHCLLQSVQQNEKHFESVLTWVSFDNDGESWKQMSFRQVQGKGIVHYAAIETSC 677
+ K E LL S NE E+ + D E W +M F ++ + ++ IETS
Sbjct: 304 DRKSEDQKALLSSSGLNEYEEENE------EEDAEKWNEMDFEMIETNDTMRHSIIETSR 357
Query: 678 SAL 686
S+L
Sbjct: 358 SSL 360
>AF161363-1|AAF28923.1| 96|Homo sapiens HSPC100 protein.
Length = 96
Score = 30.3 bits (65), Expect = 7.9
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 588 DNDGESWKQMSFRQVQGKGIVHYAAIETSCSAL 686
+ D E W +M F ++ + ++ IETS S+L
Sbjct: 21 EEDAEKWNEMDFEMIETNDTMRHSIIETSRSSL 53
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,887,398
Number of Sequences: 237096
Number of extensions: 2322330
Number of successful extensions: 10907
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 10679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10900
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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